RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 CDKN1BP46527 198 aa9.62□□□□□ -0.87
SGCA-201ENST00000262018 TMEM256Q8N2U0 113 aa9.62□□□□□ -0.87
SGCA-201ENST00000262018 RNF183Q96D59 192 aa9.62□□□□□ -0.87
SGCA-201ENST00000262018 CLUHP3Q96NS8 147 aa9.62□□□□□ -0.87
SGCA-201ENST00000262018 LAMTOR2Q9Y2Q5 125 aa9.62□□□□□ -0.87
SGCA-201ENST00000262018 AGRNO00468 2067 aa9.61□□□□□ -0.87
SGCA-201ENST00000262018 HSBP1O75506 76 aa9.61□□□□□ -0.87
SGCA-201ENST00000262018 IGKV3-20P01619 116 aa9.61□□□□□ -0.87
SGCA-201ENST00000262018 PPBPP02775 128 aa9.61□□□□□ -0.87
SGCA-201ENST00000262018 DEFB135Q30KP9 77 aa9.61□□□□□ -0.87
SGCA-201ENST00000262018 ANXA2RQ3ZCQ2 193 aa9.61□□□□□ -0.87
SGCA-201ENST00000262018 TP53TG3Q9ULZ0 132 aa9.61□□□□□ -0.87
SGCA-201ENST00000262018 TP53TG1Q9Y2A0 90 aa9.61□□□□□ -0.87
SGCA-201ENST00000262018 IGHV4-4A0A075B6R2 117 aa9.6□□□□□ -0.87
SGCA-201ENST00000262018 NTF3P20783 257 aa9.6□□□□□ -0.87
SGCA-201ENST00000262018 AMTP48728 403 aa9.6□□□□□ -0.87
SGCA-201ENST00000262018 NAGKQ9UJ70 344 aa9.6□□□□□ -0.87
SGCA-201ENST00000262018 TRAV12-3A0A0B4J271 114 aa9.59□□□□□ -0.87
SGCA-201ENST00000262018 M0R2Z0 102 aa9.59□□□□□ -0.87
SGCA-201ENST00000262018 ASIPP42127 132 aa9.59□□□□□ -0.87
SGCA-201ENST00000262018 CACNG7P62955 275 aa9.59□□□□□ -0.87
SGCA-201ENST00000262018 ZNF124Q15973 351 aa9.59□□□□□ -0.87
SGCA-201ENST00000262018 SPINK13Q1W4C9 94 aa9.59□□□□□ -0.87
SGCA-201ENST00000262018 TDRG1Q3Y452 100 aa9.59□□□□□ -0.87
SGCA-201ENST00000262018 MUC21Q5SSG8 566 aa9.59□□□□□ -0.87
SGCA-201ENST00000262018 Q6ZWC4 215 aa9.59□□□□□ -0.87
SGCA-201ENST00000262018 HSPG2P98160 4391 aa9.59□□□□□ -0.87
SGCA-201ENST00000262018 MUC21A0A0G2JKD1 596 aa9.58□□□□□ -0.88
SGCA-201ENST00000262018 MUC21A0A140T8X8 626 aa9.58□□□□□ -0.88
SGCA-201ENST00000262018 SCGB1D1O95968 90 aa9.58□□□□□ -0.88
SGCA-201ENST00000262018 LINC00310P59036 64 aa9.58□□□□□ -0.88
SGCA-201ENST00000262018 TWIST1Q15672 202 aa9.58□□□□□ -0.88
SGCA-201ENST00000262018 PMCHL1Q16048 86 aa9.58□□□□□ -0.88
SGCA-201ENST00000262018 LBHQ53QV2 105 aaPredicted RBP9.58□□□□□ -0.88
SGCA-201ENST00000262018 FAM104BQ5XKR9 115 aa9.58□□□□□ -0.88
SGCA-201ENST00000262018 TMEM191AQ9H0A3 160 aa9.58□□□□□ -0.88
SGCA-201ENST00000262018 SCRT2Q9NQ03 307 aa9.58□□□□□ -0.88
SGCA-201ENST00000262018 TRAV12-2A0A075B6T6 113 aa9.57□□□□□ -0.88
SGCA-201ENST00000262018 H3BVH4 76 aa9.57□□□□□ -0.88
SGCA-201ENST00000262018 CRXO43186 299 aaPredicted RBP9.57□□□□□ -0.88
SGCA-201ENST00000262018 GNRH2O43555 120 aa9.57□□□□□ -0.88
SGCA-201ENST00000262018 NANOS2P60321 138 aaKnown RBP9.57□□□□□ -0.88
SGCA-201ENST00000262018 FAM159AQ6UWV7 190 aa9.57□□□□□ -0.88
SGCA-201ENST00000262018 SMIM15Q7Z3B0 74 aa9.57□□□□□ -0.88
SGCA-201ENST00000262018 MRPL52Q86TS9 123 aaKnown RBP9.57□□□□□ -0.88
SGCA-201ENST00000262018 OR10AG1Q8NH19 301 aa9.57□□□□□ -0.88
SGCA-201ENST00000262018 C20orf202A1L168 122 aa9.56□□□□□ -0.88
SGCA-201ENST00000262018 RTL8CO15255 209 aa9.56□□□□□ -0.88
SGCA-201ENST00000262018 RNASE3P12724 160 aaKnown RBP9.56□□□□□ -0.88
SGCA-201ENST00000262018 S100A4P26447 101 aaKnown RBP9.56□□□□□ -0.88
SGCA-201ENST00000262018 APOC4P55056 127 aa9.56□□□□□ -0.88
SGCA-201ENST00000262018 TCTAP57738 103 aa9.56□□□□□ -0.88
SGCA-201ENST00000262018 MAPKAPK5-AS1Q8N8E1 139 aa9.56□□□□□ -0.88
SGCA-201ENST00000262018 MSRB1Q9NZV6 116 aa9.56□□□□□ -0.88
SGCA-201ENST00000262018 IGHV1OR15-1A0A075B7D0 117 aa9.56□□□□□ -0.88
SGCA-201ENST00000262018 LINC00614P0C842 121 aa9.56□□□□□ -0.88
SGCA-201ENST00000262018 FXYD7P58549 80 aa9.56□□□□□ -0.88
SGCA-201ENST00000262018 SSTP61278 116 aa9.56□□□□□ -0.88
SGCA-201ENST00000262018 SPANXN1Q5VSR9 72 aa9.56□□□□□ -0.88
SGCA-201ENST00000262018 TEX43Q6ZNM6 134 aa9.56□□□□□ -0.88
SGCA-201ENST00000262018 TRPT1Q86TN4 253 aaKnown RBP9.56□□□□□ -0.88
SGCA-201ENST00000262018 ORMDL3Q8N138 153 aa9.56□□□□□ -0.88
SGCA-201ENST00000262018 APLNQ9ULZ1 77 aa9.56□□□□□ -0.88
SGCA-201ENST00000262018 PKD1P98161 4303 aa9.55□□□□□ -0.88
SGCA-201ENST00000262018 IGLL5B9A064 214 aa9.55□□□□□ -0.88
SGCA-201ENST00000262018 NUPR1O60356 82 aa9.55□□□□□ -0.88
SGCA-201ENST00000262018 STHQ8IWL8 128 aa9.55□□□□□ -0.88
SGCA-201ENST00000262018 AMN1Q8IY45 258 aa9.55□□□□□ -0.88
SGCA-201ENST00000262018 C11orf45Q8TAV5 145 aa9.55□□□□□ -0.88
SGCA-201ENST00000262018 C20orf144Q9BQM9 153 aa9.55□□□□□ -0.88
SGCA-201ENST00000262018 HSPB8Q9UJY1 196 aa9.55□□□□□ -0.88
SGCA-201ENST00000262018 NXPH4O95158 308 aa9.54□□□□□ -0.88
SGCA-201ENST00000262018 RBMY1A1P0DJD3 496 aaKnown RBP9.54□□□□□ -0.88
SGCA-201ENST00000262018 RBMY1CP0DJD4 496 aa9.54□□□□□ -0.88
SGCA-201ENST00000262018 DDTP30046 118 aa9.54□□□□□ -0.88
SGCA-201ENST00000262018 RBMY1FQ15415 496 aaKnown RBP9.54□□□□□ -0.88
SGCA-201ENST00000262018 MRPL51Q4U2R6 128 aaKnown RBP9.54□□□□□ -0.88
SGCA-201ENST00000262018 RNF185Q96GF1 192 aa9.54□□□□□ -0.88
SGCA-201ENST00000262018 IGHV3-16A0A0C4DH30 117 aa9.53□□□□□ -0.88
SGCA-201ENST00000262018 KIR2DL5BA0A0G2JN68 375 aa9.53□□□□□ -0.88
SGCA-201ENST00000262018 KIR2DL5BA0A0G2JPC4 375 aa9.53□□□□□ -0.88
SGCA-201ENST00000262018 BTF3P20290 206 aaKnown RBP9.53□□□□□ -0.88
SGCA-201ENST00000262018 RNASEKQ6P5S7 137 aaKnown RBP9.53□□□□□ -0.88
SGCA-201ENST00000262018 NIT1Q86X76 327 aa9.53□□□□□ -0.88
SGCA-201ENST00000262018 KIR2DL5AQ8N109 375 aa9.53□□□□□ -0.88
SGCA-201ENST00000262018 C9orf85Q96MD7 179 aa9.53□□□□□ -0.88
SGCA-201ENST00000262018 LINC00467Q9BRT7 94 aa9.53□□□□□ -0.88
SGCA-201ENST00000262018 AP5S1Q9NUS5 200 aa9.53□□□□□ -0.88
SGCA-201ENST00000262018 PHLDA3Q9Y5J5 127 aa9.53□□□□□ -0.88
SGCA-201ENST00000262018 TIMM8BQ9Y5J9 83 aaPredicted RBP9.53□□□□□ -0.88
SGCA-201ENST00000262018 TRGV11A0A075B6L2 103 aa9.52□□□□□ -0.89
SGCA-201ENST00000262018 M0R2N4 97 aa9.52□□□□□ -0.89
SGCA-201ENST00000262018 RPL35AP18077 110 aaKnown RBP9.52□□□□□ -0.89
SGCA-201ENST00000262018 KIR2DL5BQ8NHK3 375 aa9.52□□□□□ -0.89
SGCA-201ENST00000262018 VAMP8Q9BV40 100 aa9.52□□□□□ -0.89
SGCA-201ENST00000262018 D6R8Y8 96 aa9.51□□□□□ -0.89
SGCA-201ENST00000262018 PPP1R17O96001 155 aa9.51□□□□□ -0.89
SGCA-201ENST00000262018 INSP01308 110 aa9.51□□□□□ -0.89
SGCA-201ENST00000262018 EVI2AP22794 236 aa9.51□□□□□ -0.89
SGCA-201ENST00000262018 CTAG1AP78358 180 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms