RNA–Protein interactions for RNA: ENST00000252699.6

ACTN4-201, Transcript of actinin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTN4, Length 4,963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-201ENST00000252699 ZNF747Q9BV97 191 aa13□□□□□ -0.33
ACTN4-201ENST00000252699 RHOHQ15669 191 aa12.99□□□□□ -0.33
ACTN4-201ENST00000252699 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.99□□□□□ -0.33
ACTN4-201ENST00000252699 SAMD5Q5TGI4 173 aa12.99□□□□□ -0.33
ACTN4-201ENST00000252699 C10orf99Q6UWK7 81 aa12.99□□□□□ -0.33
ACTN4-201ENST00000252699 IGLC3P0DOY3 106 aa12.99□□□□□ -0.33
ACTN4-201ENST00000252699 PAX2Q02962 417 aa12.99□□□□□ -0.33
ACTN4-201ENST00000252699 PIFOQ8TCI5 191 aa12.99□□□□□ -0.33
ACTN4-201ENST00000252699 NUPR1O60356 82 aa12.98□□□□□ -0.33
ACTN4-201ENST00000252699 SUMO4Q6EEV6 95 aa12.98□□□□□ -0.33
ACTN4-201ENST00000252699 Q6ZSV7 163 aa12.98□□□□□ -0.33
ACTN4-201ENST00000252699 ZFAND3Q9H8U3 227 aa12.98□□□□□ -0.33
ACTN4-201ENST00000252699 IGLV2-8P01709 118 aa12.97□□□□□ -0.33
ACTN4-201ENST00000252699 VWC2LB2RUY7 222 aa12.97□□□□□ -0.33
ACTN4-201ENST00000252699 KRTAP10-9P60411 292 aa12.97□□□□□ -0.33
ACTN4-201ENST00000252699 CTRLP40313 264 aa12.97□□□□□ -0.33
ACTN4-201ENST00000252699 LINC00322Q6ZN03 302 aaPredicted RBP12.97□□□□□ -0.33
ACTN4-201ENST00000252699 DKK2Q9UBU2 259 aa12.97□□□□□ -0.33
ACTN4-201ENST00000252699 INAFM1C9JVW0 142 aa12.97□□□□□ -0.33
ACTN4-201ENST00000252699 MKI67P46013 3256 aaKnown RBP12.96□□□□□ -0.33
ACTN4-201ENST00000252699 RNASE13Q5GAN3 156 aaKnown RBP12.96□□□□□ -0.33
ACTN4-201ENST00000252699 A0A0J9YY99 117 aa12.96□□□□□ -0.33
ACTN4-201ENST00000252699 ZNF80P51504 273 aaPredicted RBP12.96□□□□□ -0.33
ACTN4-201ENST00000252699 PLA2G2AP14555 144 aa12.96□□□□□ -0.34
ACTN4-201ENST00000252699 K7EMI3 77 aa12.96□□□□□ -0.34
ACTN4-201ENST00000252699 S100A7L2Q5SY68 101 aa12.96□□□□□ -0.34
ACTN4-201ENST00000252699 AVPP01185 164 aa12.95□□□□□ -0.34
ACTN4-201ENST00000252699 KIR3DS1Q14943 382 aa12.95□□□□□ -0.34
ACTN4-201ENST00000252699 MRAPQ8TCY5 172 aa12.95□□□□□ -0.34
ACTN4-201ENST00000252699 C16orf74Q96GX8 76 aa12.95□□□□□ -0.34
ACTN4-201ENST00000252699 DOPEY1Q5JWR5 2465 aa12.95□□□□□ -0.34
ACTN4-201ENST00000252699 PRSS29PA6NIE9 313 aa12.94□□□□□ -0.34
ACTN4-201ENST00000252699 MLST8Q9BVC4 326 aa12.94□□□□□ -0.34
ACTN4-201ENST00000252699 JPT2Q9H910 190 aa12.94□□□□□ -0.34
ACTN4-201ENST00000252699 MAP6D1Q9H9H5 199 aa12.93□□□□□ -0.34
ACTN4-201ENST00000252699 LGALS9O00182 355 aa12.93□□□□□ -0.34
ACTN4-201ENST00000252699 PSCAO43653 123 aa12.93□□□□□ -0.34
ACTN4-201ENST00000252699 SLC25A20O43772 301 aa12.93□□□□□ -0.34
ACTN4-201ENST00000252699 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.93□□□□□ -0.34
ACTN4-201ENST00000252699 IGKV2-29A2NJV5 120 aaPredicted RBP12.93□□□□□ -0.34
ACTN4-201ENST00000252699 K7EQG2 157 aa12.93□□□□□ -0.34
ACTN4-201ENST00000252699 EREGO14944 169 aa12.93□□□□□ -0.34
ACTN4-201ENST00000252699 Q6ZS46 218 aa12.93□□□□□ -0.34
ACTN4-201ENST00000252699 MDFICQ9P1T7 246 aa12.93□□□□□ -0.34
ACTN4-201ENST00000252699 COX8AP10176 69 aa12.92□□□□□ -0.34
ACTN4-201ENST00000252699 MED14OSP0DP75 135 aa12.92□□□□□ -0.34
ACTN4-201ENST00000252699 ANGP03950 147 aaKnown RBP12.91□□□□□ -0.34
ACTN4-201ENST00000252699 LAMA3Q16787 3333 aa12.91□□□□□ -0.34
ACTN4-201ENST00000252699 LINC00173Q6ZV60 143 aa12.91□□□□□ -0.34
ACTN4-201ENST00000252699 MAJINQ3KP22 176 aa12.91□□□□□ -0.34
ACTN4-201ENST00000252699 NDUFA12Q9UI09 145 aa12.91□□□□□ -0.34
ACTN4-201ENST00000252699 PSMB8P28062 276 aa12.9□□□□□ -0.34
ACTN4-201ENST00000252699 INSL3P51460 131 aa12.9□□□□□ -0.34
ACTN4-201ENST00000252699 MRPL52Q86TS9 123 aaKnown RBP12.9□□□□□ -0.34
ACTN4-201ENST00000252699 PSMG3-AS1Q96PY0 264 aa12.9□□□□□ -0.34
ACTN4-201ENST00000252699 PGPEP1Q9NXJ5 209 aa12.9□□□□□ -0.34
ACTN4-201ENST00000252699 LEPROTO15243 131 aa12.9□□□□□ -0.34
ACTN4-201ENST00000252699 ZNF702PQ9H963 129 aa12.9□□□□□ -0.34
ACTN4-201ENST00000252699 DEFB114Q30KQ6 69 aa12.9□□□□□ -0.34
ACTN4-201ENST00000252699 ZMAT4Q9H898 229 aa12.9□□□□□ -0.34
ACTN4-201ENST00000252699 SMAD5-AS1Q9Y6J3 95 aa12.9□□□□□ -0.34
ACTN4-201ENST00000252699 SPART-AS1P0CW21 52 aa12.89□□□□□ -0.35
ACTN4-201ENST00000252699 DEFB135Q30KP9 77 aa12.89□□□□□ -0.35
ACTN4-201ENST00000252699 ZFP2Q6ZN57 461 aa12.89□□□□□ -0.35
ACTN4-201ENST00000252699 CRLF1O75462 422 aa12.88□□□□□ -0.35
ACTN4-201ENST00000252699 LY6G6DO95868 133 aa12.88□□□□□ -0.35
ACTN4-201ENST00000252699 PFN2P35080 140 aa12.88□□□□□ -0.35
ACTN4-201ENST00000252699 CDPF1Q6NVV7 123 aa12.88□□□□□ -0.35
ACTN4-201ENST00000252699 CLPSL2Q6UWE3 100 aa12.88□□□□□ -0.35
ACTN4-201ENST00000252699 DNAJC30Q96LL9 226 aa12.88□□□□□ -0.35
ACTN4-201ENST00000252699 C20orf173Q96LM9 149 aa12.88□□□□□ -0.35
ACTN4-201ENST00000252699 BBC3Q96PG8 261 aaPredicted RBP12.88□□□□□ -0.35
ACTN4-201ENST00000252699 J3QQQ9 107 aa12.88□□□□□ -0.35
ACTN4-201ENST00000252699 SNHG12Q9BXW3 62 aa12.88□□□□□ -0.35
ACTN4-201ENST00000252699 HERVK_113P63121 156 aa12.88□□□□□ -0.35
ACTN4-201ENST00000252699 NDUFA11Q86Y39 141 aa12.88□□□□□ -0.35
ACTN4-201ENST00000252699 ACANP16112 2415 aa12.88□□□□□ -0.35
ACTN4-201ENST00000252699 GYPEP15421 78 aa12.88□□□□□ -0.35
ACTN4-201ENST00000252699 CST9LQ9H4G1 147 aa12.88□□□□□ -0.35
ACTN4-201ENST00000252699 ZNF561-AS1K7EIQ3 104 aa12.87□□□□□ -0.35
ACTN4-201ENST00000252699 ATP5G1P05496 136 aa12.87□□□□□ -0.35
ACTN4-201ENST00000252699 GATD1Q8NB37 220 aa12.87□□□□□ -0.35
ACTN4-201ENST00000252699 A0A1B0GXF2 115 aa12.87□□□□□ -0.35
ACTN4-201ENST00000252699 K7EQD1 137 aa12.87□□□□□ -0.35
ACTN4-201ENST00000252699 HIST2H2BDQ6DRA6 164 aa12.87□□□□□ -0.35
ACTN4-201ENST00000252699 DEFB125Q8N687 156 aa12.87□□□□□ -0.35
ACTN4-201ENST00000252699 ADAMTS20P59510 1910 aa12.86□□□□□ -0.35
ACTN4-201ENST00000252699 H3BMM0 161 aa12.86□□□□□ -0.35
ACTN4-201ENST00000252699 ESM1Q9NQ30 184 aa12.86□□□□□ -0.35
ACTN4-201ENST00000252699 GHRHP01286 108 aa12.86□□□□□ -0.35
ACTN4-201ENST00000252699 SPINK8P0C7L1 97 aa12.86□□□□□ -0.35
ACTN4-201ENST00000252699 SPANXA1Q9NS26 97 aa12.86□□□□□ -0.35
ACTN4-201ENST00000252699 SCGB1A1P11684 91 aa12.86□□□□□ -0.35
ACTN4-201ENST00000252699 MBD6Q96DN6 1003 aa12.85□□□□□ -0.35
ACTN4-201ENST00000252699 ATP6V0E2Q8NHE4 81 aa12.85□□□□□ -0.35
ACTN4-201ENST00000252699 DEFB4AO15263 64 aa12.85□□□□□ -0.35
ACTN4-201ENST00000252699 LINC01006Q8NI28 216 aa12.85□□□□□ -0.35
ACTN4-201ENST00000252699 ATXN8Q156A1 80 aa12.84□□□□□ -0.35
ACTN4-201ENST00000252699 TRAV8-2A0A0B4J237 113 aa12.84□□□□□ -0.35
ACTN4-201ENST00000252699 DLEU1O43261 78 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms