RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 FAM223BA6NKX1 122 aa12.52□□□□□ -0.4
SREBF1-201ENST00000261646 PRSS47A8MTI9 375 aa12.52□□□□□ -0.4
SREBF1-201ENST00000261646 TCL1BO95988 128 aa12.52□□□□□ -0.4
SREBF1-201ENST00000261646 PIP4P1Q86T03 277 aa12.52□□□□□ -0.4
SREBF1-201ENST00000261646 FAM223AQ8IWN6 122 aa12.52□□□□□ -0.4
SREBF1-201ENST00000261646 A0A0J9YXV3 536 aa12.52□□□□□ -0.41
SREBF1-201ENST00000261646 DEFB1P60022 68 aa12.52□□□□□ -0.41
SREBF1-201ENST00000261646 ATP6V0E2Q8NHE4 81 aa12.52□□□□□ -0.41
SREBF1-201ENST00000261646 IGHV1-69DA0A0B4J2H0 117 aa12.51□□□□□ -0.41
SREBF1-201ENST00000261646 USMG5Q96IX5 58 aa12.51□□□□□ -0.41
SREBF1-201ENST00000261646 FANCD2OSQ96PS1 177 aa12.51□□□□□ -0.41
SREBF1-201ENST00000261646 UCNP55089 124 aa12.51□□□□□ -0.41
SREBF1-201ENST00000261646 RASL10AQ92737 203 aa12.51□□□□□ -0.41
SREBF1-201ENST00000261646 TRGV2A0A075B6R0 118 aa12.51□□□□□ -0.41
SREBF1-201ENST00000261646 PAX4O43316 350 aa12.51□□□□□ -0.41
SREBF1-201ENST00000261646 NDUFA11Q86Y39 141 aa12.51□□□□□ -0.41
SREBF1-201ENST00000261646 MYO15AQ9UKN7 3530 aa12.51□□□□□ -0.41
SREBF1-201ENST00000261646 RS1O15537 224 aa12.51□□□□□ -0.41
SREBF1-201ENST00000261646 IGHV7-81A0A0B4J1V7 117 aa12.5□□□□□ -0.41
SREBF1-201ENST00000261646 IGFL3Q6UXB1 125 aa12.5□□□□□ -0.41
SREBF1-201ENST00000261646 TOMM6Q96B49 74 aa12.5□□□□□ -0.41
SREBF1-201ENST00000261646 BPESC1Q9GZL8 116 aa12.5□□□□□ -0.41
SREBF1-201ENST00000261646 UBE2E1P51965 193 aa12.5□□□□□ -0.41
SREBF1-201ENST00000261646 RUSC1-AS1Q66K80 236 aa12.5□□□□□ -0.41
SREBF1-201ENST00000261646 GAS8-AS1O95177 125 aa12.49□□□□□ -0.41
SREBF1-201ENST00000261646 LENEPQ9Y5L5 61 aa12.49□□□□□ -0.41
SREBF1-201ENST00000261646 IGHV3-38A0A0C4DH36 116 aa12.49□□□□□ -0.41
SREBF1-201ENST00000261646 IGFL2Q6UWQ7 119 aa12.49□□□□□ -0.41
SREBF1-201ENST00000261646 IGHV3-53P01767 116 aa12.48□□□□□ -0.41
SREBF1-201ENST00000261646 LEPROTO15243 131 aa12.48□□□□□ -0.41
SREBF1-201ENST00000261646 IGHV3-16A0A0C4DH30 117 aa12.48□□□□□ -0.41
SREBF1-201ENST00000261646 AGRNO00468 2067 aa12.48□□□□□ -0.41
SREBF1-201ENST00000261646 IGHV1OR15-1A0A075B7D0 117 aa12.48□□□□□ -0.41
SREBF1-201ENST00000261646 Q71RC1 249 aaPredicted RBP12.48□□□□□ -0.41
SREBF1-201ENST00000261646 U3KQK5 164 aa12.48□□□□□ -0.41
SREBF1-201ENST00000261646 SUMO4Q6EEV6 95 aa12.47□□□□□ -0.41
SREBF1-201ENST00000261646 MRPL53Q96EL3 112 aaKnown RBP12.47□□□□□ -0.41
SREBF1-201ENST00000261646 RNF185Q96GF1 192 aa12.47□□□□□ -0.41
SREBF1-201ENST00000261646 MSRB2Q9Y3D2 182 aa12.47□□□□□ -0.41
SREBF1-201ENST00000261646 USP34Q70CQ2 3546 aa12.47□□□□□ -0.41
SREBF1-201ENST00000261646 NDUFA4O00483 81 aa12.47□□□□□ -0.41
SREBF1-201ENST00000261646 INAFM2P0DMQ5 153 aa12.47□□□□□ -0.41
SREBF1-201ENST00000261646 NPBQ8NG41 125 aa12.47□□□□□ -0.41
SREBF1-201ENST00000261646 PRO3102Q9H379 93 aa12.46□□□□□ -0.41
SREBF1-201ENST00000261646 SYNJ2BPP57105 145 aa12.46□□□□□ -0.41
SREBF1-201ENST00000261646 C11orf68Q9H3H3 251 aaKnown RBP12.46□□□□□ -0.41
SREBF1-201ENST00000261646 NAV2Q8IVL1 2488 aa12.46□□□□□ -0.42
SREBF1-201ENST00000261646 FRYLO94915 3013 aa12.46□□□□□ -0.42
SREBF1-201ENST00000261646 TRGV1A0A0A0MS02 117 aa12.45□□□□□ -0.42
SREBF1-201ENST00000261646 RPL36AP83881 106 aaKnown RBP12.45□□□□□ -0.42
SREBF1-201ENST00000261646 RPL36ALQ969Q0 106 aaKnown RBP12.45□□□□□ -0.42
SREBF1-201ENST00000261646 CCL19Q99731 98 aa12.45□□□□□ -0.42
SREBF1-201ENST00000261646 ZNF415Q09FC8 603 aa12.45□□□□□ -0.42
SREBF1-201ENST00000261646 CHCHD5Q9BSY4 110 aa12.45□□□□□ -0.42
SREBF1-201ENST00000261646 SPATA25Q9BR10 227 aa12.45□□□□□ -0.42
SREBF1-201ENST00000261646 DSCAMO60469 2012 aa12.44□□□□□ -0.42
SREBF1-201ENST00000261646 OPRPNQ99935 248 aaPredicted RBP12.44□□□□□ -0.42
SREBF1-201ENST00000261646 IGHG4P01861 327 aa12.44□□□□□ -0.42
SREBF1-201ENST00000261646 DEFB131AP59861 70 aa12.44□□□□□ -0.42
SREBF1-201ENST00000261646 JPT2Q9H910 190 aa12.44□□□□□ -0.42
SREBF1-201ENST00000261646 FAM236AA0A1B0GUQ0 79 aa12.44□□□□□ -0.42
SREBF1-201ENST00000261646 FAM236BA0A1B0GV22 79 aa12.44□□□□□ -0.42
SREBF1-201ENST00000261646 PIFOQ8TCI5 191 aa12.44□□□□□ -0.42
SREBF1-201ENST00000261646 Q8N1Y9 231 aa12.43□□□□□ -0.42
SREBF1-201ENST00000261646 C9orf47Q6ZRZ4 202 aa12.43□□□□□ -0.42
SREBF1-201ENST00000261646 HHLA3Q9XRX5 114 aa12.43□□□□□ -0.42
SREBF1-201ENST00000261646 XGP55808 180 aa12.43□□□□□ -0.42
SREBF1-201ENST00000261646 HERV-K104P63124 156 aa12.42□□□□□ -0.42
SREBF1-201ENST00000261646 RHOHQ15669 191 aa12.42□□□□□ -0.42
SREBF1-201ENST00000261646 STHQ8IWL8 128 aa12.42□□□□□ -0.42
SREBF1-201ENST00000261646 PIP4P2Q8N4L2 257 aa12.42□□□□□ -0.42
SREBF1-201ENST00000261646 ICOSQ9Y6W8 199 aa12.42□□□□□ -0.42
SREBF1-201ENST00000261646 A0A096LNJ9 63 aa12.42□□□□□ -0.42
SREBF1-201ENST00000261646 NDUFV3P56181 108 aaKnown RBP12.42□□□□□ -0.42
SREBF1-201ENST00000261646 TMEM86BQ8N661 226 aa12.42□□□□□ -0.42
SREBF1-201ENST00000261646 DAND5Q8N907 189 aa12.42□□□□□ -0.42
SREBF1-201ENST00000261646 HIVEP3Q5T1R4 2406 aa12.42□□□□□ -0.42
SREBF1-201ENST00000261646 NBEAQ8NFP9 2946 aa12.42□□□□□ -0.42
SREBF1-201ENST00000261646 Q8N9W7 124 aa12.42□□□□□ -0.42
SREBF1-201ENST00000261646 UBE2E2Q96LR5 201 aa12.42□□□□□ -0.42
SREBF1-201ENST00000261646 MGAQ8IWI9 3026 aa12.42□□□□□ -0.42
SREBF1-201ENST00000261646 TRBV10-2A0A0K0K1G8 114 aa12.41□□□□□ -0.42
SREBF1-201ENST00000261646 ZFYVE26Q68DK2 2539 aa12.41□□□□□ -0.42
SREBF1-201ENST00000261646 NEXN-AS1Q8NBZ9 246 aa12.41□□□□□ -0.42
SREBF1-201ENST00000261646 CLEC2BQ92478 149 aa12.41□□□□□ -0.42
SREBF1-201ENST00000261646 TRGV4A0A0C4DH28 118 aa12.4□□□□□ -0.42
SREBF1-201ENST00000261646 TEX49A0A1B0GTD5 131 aa12.4□□□□□ -0.42
SREBF1-201ENST00000261646 IGHV7-4-1A0A0J9YVY3 117 aa12.4□□□□□ -0.42
SREBF1-201ENST00000261646 CFAP126Q5VTH2 177 aa12.4□□□□□ -0.42
SREBF1-201ENST00000261646 BAALC-AS2P0C853 105 aa12.4□□□□□ -0.42
SREBF1-201ENST00000261646 SRSF2Q01130 221 aaKnown RBP12.4□□□□□ -0.42
SREBF1-201ENST00000261646 TIMM17AQ99595 171 aa12.4□□□□□ -0.42
SREBF1-201ENST00000261646 EXPH5Q8NEV8 1989 aa12.4□□□□□ -0.42
SREBF1-201ENST00000261646 A0A0J9YY99 117 aa12.4□□□□□ -0.43
SREBF1-201ENST00000261646 C11orf44Q8N8P7 122 aa12.4□□□□□ -0.43
SREBF1-201ENST00000261646 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.39□□□□□ -0.43
SREBF1-201ENST00000261646 IGKV2-29A2NJV5 120 aaPredicted RBP12.39□□□□□ -0.43
SREBF1-201ENST00000261646 K7ENP7 123 aa12.39□□□□□ -0.43
SREBF1-201ENST00000261646 Q9H8V8 135 aa12.39□□□□□ -0.43
SREBF1-201ENST00000261646 PEMTQ9UBM1 199 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms