RNA–Protein interactions for RNA: ENST00000248054.9

SIN3B-201, Transcript of SIN3 transcription regulator family member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIN3B, Length 5,037 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-201ENST00000248054 SOCS3O14543 225 aa12.15□□□□□ -0.46
SIN3B-201ENST00000248054 IFITM1P13164 125 aa12.15□□□□□ -0.46
SIN3B-201ENST00000248054 KLK9Q9UKQ9 250 aa12.15□□□□□ -0.46
SIN3B-201ENST00000248054 ABCA1O95477 2261 aa12.15□□□□□ -0.46
SIN3B-201ENST00000248054 CUL9Q8IWT3 2517 aa12.15□□□□□ -0.46
SIN3B-201ENST00000248054 TRAV26-2A0A0B4J265 109 aa12.15□□□□□ -0.47
SIN3B-201ENST00000248054 IGHV3-53P01767 116 aa12.15□□□□□ -0.47
SIN3B-201ENST00000248054 FGF6P10767 208 aa12.15□□□□□ -0.47
SIN3B-201ENST00000248054 ZNF503Q96F45 646 aa12.15□□□□□ -0.47
SIN3B-201ENST00000248054 PRSS29PA6NIE9 313 aa12.14□□□□□ -0.47
SIN3B-201ENST00000248054 ACACBO00763 2458 aa12.14□□□□□ -0.47
SIN3B-201ENST00000248054 HERV-K104P63124 156 aa12.14□□□□□ -0.47
SIN3B-201ENST00000248054 TMEM243Q9BU79 118 aa12.14□□□□□ -0.47
SIN3B-201ENST00000248054 HIST1H4AP62805 103 aaKnown RBP12.14□□□□□ -0.47
SIN3B-201ENST00000248054 TRAV13-2A0A0B4J235 113 aa12.14□□□□□ -0.47
SIN3B-201ENST00000248054 VWC2LB2RUY7 222 aa12.14□□□□□ -0.47
SIN3B-201ENST00000248054 GAGE2AQ6NT46 116 aa12.14□□□□□ -0.47
SIN3B-201ENST00000248054 HIGD1BQ9P298 99 aa12.14□□□□□ -0.47
SIN3B-201ENST00000248054 TRAV25A0A0B4J276 109 aa12.13□□□□□ -0.47
SIN3B-201ENST00000248054 KNCNA6PVL3 124 aa12.13□□□□□ -0.47
SIN3B-201ENST00000248054 PRR14LQ5THK1 2151 aa12.13□□□□□ -0.47
SIN3B-201ENST00000248054 MED14OSP0DP75 135 aa12.13□□□□□ -0.47
SIN3B-201ENST00000248054 SPANXB1Q9NS25 103 aaPredicted RBP12.13□□□□□ -0.47
SIN3B-201ENST00000248054 IGLV2-8P01709 118 aa12.13□□□□□ -0.47
SIN3B-201ENST00000248054 C3orf56Q8N813 242 aa12.13□□□□□ -0.47
SIN3B-201ENST00000248054 FOXI1Q12951 378 aa12.12□□□□□ -0.47
SIN3B-201ENST00000248054 GTSF1Q8WW33 167 aa12.12□□□□□ -0.47
SIN3B-201ENST00000248054 APOC4P55056 127 aa12.12□□□□□ -0.47
SIN3B-201ENST00000248054 KIAA1549Q9HCM3 1950 aa12.12□□□□□ -0.47
SIN3B-201ENST00000248054 TRAV12-2A0A075B6T6 113 aa12.12□□□□□ -0.47
SIN3B-201ENST00000248054 IGHG4P01861 327 aa12.12□□□□□ -0.47
SIN3B-201ENST00000248054 C2orf91Q6ZV80 131 aa12.12□□□□□ -0.47
SIN3B-201ENST00000248054 PIEZO1Q92508 2521 aa12.11□□□□□ -0.47
SIN3B-201ENST00000248054 ZNF843Q8N446 348 aa12.11□□□□□ -0.47
SIN3B-201ENST00000248054 Q8N6K4 173 aa12.11□□□□□ -0.47
SIN3B-201ENST00000248054 C4orf3Q8WVX3 66 aa12.11□□□□□ -0.47
SIN3B-201ENST00000248054 UFSP1Q6NVU6 142 aa12.11□□□□□ -0.47
SIN3B-201ENST00000248054 TRAV12-1A0A0B4J245 112 aa12.1□□□□□ -0.47
SIN3B-201ENST00000248054 LAMA2P24043 3122 aaKnown RBP12.1□□□□□ -0.47
SIN3B-201ENST00000248054 CCDC140Q96MF4 163 aa12.1□□□□□ -0.47
SIN3B-201ENST00000248054 TNRC6BQ9UPQ9 1833 aaKnown RBP12.1□□□□□ -0.47
SIN3B-201ENST00000248054 C19orf71A6NCJ1 209 aa12.1□□□□□ -0.47
SIN3B-201ENST00000248054 CREBBPQ92793 2442 aa12.1□□□□□ -0.47
SIN3B-201ENST00000248054 MT-ATP8P03928 68 aa12.1□□□□□ -0.47
SIN3B-201ENST00000248054 F6UB75 175 aa12.09□□□□□ -0.47
SIN3B-201ENST00000248054 DEFB104AQ8WTQ1 72 aa12.09□□□□□ -0.47
SIN3B-201ENST00000248054 IGHV4OR15-8A0A075B7B6 117 aa12.09□□□□□ -0.47
SIN3B-201ENST00000248054 A0A087WW49 117 aa12.09□□□□□ -0.47
SIN3B-201ENST00000248054 CFC1BP0CG36 223 aa12.09□□□□□ -0.47
SIN3B-201ENST00000248054 CFC1P0CG37 223 aa12.09□□□□□ -0.47
SIN3B-201ENST00000248054 SLURP1P55000 103 aa12.09□□□□□ -0.47
SIN3B-201ENST00000248054 A0A1B0GXF2 115 aa12.08□□□□□ -0.48
SIN3B-201ENST00000248054 IGHV4-31P0DP07 118 aa12.08□□□□□ -0.48
SIN3B-201ENST00000248054 Q6YL49 198 aa12.08□□□□□ -0.48
SIN3B-201ENST00000248054 DSCAMO60469 2012 aa12.08□□□□□ -0.48
SIN3B-201ENST00000248054 ZNRF2Q8NHG8 242 aa12.08□□□□□ -0.48
SIN3B-201ENST00000248054 F8WEM9 126 aa12.08□□□□□ -0.48
SIN3B-201ENST00000248054 ACYP1P07311 99 aa12.07□□□□□ -0.48
SIN3B-201ENST00000248054 EDA2RQ9HAV5 297 aa12.07□□□□□ -0.48
SIN3B-201ENST00000248054 C9orf153Q5TBE3 101 aa12.06□□□□□ -0.48
SIN3B-201ENST00000248054 MYCNOSP40205 109 aa12.06□□□□□ -0.48
SIN3B-201ENST00000248054 Q6ZUT4 128 aa12.06□□□□□ -0.48
SIN3B-201ENST00000248054 RPL32P62910 135 aaKnown RBP12.06□□□□□ -0.48
SIN3B-201ENST00000248054 GNRH2O43555 120 aa12.06□□□□□ -0.48
SIN3B-201ENST00000248054 DEFB136Q30KP8 78 aa12.06□□□□□ -0.48
SIN3B-201ENST00000248054 UBL5Q9BZL1 73 aa12.06□□□□□ -0.48
SIN3B-201ENST00000248054 CARD19Q96LW7 228 aa12.05□□□□□ -0.48
SIN3B-201ENST00000248054 LGALS9O00182 355 aa12.05□□□□□ -0.48
SIN3B-201ENST00000248054 C9orf66Q5T8R8 295 aa12.05□□□□□ -0.48
SIN3B-201ENST00000248054 PRAC2D3DTV9 90 aa12.05□□□□□ -0.48
SIN3B-201ENST00000248054 SPATA25Q9BR10 227 aa12.05□□□□□ -0.48
SIN3B-201ENST00000248054 DEFB130BP0DP73 79 aa12.04□□□□□ -0.48
SIN3B-201ENST00000248054 DEFB130AP0DP74 79 aa12.04□□□□□ -0.48
SIN3B-201ENST00000248054 MBD6Q96DN6 1003 aa12.04□□□□□ -0.48
SIN3B-201ENST00000248054 PTH2Q96A98 100 aa12.04□□□□□ -0.48
SIN3B-201ENST00000248054 ODF3Q96PU9 254 aa12.04□□□□□ -0.48
SIN3B-201ENST00000248054 MLST8Q9BVC4 326 aa12.04□□□□□ -0.48
SIN3B-201ENST00000248054 ZNF625Q96I27 306 aaPredicted RBP12.03□□□□□ -0.48
SIN3B-201ENST00000248054 CDSNQ15517 529 aa12.03□□□□□ -0.48
SIN3B-201ENST00000248054 UNQ9165/PRO28630Q6UXU0 137 aa12.03□□□□□ -0.48
SIN3B-201ENST00000248054 TEN1Q86WV5 123 aa12.03□□□□□ -0.48
SIN3B-201ENST00000248054 DAD1P61803 113 aa12.02□□□□□ -0.48
SIN3B-201ENST00000248054 CLPSL1A2RUU4 121 aa12.02□□□□□ -0.49
SIN3B-201ENST00000248054 C15orf53Q8NAA6 179 aa12.02□□□□□ -0.49
SIN3B-201ENST00000248054 LINC01548A6NM66 108 aa12.01□□□□□ -0.49
SIN3B-201ENST00000248054 E9PLD3 99 aa12.01□□□□□ -0.49
SIN3B-201ENST00000248054 ARFGEF3Q5TH69 2177 aa12.01□□□□□ -0.49
SIN3B-201ENST00000248054 IGHV3-16A0A0C4DH30 117 aa12.01□□□□□ -0.49
SIN3B-201ENST00000248054 TIMM17AQ99595 171 aa12.01□□□□□ -0.49
SIN3B-201ENST00000248054 ZFAND3Q9H8U3 227 aa12.01□□□□□ -0.49
SIN3B-201ENST00000248054 LINC00322Q6ZN03 302 aaPredicted RBP12.01□□□□□ -0.49
SIN3B-201ENST00000248054 DNAJC9-AS1A6NH13 148 aa12□□□□□ -0.49
SIN3B-201ENST00000248054 ZNF561-AS1K7EIQ3 104 aa12□□□□□ -0.49
SIN3B-201ENST00000248054 TRBV12-3P01733 135 aa12□□□□□ -0.49
SIN3B-201ENST00000248054 INSL3P51460 131 aa12□□□□□ -0.49
SIN3B-201ENST00000248054 ZFP2Q6ZN57 461 aa12□□□□□ -0.49
SIN3B-201ENST00000248054 CACNA1AO00555 2505 aa12□□□□□ -0.49
SIN3B-201ENST00000248054 TNCP24821 2201 aa12□□□□□ -0.49
SIN3B-201ENST00000248054 IGF2RP11717 2491 aa12□□□□□ -0.49
SIN3B-201ENST00000248054 A0A0J9YX75 114 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 134.2 ms