RNA–Protein interactions for RNA: ENST00000261367.11

SNCAIP-201, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-201ENST00000261367 FANCD2OSQ96PS1 177 aa6.48□□□□□ -1.37
SNCAIP-201ENST00000261367 SHANK1Q9Y566 2161 aa6.48□□□□□ -1.37
SNCAIP-201ENST00000261367 ADAMTS20P59510 1910 aa6.48□□□□□ -1.37
SNCAIP-201ENST00000261367 IGHV3OR16-12A0A075B7B8 117 aa6.48□□□□□ -1.37
SNCAIP-201ENST00000261367 TRGV4A0A0C4DH28 118 aa6.48□□□□□ -1.37
SNCAIP-201ENST00000261367 TRBV7-7A0A0K0K1E9 115 aa6.48□□□□□ -1.37
SNCAIP-201ENST00000261367 H3BUA1 57 aa6.48□□□□□ -1.37
SNCAIP-201ENST00000261367 BSPH1Q075Z2 132 aa6.48□□□□□ -1.37
SNCAIP-201ENST00000261367 SHISA2Q6UWI4 295 aa6.48□□□□□ -1.37
SNCAIP-201ENST00000261367 KMT2EQ8IZD2 1858 aa6.48□□□□□ -1.37
SNCAIP-201ENST00000261367 CPAMD8Q8IZJ3 1885 aa6.48□□□□□ -1.37
SNCAIP-201ENST00000261367 NCOA6Q14686 2063 aaPredicted RBP6.48□□□□□ -1.37
SNCAIP-201ENST00000261367 C9orf47Q6ZRZ4 202 aa6.48□□□□□ -1.37
SNCAIP-201ENST00000261367 LST1O00453 97 aa6.48□□□□□ -1.37
SNCAIP-201ENST00000261367 UBE2D3P61077 147 aa6.48□□□□□ -1.37
SNCAIP-201ENST00000261367 UBE2D2P62837 147 aa6.48□□□□□ -1.37
SNCAIP-201ENST00000261367 RNASE6Q93091 150 aaKnown RBP6.48□□□□□ -1.37
SNCAIP-201ENST00000261367 AGPAT4-IT1Q9H0P7 198 aa6.48□□□□□ -1.37
SNCAIP-201ENST00000261367 CACNA1AO00555 2505 aa6.48□□□□□ -1.37
SNCAIP-201ENST00000261367 FER1L5A0AVI2 2057 aa6.47□□□□□ -1.37
SNCAIP-201ENST00000261367 CCL21O00585 134 aa6.47□□□□□ -1.37
SNCAIP-201ENST00000261367 PFN2P35080 140 aa6.47□□□□□ -1.37
SNCAIP-201ENST00000261367 UBE2E1P51965 193 aa6.47□□□□□ -1.37
SNCAIP-201ENST00000261367 SP5Q6BEB4 398 aaPredicted RBP6.47□□□□□ -1.37
SNCAIP-201ENST00000261367 HIST2H2BCQ6DN03 193 aa6.47□□□□□ -1.37
SNCAIP-201ENST00000261367 HIST2H2BDQ6DRA6 164 aa6.47□□□□□ -1.37
SNCAIP-201ENST00000261367 STHQ8IWL8 128 aa6.47□□□□□ -1.37
SNCAIP-201ENST00000261367 TMEM61Q8N0U2 210 aa6.47□□□□□ -1.37
SNCAIP-201ENST00000261367 RNF152Q8N8N0 203 aa6.47□□□□□ -1.37
SNCAIP-201ENST00000261367 U3KQE9 123 aa6.47□□□□□ -1.37
SNCAIP-201ENST00000261367 BUB3O43684 328 aa6.47□□□□□ -1.37
SNCAIP-201ENST00000261367 IGHV3-30P01768 117 aa6.47□□□□□ -1.37
SNCAIP-201ENST00000261367 IGHV3-30-5P0DP03 117 aa6.47□□□□□ -1.37
SNCAIP-201ENST00000261367 CLEC2BQ92478 149 aa6.47□□□□□ -1.37
SNCAIP-201ENST00000261367 UPK3BQ9BT76 320 aa6.47□□□□□ -1.37
SNCAIP-201ENST00000261367 RALGAPA1Q6GYQ0 2036 aa6.47□□□□□ -1.37
SNCAIP-201ENST00000261367 IGHV3OR16-8A0A075B7F1 116 aa6.47□□□□□ -1.37
SNCAIP-201ENST00000261367 I3L2K1 104 aa6.47□□□□□ -1.37
SNCAIP-201ENST00000261367 MYCNOSP40205 109 aa6.47□□□□□ -1.37
SNCAIP-201ENST00000261367 FAM222AQ5U5X8 452 aa6.47□□□□□ -1.37
SNCAIP-201ENST00000261367 VMO1Q7Z5L0 202 aa6.47□□□□□ -1.37
SNCAIP-201ENST00000261367 OPRPNQ99935 248 aaPredicted RBP6.47□□□□□ -1.37
SNCAIP-201ENST00000261367 DNAJC13O75165 2243 aa6.47□□□□□ -1.37
SNCAIP-201ENST00000261367 MYO18BQ8IUG5 2567 aa6.47□□□□□ -1.37
SNCAIP-201ENST00000261367 USP17L23D6RBM5 183 aa6.47□□□□□ -1.37
SNCAIP-201ENST00000261367 C20orf197Q8N268 126 aa6.47□□□□□ -1.37
SNCAIP-201ENST00000261367 NXPH4O95158 308 aa6.46□□□□□ -1.37
SNCAIP-201ENST00000261367 FUSP35637 526 aaKnown RBP eCLIP6.46□□□□□ -1.37
SNCAIP-201ENST00000261367 ATP5J2P56134 94 aa6.46□□□□□ -1.37
SNCAIP-201ENST00000261367 SPRR3Q9UBC9 169 aa6.46□□□□□ -1.37
SNCAIP-201ENST00000261367 PINLYPA6NC86 204 aa6.46□□□□□ -1.38
SNCAIP-201ENST00000261367 RHPN1-AS1Q9BWJ2 59 aa6.46□□□□□ -1.38
SNCAIP-201ENST00000261367 ZMAT4Q9H898 229 aa6.46□□□□□ -1.38
SNCAIP-201ENST00000261367 GATA1P15976 413 aaPredicted RBP6.46□□□□□ -1.38
SNCAIP-201ENST00000261367 SUMO4Q6EEV6 95 aa6.46□□□□□ -1.38
SNCAIP-201ENST00000261367 SND1-IT1Q9HBX3 110 aa6.46□□□□□ -1.38
SNCAIP-201ENST00000261367 MRPL36Q9P0J6 103 aaKnown RBP6.46□□□□□ -1.38
SNCAIP-201ENST00000261367 KAAG1Q9UBP8 84 aa6.46□□□□□ -1.38
SNCAIP-201ENST00000261367 DAZ2Q13117 558 aaKnown RBP6.46□□□□□ -1.38
SNCAIP-201ENST00000261367 DAZ4Q86SG3 579 aaKnown RBP6.46□□□□□ -1.38
SNCAIP-201ENST00000261367 ITLN2Q8WWU7 325 aaPredicted RBP6.46□□□□□ -1.38
SNCAIP-201ENST00000261367 DAZ3Q9NR90 486 aaKnown RBP6.46□□□□□ -1.38
SNCAIP-201ENST00000261367 COL5A1P20908 1838 aaPredicted RBP6.45□□□□□ -1.38
SNCAIP-201ENST00000261367 TRBV12-3P01733 135 aa6.45□□□□□ -1.38
SNCAIP-201ENST00000261367 LOXL1Q08397 574 aaPredicted RBP6.45□□□□□ -1.38
SNCAIP-201ENST00000261367 IGKV2D-26A0A0A0MRZ7 120 aa6.45□□□□□ -1.38
SNCAIP-201ENST00000261367 ICE1Q9Y2F5 2266 aa6.45□□□□□ -1.38
SNCAIP-201ENST00000261367 DOPEY2Q9Y3R5 2298 aa6.45□□□□□ -1.38
SNCAIP-201ENST00000261367 TRIAP1O43715 76 aa6.45□□□□□ -1.38
SNCAIP-201ENST00000261367 IGLV1-44P01699 117 aa6.45□□□□□ -1.38
SNCAIP-201ENST00000261367 UBE2D1P51668 147 aa6.45□□□□□ -1.38
SNCAIP-201ENST00000261367 PRR14LQ5THK1 2151 aa6.45□□□□□ -1.38
SNCAIP-201ENST00000261367 IGFL4Q6B9Z1 124 aa6.45□□□□□ -1.38
SNCAIP-201ENST00000261367 CDIP1Q9H305 208 aa6.45□□□□□ -1.38
SNCAIP-201ENST00000261367 BLCAPP62952 87 aa6.45□□□□□ -1.38
SNCAIP-201ENST00000261367 PI4KAP42356 2102 aa6.44□□□□□ -1.38
SNCAIP-201ENST00000261367 TMEM223A0PJW6 202 aa6.44□□□□□ -1.38
SNCAIP-201ENST00000261367 MAPKAPK5-AS1Q8N8E1 139 aa6.44□□□□□ -1.38
SNCAIP-201ENST00000261367 MGAQ8IWI9 3026 aa6.44□□□□□ -1.38
SNCAIP-201ENST00000261367 A0A0J9YXV3 536 aa6.44□□□□□ -1.38
SNCAIP-201ENST00000261367 MBD3L4A6NDZ8 208 aaPredicted RBP6.44□□□□□ -1.38
SNCAIP-201ENST00000261367 MBD3L3A6NE82 208 aaPredicted RBP6.44□□□□□ -1.38
SNCAIP-201ENST00000261367 MBD3L5A6NJ08 208 aaPredicted RBP6.44□□□□□ -1.38
SNCAIP-201ENST00000261367 INSL3P51460 131 aa6.44□□□□□ -1.38
SNCAIP-201ENST00000261367 MBD3L2Q8NHZ7 208 aaPredicted RBP6.44□□□□□ -1.38
SNCAIP-201ENST00000261367 SPRY4Q9C004 299 aa6.44□□□□□ -1.38
SNCAIP-201ENST00000261367 CACNA1DQ01668 2161 aa6.44□□□□□ -1.38
SNCAIP-201ENST00000261367 IGKV1OR2-108A0A075B7D4 117 aa6.44□□□□□ -1.38
SNCAIP-201ENST00000261367 HRCT1Q6UXD1 115 aa6.44□□□□□ -1.38
SNCAIP-201ENST00000261367 IGHV3-30-3P0DP02 117 aa6.44□□□□□ -1.38
SNCAIP-201ENST00000261367 HOXD3P31249 432 aaPredicted RBP6.44□□□□□ -1.38
SNCAIP-201ENST00000261367 MDS2Q8NDY4 140 aa6.44□□□□□ -1.38
SNCAIP-201ENST00000261367 CEP192Q8TEP8 1941 aa6.44□□□□□ -1.38
SNCAIP-201ENST00000261367 IGLV3-9A0A075B6K5 115 aa6.43□□□□□ -1.38
SNCAIP-201ENST00000261367 BCE1O60756 84 aa6.43□□□□□ -1.38
SNCAIP-201ENST00000261367 NSUN5P1Q3KNT7 163 aa6.43□□□□□ -1.38
SNCAIP-201ENST00000261367 TMEM263Q8WUH6 116 aaKnown RBP6.43□□□□□ -1.38
SNCAIP-201ENST00000261367 TEX22C9J3V5 150 aa6.43□□□□□ -1.38
SNCAIP-201ENST00000261367 IGKV1-17P01599 117 aa6.43□□□□□ -1.38
SNCAIP-201ENST00000261367 FAM27E3Q08E93 113 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 197.6 ms