RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 RBM3P98179 157 aaKnown RBP9.3□□□□□ -0.92
COL8A1-201ENST00000261037 IGLL5B9A064 214 aa9.3□□□□□ -0.92
COL8A1-201ENST00000261037 IGHG2P01859 326 aa9.3□□□□□ -0.92
COL8A1-201ENST00000261037 C9orf47Q6ZRZ4 202 aa9.3□□□□□ -0.92
COL8A1-201ENST00000261037 ODF3L1Q8IXM7 274 aa9.3□□□□□ -0.92
COL8A1-201ENST00000261037 RNF152Q8N8N0 203 aa9.3□□□□□ -0.92
COL8A1-201ENST00000261037 A4D1N5 150 aa9.3□□□□□ -0.92
COL8A1-201ENST00000261037 USF3Q68DE3 2245 aa9.3□□□□□ -0.92
COL8A1-201ENST00000261037 UNQ9165/PRO28630Q6UXU0 137 aa9.29□□□□□ -0.92
COL8A1-201ENST00000261037 FUSP35637 526 aaKnown RBP eCLIP9.29□□□□□ -0.92
COL8A1-201ENST00000261037 TDRG1Q3Y452 100 aa9.29□□□□□ -0.92
COL8A1-201ENST00000261037 IGLV2-14P01704 120 aa9.29□□□□□ -0.92
COL8A1-201ENST00000261037 FAM167A-AS1Q96KT0 104 aa9.29□□□□□ -0.92
COL8A1-201ENST00000261037 TRBV7-3A0A075B6L6 115 aa9.28□□□□□ -0.92
COL8A1-201ENST00000261037 VSIG2Q96IQ7 327 aa9.28□□□□□ -0.92
COL8A1-201ENST00000261037 OPRPNQ99935 248 aaPredicted RBP9.28□□□□□ -0.92
COL8A1-201ENST00000261037 MDFICQ9P1T7 246 aa9.28□□□□□ -0.92
COL8A1-201ENST00000261037 PLA2G5P39877 138 aa9.28□□□□□ -0.92
COL8A1-201ENST00000261037 DEFB125Q8N687 156 aa9.28□□□□□ -0.92
COL8A1-201ENST00000261037 CLEC2BQ92478 149 aa9.28□□□□□ -0.92
COL8A1-201ENST00000261037 TOMM6Q96B49 74 aa9.28□□□□□ -0.92
COL8A1-201ENST00000261037 KLK12Q9UKR0 248 aa9.28□□□□□ -0.92
COL8A1-201ENST00000261037 CHKB-CPT1BH3BT56 60 aa9.27□□□□□ -0.92
COL8A1-201ENST00000261037 ROS1P08922 2347 aa9.27□□□□□ -0.92
COL8A1-201ENST00000261037 NDUFA1O15239 70 aa9.27□□□□□ -0.93
COL8A1-201ENST00000261037 CEMP1Q6PRD7 247 aaPredicted RBP9.27□□□□□ -0.93
COL8A1-201ENST00000261037 MSMPQ1L6U9 139 aa9.27□□□□□ -0.93
COL8A1-201ENST00000261037 SIRPDQ9H106 197 aa9.27□□□□□ -0.93
COL8A1-201ENST00000261037 SS18L2Q9UHA2 77 aa9.27□□□□□ -0.93
COL8A1-201ENST00000261037 FRMD6-AS1P0C7T7 363 aa9.26□□□□□ -0.93
COL8A1-201ENST00000261037 RNF138Q8WVD3 245 aa9.26□□□□□ -0.93
COL8A1-201ENST00000261037 SPTBN1Q01082 2364 aaKnown RBP9.26□□□□□ -0.93
COL8A1-201ENST00000261037 DNAJC9-AS1A6NH13 148 aa9.26□□□□□ -0.93
COL8A1-201ENST00000261037 LINC01545Q5VT33 79 aa9.26□□□□□ -0.93
COL8A1-201ENST00000261037 TP53TG3Q9ULZ0 132 aa9.26□□□□□ -0.93
COL8A1-201ENST00000261037 FXYD2P54710 66 aa9.26□□□□□ -0.93
COL8A1-201ENST00000261037 TMEM61Q8N0U2 210 aa9.26□□□□□ -0.93
COL8A1-201ENST00000261037 EML6Q6ZMW3 1958 aa9.25□□□□□ -0.93
COL8A1-201ENST00000261037 PCNX2A6NKB5 2137 aa9.25□□□□□ -0.93
COL8A1-201ENST00000261037 P0DMU3 169 aa9.25□□□□□ -0.93
COL8A1-201ENST00000261037 FAM231AP0DMU4 169 aa9.25□□□□□ -0.93
COL8A1-201ENST00000261037 FAM231CP0DMU5 169 aa9.25□□□□□ -0.93
COL8A1-201ENST00000261037 WFDC9Q8NEX5 89 aa9.25□□□□□ -0.93
COL8A1-201ENST00000261037 MYCNOSP40205 109 aa9.25□□□□□ -0.93
COL8A1-201ENST00000261037 HIST2H2BDQ6DRA6 164 aa9.25□□□□□ -0.93
COL8A1-201ENST00000261037 FANCD2OSQ96PS1 177 aa9.25□□□□□ -0.93
COL8A1-201ENST00000261037 SPAG11BQ08648 103 aa9.24□□□□□ -0.93
COL8A1-201ENST00000261037 DAZAP2Q15038 168 aaPredicted RBP9.24□□□□□ -0.93
COL8A1-201ENST00000261037 TNRC6BQ9UPQ9 1833 aaKnown RBP9.24□□□□□ -0.93
COL8A1-201ENST00000261037 HIGD2BQ4VC39 106 aa9.24□□□□□ -0.93
COL8A1-201ENST00000261037 CADP27708 2225 aa9.24□□□□□ -0.93
COL8A1-201ENST00000261037 KIR2DL5BA0A0G2JN68 375 aa9.24□□□□□ -0.93
COL8A1-201ENST00000261037 KIR2DL5BA0A0G2JPC4 375 aa9.24□□□□□ -0.93
COL8A1-201ENST00000261037 KIR2DL5AQ8N109 375 aa9.24□□□□□ -0.93
COL8A1-201ENST00000261037 PKIGQ9Y2B9 76 aa9.24□□□□□ -0.93
COL8A1-201ENST00000261037 CACNA1GO43497 2377 aa9.24□□□□□ -0.93
COL8A1-201ENST00000261037 PKDREJQ9NTG1 2253 aa9.24□□□□□ -0.93
COL8A1-201ENST00000261037 LINC01548A6NM66 108 aa9.24□□□□□ -0.93
COL8A1-201ENST00000261037 LECT2O14960 151 aa9.24□□□□□ -0.93
COL8A1-201ENST00000261037 IGLV1-47P01700 117 aa9.24□□□□□ -0.93
COL8A1-201ENST00000261037 GPHB5Q86YW7 130 aa9.24□□□□□ -0.93
COL8A1-201ENST00000261037 MAP6D1Q9H9H5 199 aa9.24□□□□□ -0.93
COL8A1-201ENST00000261037 K7EMT4 169 aa9.23□□□□□ -0.93
COL8A1-201ENST00000261037 Q6ZSR3 168 aa9.23□□□□□ -0.93
COL8A1-201ENST00000261037 SMAD5-AS1Q9Y6J3 95 aa9.23□□□□□ -0.93
COL8A1-201ENST00000261037 OBSL1O75147 1896 aa9.23□□□□□ -0.93
COL8A1-201ENST00000261037 PRO3102Q9H379 93 aa9.23□□□□□ -0.93
COL8A1-201ENST00000261037 C11orf86A6NJI1 115 aa9.23□□□□□ -0.93
COL8A1-201ENST00000261037 NREPQ16612 68 aa9.23□□□□□ -0.93
COL8A1-201ENST00000261037 NFE4Q86UQ8 179 aa9.23□□□□□ -0.93
COL8A1-201ENST00000261037 A6NDX4 124 aa9.23□□□□□ -0.93
COL8A1-201ENST00000261037 B5MCH6 92 aa9.23□□□□□ -0.93
COL8A1-201ENST00000261037 C19orf84I3L1E1 186 aa9.23□□□□□ -0.93
COL8A1-201ENST00000261037 ADAMTS9Q9P2N4 1935 aa9.23□□□□□ -0.93
COL8A1-201ENST00000261037 DOCK10Q96BY6 2186 aa9.23□□□□□ -0.93
COL8A1-201ENST00000261037 MIR7-3HGQ8N6C7 128 aa9.22□□□□□ -0.93
COL8A1-201ENST00000261037 H0YGX0 51 aa9.22□□□□□ -0.93
COL8A1-201ENST00000261037 A0A0B4J2C4 111 aa9.22□□□□□ -0.93
COL8A1-201ENST00000261037 LGALS9O00182 355 aa9.22□□□□□ -0.93
COL8A1-201ENST00000261037 Q8NA96 180 aa9.22□□□□□ -0.93
COL8A1-201ENST00000261037 C14orf132Q9NPU4 83 aa9.22□□□□□ -0.93
COL8A1-201ENST00000261037 NBASA2RRP1 2371 aa9.22□□□□□ -0.93
COL8A1-201ENST00000261037 NDUFB1O75438 58 aa9.22□□□□□ -0.93
COL8A1-201ENST00000261037 TMEM258P61165 79 aa9.22□□□□□ -0.93
COL8A1-201ENST00000261037 SPATA25Q9BR10 227 aa9.21□□□□□ -0.93
COL8A1-201ENST00000261037 TM2D2Q9BX73 214 aa9.21□□□□□ -0.93
COL8A1-201ENST00000261037 TECTAO75443 2155 aa9.21□□□□□ -0.93
COL8A1-201ENST00000261037 LINC01620Q4KN68 170 aa9.21□□□□□ -0.93
COL8A1-201ENST00000261037 CCDC140Q96MF4 163 aa9.21□□□□□ -0.93
COL8A1-201ENST00000261037 Q6ZUT4 128 aa9.21□□□□□ -0.94
COL8A1-201ENST00000261037 SPANXDQ9BXN6 97 aa9.21□□□□□ -0.94
COL8A1-201ENST00000261037 IGKV2-24A0A0C4DH68 120 aa9.21□□□□□ -0.94
COL8A1-201ENST00000261037 PSMB8P28062 276 aa9.21□□□□□ -0.94
COL8A1-201ENST00000261037 CTRLP40313 264 aa9.2□□□□□ -0.94
COL8A1-201ENST00000261037 TMEM263Q8WUH6 116 aaKnown RBP9.2□□□□□ -0.94
COL8A1-201ENST00000261037 KLK5Q9Y337 293 aaPredicted RBP9.2□□□□□ -0.94
COL8A1-201ENST00000261037 A0A0J9YX75 114 aa9.2□□□□□ -0.94
COL8A1-201ENST00000261037 WFDC2Q14508 124 aa9.2□□□□□ -0.94
COL8A1-201ENST00000261037 SPRY4Q9C004 299 aa9.2□□□□□ -0.94
COL8A1-201ENST00000261037 A0A1B0GX51 115 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms