RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 PTPRQQ9UMZ3 2332 aa14.56□□□□□ -0.08
PTPRE-201ENST00000254667 ZNF106Q9H2Y7 1883 aaKnown RBP14.56□□□□□ -0.08
PTPRE-201ENST00000254667 ADAMTS9Q9P2N4 1935 aa14.56□□□□□ -0.08
PTPRE-201ENST00000254667 C5orf38Q86SI9 138 aa14.56□□□□□ -0.08
PTPRE-201ENST00000254667 GTSF1Q8WW33 167 aa14.56□□□□□ -0.08
PTPRE-201ENST00000254667 TRBV7-3A0A075B6L6 115 aa14.56□□□□□ -0.08
PTPRE-201ENST00000254667 PLA2G5P39877 138 aa14.56□□□□□ -0.08
PTPRE-201ENST00000254667 UBE2BP63146 152 aa14.56□□□□□ -0.08
PTPRE-201ENST00000254667 LURAP1LQ8IV03 231 aa14.56□□□□□ -0.08
PTPRE-201ENST00000254667 ACACBO00763 2458 aa14.55□□□□□ -0.08
PTPRE-201ENST00000254667 COX7A2LO14548 114 aa14.55□□□□□ -0.08
PTPRE-201ENST00000254667 ETDBQ3ZM63 59 aa14.55□□□□□ -0.08
PTPRE-201ENST00000254667 Q6ZVH6 145 aa14.55□□□□□ -0.08
PTPRE-201ENST00000254667 Q9HAA7 133 aa14.55□□□□□ -0.08
PTPRE-201ENST00000254667 CITED2Q99967 270 aaPredicted RBP14.55□□□□□ -0.08
PTPRE-201ENST00000254667 TRAV12-1A0A0B4J245 112 aa14.54□□□□□ -0.08
PTPRE-201ENST00000254667 A0A0J9YX75 114 aa14.54□□□□□ -0.08
PTPRE-201ENST00000254667 IGHG4P01861 327 aa14.54□□□□□ -0.08
PTPRE-201ENST00000254667 DNAJC9-AS1A6NH13 148 aa14.54□□□□□ -0.08
PTPRE-201ENST00000254667 K7EP13 123 aa14.54□□□□□ -0.08
PTPRE-201ENST00000254667 CAMK2N2Q96S95 79 aa14.54□□□□□ -0.08
PTPRE-201ENST00000254667 HHLA3Q9XRX5 114 aa14.53□□□□□ -0.08
PTPRE-201ENST00000254667 UNQ9165/PRO28630Q6UXU0 137 aa14.53□□□□□ -0.08
PTPRE-201ENST00000254667 K7ERJ3 54 aa14.52□□□□□ -0.08
PTPRE-201ENST00000254667 TMEM61Q8N0U2 210 aa14.52□□□□□ -0.08
PTPRE-201ENST00000254667 TIMM17AQ99595 171 aa14.52□□□□□ -0.08
PTPRE-201ENST00000254667 ANKHD1Q8IWZ3 2542 aaKnown RBP14.52□□□□□ -0.08
PTPRE-201ENST00000254667 A0A0J9YXV3 536 aa14.52□□□□□ -0.09
PTPRE-201ENST00000254667 MAJINQ3KP22 176 aa14.52□□□□□ -0.09
PTPRE-201ENST00000254667 PCP2Q8IVA1 136 aa14.52□□□□□ -0.09
PTPRE-201ENST00000254667 IGF1P05019 195 aa14.52□□□□□ -0.09
PTPRE-201ENST00000254667 TRAV4A0A0B4J268 109 aa14.51□□□□□ -0.09
PTPRE-201ENST00000254667 HAMPP81172 84 aa14.51□□□□□ -0.09
PTPRE-201ENST00000254667 AMTNQ6UX39 209 aa14.51□□□□□ -0.09
PTPRE-201ENST00000254667 IGKV1D-37A0A075B6S9 117 aa14.51□□□□□ -0.09
PTPRE-201ENST00000254667 SMAD5-AS1Q9Y6J3 95 aa14.51□□□□□ -0.09
PTPRE-201ENST00000254667 KIR2DL5BA0A0G2JN68 375 aa14.51□□□□□ -0.09
PTPRE-201ENST00000254667 KIR2DL5BA0A0G2JPC4 375 aa14.51□□□□□ -0.09
PTPRE-201ENST00000254667 C19orf84I3L1E1 186 aa14.51□□□□□ -0.09
PTPRE-201ENST00000254667 KIR2DL5AQ8N109 375 aa14.51□□□□□ -0.09
PTPRE-201ENST00000254667 TMEM263Q8WUH6 116 aaKnown RBP14.51□□□□□ -0.09
PTPRE-201ENST00000254667 TOMM6Q96B49 74 aa14.5□□□□□ -0.09
PTPRE-201ENST00000254667 DENND4AQ7Z401 1863 aa14.5□□□□□ -0.09
PTPRE-201ENST00000254667 CCDC140Q96MF4 163 aa14.5□□□□□ -0.09
PTPRE-201ENST00000254667 COX7B2Q8TF08 81 aa14.5□□□□□ -0.09
PTPRE-201ENST00000254667 TRBV12-3P01733 135 aa14.49□□□□□ -0.09
PTPRE-201ENST00000254667 ORMDL1Q9P0S3 153 aa14.49□□□□□ -0.09
PTPRE-201ENST00000254667 C19orf71A6NCJ1 209 aa14.49□□□□□ -0.09
PTPRE-201ENST00000254667 H3BMG7 143 aa14.49□□□□□ -0.09
PTPRE-201ENST00000254667 Q6YL49 198 aa14.49□□□□□ -0.09
PTPRE-201ENST00000254667 PROP1O75360 226 aa14.49□□□□□ -0.09
PTPRE-201ENST00000254667 ODF3Q96PU9 254 aa14.48□□□□□ -0.09
PTPRE-201ENST00000254667 NDUFA11Q86Y39 141 aa14.48□□□□□ -0.09
PTPRE-201ENST00000254667 TRBV10-1A0A0K0K1A3 114 aa14.48□□□□□ -0.09
PTPRE-201ENST00000254667 H0YGX0 51 aa14.48□□□□□ -0.09
PTPRE-201ENST00000254667 LGALS9O00182 355 aa14.48□□□□□ -0.09
PTPRE-201ENST00000254667 IGHV3-30P01768 117 aa14.48□□□□□ -0.09
PTPRE-201ENST00000254667 IGHV3-33P01772 117 aa14.48□□□□□ -0.09
PTPRE-201ENST00000254667 IGHV3-30-3P0DP02 117 aa14.48□□□□□ -0.09
PTPRE-201ENST00000254667 IGHV3-30-5P0DP03 117 aa14.48□□□□□ -0.09
PTPRE-201ENST00000254667 IGHV4-31P0DP07 118 aa14.47□□□□□ -0.09
PTPRE-201ENST00000254667 DEFB135Q30KP9 77 aa14.47□□□□□ -0.09
PTPRE-201ENST00000254667 MAP6D1Q9H9H5 199 aa14.47□□□□□ -0.09
PTPRE-201ENST00000254667 CXCL5P42830 114 aa14.47□□□□□ -0.09
PTPRE-201ENST00000254667 RPL18AQ02543 176 aaKnown RBP14.47□□□□□ -0.09
PTPRE-201ENST00000254667 ETDCA0A1B0GVM5 59 aa14.46□□□□□ -0.09
PTPRE-201ENST00000254667 SND1-IT1Q9HBX3 110 aa14.46□□□□□ -0.09
PTPRE-201ENST00000254667 HIST2H2BCQ6DN03 193 aa14.46□□□□□ -0.09
PTPRE-201ENST00000254667 IGLV10-54A0A075B6I4 117 aa14.46□□□□□ -0.1
PTPRE-201ENST00000254667 TM2D2Q9BX73 214 aa14.46□□□□□ -0.1
PTPRE-201ENST00000254667 F8W735 103 aaPredicted RBP14.45□□□□□ -0.1
PTPRE-201ENST00000254667 EBI3Q14213 229 aa14.45□□□□□ -0.1
PTPRE-201ENST00000254667 BRWD1-AS2P59051 145 aa14.45□□□□□ -0.1
PTPRE-201ENST00000254667 DEFB125Q8N687 156 aa14.45□□□□□ -0.1
PTPRE-201ENST00000254667 NDUFA1O15239 70 aa14.45□□□□□ -0.1
PTPRE-201ENST00000254667 PRO0255Q9UI72 69 aa14.45□□□□□ -0.1
PTPRE-201ENST00000254667 KIAA1549LQ6ZVL6 1849 aa14.45□□□□□ -0.1
PTPRE-201ENST00000254667 BAALCQ8WXS3 180 aa14.45□□□□□ -0.1
PTPRE-201ENST00000254667 COL4A4P53420 1690 aaPredicted RBP14.44□□□□□ -0.1
PTPRE-201ENST00000254667 FREM1Q5H8C1 2179 aa14.44□□□□□ -0.1
PTPRE-201ENST00000254667 BAALC-AS2P0C853 105 aa14.44□□□□□ -0.1
PTPRE-201ENST00000254667 RPL39P62891 51 aaKnown RBP14.44□□□□□ -0.1
PTPRE-201ENST00000254667 ANKRD39Q53RE8 183 aa14.44□□□□□ -0.1
PTPRE-201ENST00000254667 LINC00173Q6ZV60 143 aa14.44□□□□□ -0.1
PTPRE-201ENST00000254667 H3BQ85 93 aa14.43□□□□□ -0.1
PTPRE-201ENST00000254667 NUPR1O60356 82 aa14.43□□□□□ -0.1
PTPRE-201ENST00000254667 C22orf34Q6ZV56 151 aa14.43□□□□□ -0.1
PTPRE-201ENST00000254667 DYSFO75923 2080 aa14.43□□□□□ -0.1
PTPRE-201ENST00000254667 CRIP3Q6Q6R5 217 aa14.43□□□□□ -0.1
PTPRE-201ENST00000254667 CITED1Q99966 193 aa14.43□□□□□ -0.1
PTPRE-201ENST00000254667 HIGD1BQ9P298 99 aa14.43□□□□□ -0.1
PTPRE-201ENST00000254667 Q6ZPA2 131 aa14.43□□□□□ -0.1
PTPRE-201ENST00000254667 NTN5Q8WTR8 489 aaPredicted RBP14.43□□□□□ -0.1
PTPRE-201ENST00000254667 PLCE1Q9P212 2302 aa14.43□□□□□ -0.1
PTPRE-201ENST00000254667 EIF4EBP1Q13541 118 aaPredicted RBP14.43□□□□□ -0.1
PTPRE-201ENST00000254667 HIVEP2P31629 2446 aa14.43□□□□□ -0.1
PTPRE-201ENST00000254667 CUL9Q8IWT3 2517 aa14.43□□□□□ -0.1
PTPRE-201ENST00000254667 TIRAPP58753 221 aa14.42□□□□□ -0.1
PTPRE-201ENST00000254667 C9orf153Q5TBE3 101 aa14.42□□□□□ -0.1
PTPRE-201ENST00000254667 VSIG2Q96IQ7 327 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms