RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 A0A1W2PRE2 83 aa14.14□□□□□ -0.15
NEDD8-201ENST00000250495 GGTLC3B5MD39 225 aa14.14□□□□□ -0.15
NEDD8-201ENST00000250495 MGST1P10620 155 aaKnown RBP14.14□□□□□ -0.15
NEDD8-201ENST00000250495 LELP1Q5T871 98 aa14.14□□□□□ -0.15
NEDD8-201ENST00000250495 FRZBQ92765 325 aa14.14□□□□□ -0.15
NEDD8-201ENST00000250495 INAFM2P0DMQ5 153 aa14.13□□□□□ -0.15
NEDD8-201ENST00000250495 RNASE3P12724 160 aaKnown RBP14.13□□□□□ -0.15
NEDD8-201ENST00000250495 ATP6V0E2Q8NHE4 81 aa14.13□□□□□ -0.15
NEDD8-201ENST00000250495 NTN5Q8WTR8 489 aaPredicted RBP14.13□□□□□ -0.15
NEDD8-201ENST00000250495 GTSF1LQ9H1H1 148 aa14.13□□□□□ -0.15
NEDD8-201ENST00000250495 LRCOL1A6NCL2 159 aa14.12□□□□□ -0.15
NEDD8-201ENST00000250495 RHEBQ15382 184 aa14.12□□□□□ -0.15
NEDD8-201ENST00000250495 IGLV5-52A0A0A0MRZ9 124 aa14.11□□□□□ -0.15
NEDD8-201ENST00000250495 FABP5P3A8MUU1 101 aa14.11□□□□□ -0.15
NEDD8-201ENST00000250495 S100A4P26447 101 aaKnown RBP14.11□□□□□ -0.15
NEDD8-201ENST00000250495 FGF8P55075 233 aaPredicted RBP14.11□□□□□ -0.15
NEDD8-201ENST00000250495 PIK3CD-AS1Q5SR53 167 aa14.11□□□□□ -0.15
NEDD8-201ENST00000250495 Q9HAA7 133 aa14.11□□□□□ -0.15
NEDD8-201ENST00000250495 FAM74A7A6NL05 159 aa14.1□□□□□ -0.15
NEDD8-201ENST00000250495 A8MWV9 139 aa14.1□□□□□ -0.15
NEDD8-201ENST00000250495 IGHV3-30P01768 117 aa14.1□□□□□ -0.15
NEDD8-201ENST00000250495 IGHV3-33P01772 117 aa14.1□□□□□ -0.15
NEDD8-201ENST00000250495 IGHV3-30-3P0DP02 117 aa14.1□□□□□ -0.15
NEDD8-201ENST00000250495 IGHV3-30-5P0DP03 117 aa14.1□□□□□ -0.15
NEDD8-201ENST00000250495 FAM74A3Q4VXF1 159 aa14.1□□□□□ -0.15
NEDD8-201ENST00000250495 Q5VSD8 79 aa14.1□□□□□ -0.15
NEDD8-201ENST00000250495 ZFP2Q6ZN57 461 aa14.1□□□□□ -0.15
NEDD8-201ENST00000250495 LINC00479Q96M42 142 aa14.1□□□□□ -0.15
NEDD8-201ENST00000250495 IGKV3D-20A0A0C4DH25 116 aa14.09□□□□□ -0.15
NEDD8-201ENST00000250495 TMEM250H0YL14 139 aa14.09□□□□□ -0.15
NEDD8-201ENST00000250495 MEF2BQ02080 365 aaPredicted RBP14.09□□□□□ -0.15
NEDD8-201ENST00000250495 TRAV34A0A0B4J273 112 aa14.08□□□□□ -0.16
NEDD8-201ENST00000250495 LAGE3Q14657 143 aa14.08□□□□□ -0.16
NEDD8-201ENST00000250495 Q8N814 137 aa14.08□□□□□ -0.16
NEDD8-201ENST00000250495 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.08□□□□□ -0.16
NEDD8-201ENST00000250495 TM2D2Q9BX73 214 aa14.08□□□□□ -0.16
NEDD8-201ENST00000250495 PARLQ9H300 379 aa14.08□□□□□ -0.16
NEDD8-201ENST00000250495 SMCO4Q9NRQ5 59 aa14.08□□□□□ -0.16
NEDD8-201ENST00000250495 ARL2-SNX15V9GYD0 113 aa14.08□□□□□ -0.16
NEDD8-201ENST00000250495 ASIPP42127 132 aa14.07□□□□□ -0.16
NEDD8-201ENST00000250495 PNRC1Q12796 327 aaPredicted RBP14.07□□□□□ -0.16
NEDD8-201ENST00000250495 TMEM70Q9BUB7 260 aa14.07□□□□□ -0.16
NEDD8-201ENST00000250495 TMA7Q9Y2S6 64 aaKnown RBP14.07□□□□□ -0.16
NEDD8-201ENST00000250495 SMR3BP02814 79 aaPredicted RBP14.06□□□□□ -0.16
NEDD8-201ENST00000250495 Q6ZSN1 163 aa14.06□□□□□ -0.16
NEDD8-201ENST00000250495 HIST1H2BAQ96A08 127 aa14.06□□□□□ -0.16
NEDD8-201ENST00000250495 IL36BQ9NZH7 164 aa14.06□□□□□ -0.16
NEDD8-201ENST00000250495 C7orf77A4D0Y5 90 aa14.05□□□□□ -0.16
NEDD8-201ENST00000250495 GAGE12JA6NER3 117 aa14.05□□□□□ -0.16
NEDD8-201ENST00000250495 FAM229AH3BQW9 127 aa14.05□□□□□ -0.16
NEDD8-201ENST00000250495 M0R036 132 aa14.05□□□□□ -0.16
NEDD8-201ENST00000250495 PEX7O00628 323 aa14.05□□□□□ -0.16
NEDD8-201ENST00000250495 UBE2G2P60604 165 aa14.05□□□□□ -0.16
NEDD8-201ENST00000250495 GAGE1Q13065 139 aa14.05□□□□□ -0.16
NEDD8-201ENST00000250495 GAGE4Q13068 117 aa14.05□□□□□ -0.16
NEDD8-201ENST00000250495 GAGE5Q13069 117 aa14.05□□□□□ -0.16
NEDD8-201ENST00000250495 GAGE13Q4V321 117 aa14.05□□□□□ -0.16
NEDD8-201ENST00000250495 FAT1Q14517 4588 aa14.04□□□□□ -0.16
NEDD8-201ENST00000250495 A0A087WWC5 75 aa14.04□□□□□ -0.16
NEDD8-201ENST00000250495 B4DEV8 164 aa14.04□□□□□ -0.16
NEDD8-201ENST00000250495 PDE6DO43924 150 aa14.04□□□□□ -0.16
NEDD8-201ENST00000250495 CBLN2Q8IUK8 224 aa14.04□□□□□ -0.16
NEDD8-201ENST00000250495 TRAV8-3A0A0A6YYJ7 113 aa14.03□□□□□ -0.16
NEDD8-201ENST00000250495 SYT8Q8NBV8 401 aa14.03□□□□□ -0.16
NEDD8-201ENST00000250495 RPS10P5Q9NQ39 176 aa14.03□□□□□ -0.16
NEDD8-201ENST00000250495 ZFP30Q9Y2G7 519 aa14.03□□□□□ -0.16
NEDD8-201ENST00000250495 LINC00694P0DN24 101 aa14.02□□□□□ -0.17
NEDD8-201ENST00000250495 DNLZQ5SXM8 178 aa14.02□□□□□ -0.17
NEDD8-201ENST00000250495 DMRTA1Q5VZB9 504 aa14.02□□□□□ -0.17
NEDD8-201ENST00000250495 UFSP1Q6NVU6 142 aa14.02□□□□□ -0.17
NEDD8-201ENST00000250495 Q86TA4 180 aa14.02□□□□□ -0.17
NEDD8-201ENST00000250495 C15orf54Q8N8G6 183 aa14.02□□□□□ -0.17
NEDD8-201ENST00000250495 JPT2Q9H910 190 aa14.02□□□□□ -0.17
NEDD8-201ENST00000250495 H3BVH4 76 aa14.01□□□□□ -0.17
NEDD8-201ENST00000250495 RHODO00212 210 aa14.01□□□□□ -0.17
NEDD8-201ENST00000250495 PAGE4O60829 102 aa14.01□□□□□ -0.17
NEDD8-201ENST00000250495 ARMS2P0C7Q2 107 aa14.01□□□□□ -0.17
NEDD8-201ENST00000250495 CRIP1P50238 77 aa14.01□□□□□ -0.17
NEDD8-201ENST00000250495 SAMD10Q9BYL1 202 aa14.01□□□□□ -0.17
NEDD8-201ENST00000250495 CEBPGP53567 150 aa14□□□□□ -0.17
NEDD8-201ENST00000250495 COX8CQ7Z4L0 72 aa14□□□□□ -0.17
NEDD8-201ENST00000250495 ZC2HC1AQ96GY0 325 aa14□□□□□ -0.17
NEDD8-201ENST00000250495 NAT8Q9UHE5 227 aa14□□□□□ -0.17
NEDD8-201ENST00000250495 VPS13BQ7Z7G8 4022 aa13.99□□□□□ -0.17
NEDD8-201ENST00000250495 ZNF727A8MUV8 499 aa13.99□□□□□ -0.17
NEDD8-201ENST00000250495 UBE2G1P62253 170 aa13.99□□□□□ -0.17
NEDD8-201ENST00000250495 HAMPP81172 84 aa13.99□□□□□ -0.17
NEDD8-201ENST00000250495 FAM162BQ5T6X4 162 aa13.99□□□□□ -0.17
NEDD8-201ENST00000250495 C14orf178Q8N769 122 aaPredicted RBP13.99□□□□□ -0.17
NEDD8-201ENST00000250495 FMC1Q96HJ9 113 aa13.99□□□□□ -0.17
NEDD8-201ENST00000250495 PHLDA3Q9Y5J5 127 aa13.99□□□□□ -0.17
NEDD8-201ENST00000250495 SH2D1AO60880 128 aa13.98□□□□□ -0.17
NEDD8-201ENST00000250495 DAZ4Q86SG3 579 aaKnown RBP13.98□□□□□ -0.17
NEDD8-201ENST00000250495 Q8N3U1 123 aa13.98□□□□□ -0.17
NEDD8-201ENST00000250495 SMIM7Q9BQ49 75 aa13.98□□□□□ -0.17
NEDD8-201ENST00000250495 DAZ3Q9NR90 486 aaKnown RBP13.98□□□□□ -0.17
NEDD8-201ENST00000250495 Q9UF83 564 aa13.98□□□□□ -0.17
NEDD8-201ENST00000250495 COX11Q9Y6N1 276 aa13.98□□□□□ -0.17
NEDD8-201ENST00000250495 GRIFINA4D1Z8 144 aa13.97□□□□□ -0.17
NEDD8-201ENST00000250495 TCEAL7Q9BRU2 100 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms