RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 COX8CQ7Z4L0 72 aa12.65□□□□□ -0.38
TM6SF1-201ENST00000258909 OR11H4Q8NGC9 324 aa12.65□□□□□ -0.38
TM6SF1-201ENST00000258909 NTN5Q8WTR8 489 aaPredicted RBP12.65□□□□□ -0.38
TM6SF1-201ENST00000258909 M0R381 172 aa12.64□□□□□ -0.39
TM6SF1-201ENST00000258909 LAGE3Q14657 143 aa12.64□□□□□ -0.39
TM6SF1-201ENST00000258909 PHLDA3Q9Y5J5 127 aa12.64□□□□□ -0.39
TM6SF1-201ENST00000258909 MYCBP2O75592 4640 aa12.63□□□□□ -0.39
TM6SF1-201ENST00000258909 A0A1B0GV50 99 aa12.63□□□□□ -0.39
TM6SF1-201ENST00000258909 LECT2O14960 151 aa12.63□□□□□ -0.39
TM6SF1-201ENST00000258909 ZNF674Q2M3X9 581 aa12.63□□□□□ -0.39
TM6SF1-201ENST00000258909 STOML3Q8TAV4 291 aa12.63□□□□□ -0.39
TM6SF1-201ENST00000258909 DMBT1Q9UGM3 2413 aaPredicted RBP12.63□□□□□ -0.39
TM6SF1-201ENST00000258909 RHODO00212 210 aa12.62□□□□□ -0.39
TM6SF1-201ENST00000258909 PAGE4O60829 102 aa12.62□□□□□ -0.39
TM6SF1-201ENST00000258909 LTAP01374 205 aa12.62□□□□□ -0.39
TM6SF1-201ENST00000258909 TPT1P13693 172 aaKnown RBP12.62□□□□□ -0.39
TM6SF1-201ENST00000258909 AKR1C3P42330 323 aa12.62□□□□□ -0.39
TM6SF1-201ENST00000258909 SFRP2Q96HF1 295 aa12.62□□□□□ -0.39
TM6SF1-201ENST00000258909 TM2D2Q9BX73 214 aa12.62□□□□□ -0.39
TM6SF1-201ENST00000258909 FLG2Q5D862 2391 aaPredicted RBP12.62□□□□□ -0.39
TM6SF1-201ENST00000258909 LINC01559Q495D7 138 aa12.61□□□□□ -0.39
TM6SF1-201ENST00000258909 FAM30AQ9NZY2 134 aa12.61□□□□□ -0.39
TM6SF1-201ENST00000258909 A0A087WWC5 75 aa12.6□□□□□ -0.39
TM6SF1-201ENST00000258909 TRBV6-1A0A0K0K1D8 114 aa12.6□□□□□ -0.39
TM6SF1-201ENST00000258909 SFT2D1Q8WV19 159 aa12.6□□□□□ -0.39
TM6SF1-201ENST00000258909 DNAJC30Q96LL9 226 aa12.6□□□□□ -0.39
TM6SF1-201ENST00000258909 TMEM70Q9BUB7 260 aa12.6□□□□□ -0.39
TM6SF1-201ENST00000258909 TRAV8-3A0A0A6YYJ7 113 aa12.59□□□□□ -0.39
TM6SF1-201ENST00000258909 KCNRGQ8N5I3 272 aa12.59□□□□□ -0.39
TM6SF1-201ENST00000258909 FAM213BQ8TBF2 198 aa12.59□□□□□ -0.39
TM6SF1-201ENST00000258909 RPL19P84098 196 aaKnown RBP12.59□□□□□ -0.39
TM6SF1-201ENST00000258909 ZFP82Q8N141 532 aa12.59□□□□□ -0.39
TM6SF1-201ENST00000258909 TCEAL7Q9BRU2 100 aa12.59□□□□□ -0.39
TM6SF1-201ENST00000258909 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.58□□□□□ -0.4
TM6SF1-201ENST00000258909 NIT1Q86X76 327 aa12.58□□□□□ -0.4
TM6SF1-201ENST00000258909 BAALCQ8WXS3 180 aa12.58□□□□□ -0.4
TM6SF1-201ENST00000258909 SCO2A0A1W2PP80 73 aa12.57□□□□□ -0.4
TM6SF1-201ENST00000258909 FAM229AH3BQW9 127 aa12.57□□□□□ -0.4
TM6SF1-201ENST00000258909 TOR2AQ5JU69 321 aa12.57□□□□□ -0.4
TM6SF1-201ENST00000258909 MBD3L1Q8WWY6 194 aa12.57□□□□□ -0.4
TM6SF1-201ENST00000258909 URGCP-MRPS24S4R325 110 aa12.57□□□□□ -0.4
TM6SF1-201ENST00000258909 SEC11BP0C7V7 166 aa12.56□□□□□ -0.4
TM6SF1-201ENST00000258909 ZNF345Q14585 488 aa12.56□□□□□ -0.4
TM6SF1-201ENST00000258909 ZNF471Q9BX82 626 aaPredicted RBP12.56□□□□□ -0.4
TM6SF1-201ENST00000258909 KLK12Q9UKR0 248 aa12.56□□□□□ -0.4
TM6SF1-201ENST00000258909 MUC21A0A0G2JKD1 596 aa12.55□□□□□ -0.4
TM6SF1-201ENST00000258909 MUC21A0A140T8X8 626 aa12.55□□□□□ -0.4
TM6SF1-201ENST00000258909 OR10AG1Q8NH19 301 aa12.55□□□□□ -0.4
TM6SF1-201ENST00000258909 RPL36AP83881 106 aaKnown RBP12.54□□□□□ -0.4
TM6SF1-201ENST00000258909 LINC01620Q4KN68 170 aa12.54□□□□□ -0.4
TM6SF1-201ENST00000258909 RPL36ALQ969Q0 106 aaKnown RBP12.54□□□□□ -0.4
TM6SF1-201ENST00000258909 IGKV2D-24A0A075B6R9 120 aa12.53□□□□□ -0.4
TM6SF1-201ENST00000258909 UMAD1C9J7I0 102 aa12.53□□□□□ -0.4
TM6SF1-201ENST00000258909 UBE2D3P61077 147 aa12.53□□□□□ -0.4
TM6SF1-201ENST00000258909 SSTP61278 116 aa12.53□□□□□ -0.4
TM6SF1-201ENST00000258909 UBE2D2P62837 147 aa12.53□□□□□ -0.4
TM6SF1-201ENST00000258909 BAGE2Q86Y30 109 aa12.53□□□□□ -0.4
TM6SF1-201ENST00000258909 UBE2WQ96B02 151 aa12.53□□□□□ -0.4
TM6SF1-201ENST00000258909 TRBV7-3A0A075B6L6 115 aa12.53□□□□□ -0.4
TM6SF1-201ENST00000258909 A0A087WX48 190 aa12.53□□□□□ -0.4
TM6SF1-201ENST00000258909 TRBV10-1A0A0K0K1A3 114 aa12.53□□□□□ -0.4
TM6SF1-201ENST00000258909 KANTRA0A1W2PQU2 76 aa12.53□□□□□ -0.4
TM6SF1-201ENST00000258909 BCL2L11O43521 198 aa12.53□□□□□ -0.4
TM6SF1-201ENST00000258909 PFDN1O60925 122 aa12.53□□□□□ -0.4
TM6SF1-201ENST00000258909 S100A9P06702 114 aaKnown RBP12.53□□□□□ -0.4
TM6SF1-201ENST00000258909 ZNF56Q15929 161 aa12.53□□□□□ -0.4
TM6SF1-201ENST00000258909 PRR27Q6MZM9 219 aa12.53□□□□□ -0.4
TM6SF1-201ENST00000258909 MLST8Q9BVC4 326 aa12.53□□□□□ -0.4
TM6SF1-201ENST00000258909 HMSDA8MTL9 139 aa12.52□□□□□ -0.41
TM6SF1-201ENST00000258909 H2AFB1P0C5Y9 115 aa12.52□□□□□ -0.41
TM6SF1-201ENST00000258909 COX11Q9Y6N1 276 aa12.52□□□□□ -0.41
TM6SF1-201ENST00000258909 A0A0D9SG52 128 aa12.51□□□□□ -0.41
TM6SF1-201ENST00000258909 RMI2Q96E14 147 aa12.51□□□□□ -0.41
TM6SF1-201ENST00000258909 TMEM262E9PQX1 116 aa12.5□□□□□ -0.41
TM6SF1-201ENST00000258909 C1QBP02746 253 aa12.5□□□□□ -0.41
TM6SF1-201ENST00000258909 RAB4BP61018 213 aa12.5□□□□□ -0.41
TM6SF1-201ENST00000258909 TMUB2Q71RG4 321 aa12.5□□□□□ -0.41
TM6SF1-201ENST00000258909 NEXN-AS1Q8NBZ9 246 aa12.5□□□□□ -0.41
TM6SF1-201ENST00000258909 CCL20P78556 96 aa12.49□□□□□ -0.41
TM6SF1-201ENST00000258909 SPANXN1Q5VSR9 72 aa12.49□□□□□ -0.41
TM6SF1-201ENST00000258909 KCNIP4Q6PIL6 250 aa12.49□□□□□ -0.41
TM6SF1-201ENST00000258909 OR10G8Q8NGN5 311 aa12.49□□□□□ -0.41
TM6SF1-201ENST00000258909 RBFOX3A6NFN3 312 aa12.48□□□□□ -0.41
TM6SF1-201ENST00000258909 SNAI2O43623 268 aa12.48□□□□□ -0.41
TM6SF1-201ENST00000258909 RPL35P42766 123 aaKnown RBP12.48□□□□□ -0.41
TM6SF1-201ENST00000258909 Q6ZSA8 131 aa12.48□□□□□ -0.41
TM6SF1-201ENST00000258909 DERL1Q9BUN8 251 aa12.48□□□□□ -0.41
TM6SF1-201ENST00000258909 SSBP4Q9BWG4 385 aaPredicted RBP12.48□□□□□ -0.41
TM6SF1-201ENST00000258909 TRBV6-8A0A0A6YYG3 113 aa12.47□□□□□ -0.41
TM6SF1-201ENST00000258909 F5H697 171 aa12.47□□□□□ -0.41
TM6SF1-201ENST00000258909 CXCL1P09341 107 aa12.47□□□□□ -0.41
TM6SF1-201ENST00000258909 ELOBQ15370 118 aa12.47□□□□□ -0.41
TM6SF1-201ENST00000258909 Q8N976 141 aa12.47□□□□□ -0.41
TM6SF1-201ENST00000258909 CHCHD7Q9BUK0 85 aa12.47□□□□□ -0.41
TM6SF1-201ENST00000258909 GNG13Q9P2W3 67 aa12.47□□□□□ -0.41
TM6SF1-201ENST00000258909 OR5AL1P0C617 328 aa12.46□□□□□ -0.42
TM6SF1-201ENST00000258909 EIF5AP63241 154 aaKnown RBP12.46□□□□□ -0.42
TM6SF1-201ENST00000258909 MPV17L2Q567V2 206 aa12.46□□□□□ -0.42
TM6SF1-201ENST00000258909 C15orf54Q8N8G6 183 aa12.46□□□□□ -0.42
TM6SF1-201ENST00000258909 GZMBP10144 247 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms