RNA–Protein interactions for RNA: ENST00000244741.9

CDKN1A-201, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-201ENST00000244741 IGLV2-18A0A075B6J9 118 aa12.59□□□□□ -0.39
CDKN1A-201ENST00000244741 TRAV26-2A0A0B4J265 109 aa12.59□□□□□ -0.39
CDKN1A-201ENST00000244741 SMIM15Q7Z3B0 74 aa12.59□□□□□ -0.39
CDKN1A-201ENST00000244741 DKK2Q9UBU2 259 aa12.59□□□□□ -0.39
CDKN1A-201ENST00000244741 F6UB75 175 aa12.58□□□□□ -0.4
CDKN1A-201ENST00000244741 NRACQ8N912 160 aa12.58□□□□□ -0.4
CDKN1A-201ENST00000244741 DNHD1Q96M86 4753 aa12.58□□□□□ -0.4
CDKN1A-201ENST00000244741 SPRY2O43597 315 aa12.57□□□□□ -0.4
CDKN1A-201ENST00000244741 FGF6P10767 208 aa12.57□□□□□ -0.4
CDKN1A-201ENST00000244741 TCTAP57738 103 aa12.57□□□□□ -0.4
CDKN1A-201ENST00000244741 Q8N8P6 123 aa12.57□□□□□ -0.4
CDKN1A-201ENST00000244741 KIR3DS1Q14943 382 aa12.56□□□□□ -0.4
CDKN1A-201ENST00000244741 DCANP1Q8TF63 244 aa12.56□□□□□ -0.4
CDKN1A-201ENST00000244741 FAM19A4Q96LR4 140 aa12.56□□□□□ -0.4
CDKN1A-201ENST00000244741 TRAV21A0A0B4J279 112 aa12.55□□□□□ -0.4
CDKN1A-201ENST00000244741 IGLV1-51P01701 117 aa12.55□□□□□ -0.4
CDKN1A-201ENST00000244741 CCL25O15444 150 aa12.54□□□□□ -0.4
CDKN1A-201ENST00000244741 ZNF688P0C7X2 276 aa12.54□□□□□ -0.4
CDKN1A-201ENST00000244741 RNASE4P34096 147 aaKnown RBP12.54□□□□□ -0.4
CDKN1A-201ENST00000244741 OXLD1Q5BKU9 147 aa12.54□□□□□ -0.4
CDKN1A-201ENST00000244741 NOTCH1P46531 2555 aa12.54□□□□□ -0.4
CDKN1A-201ENST00000244741 MGAM2Q2M2H8 2515 aa12.54□□□□□ -0.4
CDKN1A-201ENST00000244741 PRSS47A8MTI9 375 aa12.54□□□□□ -0.4
CDKN1A-201ENST00000244741 TAX1BP3O14907 124 aa12.54□□□□□ -0.4
CDKN1A-201ENST00000244741 WFDC9Q8NEX5 89 aa12.54□□□□□ -0.4
CDKN1A-201ENST00000244741 ANXA2RQ3ZCQ2 193 aa12.53□□□□□ -0.4
CDKN1A-201ENST00000244741 BOD1L2Q8IYS8 172 aa12.53□□□□□ -0.4
CDKN1A-201ENST00000244741 DEFB125Q8N687 156 aa12.53□□□□□ -0.4
CDKN1A-201ENST00000244741 M0R381 172 aa12.53□□□□□ -0.4
CDKN1A-201ENST00000244741 ODF1Q14990 250 aa12.53□□□□□ -0.4
CDKN1A-201ENST00000244741 PRSS1P07477 247 aa12.52□□□□□ -0.4
CDKN1A-201ENST00000244741 PTTG1IPP53801 180 aa12.52□□□□□ -0.4
CDKN1A-201ENST00000244741 UBE2V1Q13404 147 aa12.52□□□□□ -0.4
CDKN1A-201ENST00000244741 C9orf66Q5T8R8 295 aa12.52□□□□□ -0.4
CDKN1A-201ENST00000244741 ERASQ7Z444 233 aa12.52□□□□□ -0.4
CDKN1A-201ENST00000244741 K7EQG2 157 aa12.52□□□□□ -0.41
CDKN1A-201ENST00000244741 GNRH2O43555 120 aa12.52□□□□□ -0.41
CDKN1A-201ENST00000244741 SMIM17P0DL12 118 aa12.52□□□□□ -0.41
CDKN1A-201ENST00000244741 S100A4P26447 101 aaKnown RBP12.52□□□□□ -0.41
CDKN1A-201ENST00000244741 ASIPP42127 132 aa12.52□□□□□ -0.41
CDKN1A-201ENST00000244741 PSMG4Q5JS54 123 aa12.52□□□□□ -0.41
CDKN1A-201ENST00000244741 APRG1Q8IVJ8 170 aa12.52□□□□□ -0.41
CDKN1A-201ENST00000244741 ZMAT4Q9H898 229 aa12.52□□□□□ -0.41
CDKN1A-201ENST00000244741 AGRNO00468 2067 aa12.51□□□□□ -0.41
CDKN1A-201ENST00000244741 LAGE3Q14657 143 aa12.51□□□□□ -0.41
CDKN1A-201ENST00000244741 MRAP2Q96G30 205 aa12.51□□□□□ -0.41
CDKN1A-201ENST00000244741 PCP2Q8IVA1 136 aa12.5□□□□□ -0.41
CDKN1A-201ENST00000244741 ZNF256Q9Y2P7 627 aaPredicted RBP12.5□□□□□ -0.41
CDKN1A-201ENST00000244741 NBEAL1Q6ZS30 2694 aa12.5□□□□□ -0.41
CDKN1A-201ENST00000244741 TMEM97Q5BJF2 176 aa12.5□□□□□ -0.41
CDKN1A-201ENST00000244741 HHLA3Q9XRX5 114 aa12.5□□□□□ -0.41
CDKN1A-201ENST00000244741 PHLDA3Q9Y5J5 127 aa12.5□□□□□ -0.41
CDKN1A-201ENST00000244741 NMUP48645 174 aa12.49□□□□□ -0.41
CDKN1A-201ENST00000244741 C14orf178Q8N769 122 aaPredicted RBP12.49□□□□□ -0.41
CDKN1A-201ENST00000244741 SPAG8Q99932 426 aaPredicted RBP12.49□□□□□ -0.41
CDKN1A-201ENST00000244741 CBY3A6NI87 242 aa12.49□□□□□ -0.41
CDKN1A-201ENST00000244741 CD7P09564 240 aa12.49□□□□□ -0.41
CDKN1A-201ENST00000244741 TRBV7-9A0A0J9YWB2 115 aa12.48□□□□□ -0.41
CDKN1A-201ENST00000244741 RNASE3P12724 160 aaKnown RBP12.48□□□□□ -0.41
CDKN1A-201ENST00000244741 ID1P41134 155 aa12.48□□□□□ -0.41
CDKN1A-201ENST00000244741 DEFB131AP59861 70 aa12.48□□□□□ -0.41
CDKN1A-201ENST00000244741 SNRPD3P62318 126 aaKnown RBP12.48□□□□□ -0.41
CDKN1A-201ENST00000244741 VAMP3Q15836 100 aa12.48□□□□□ -0.41
CDKN1A-201ENST00000244741 RASL10AQ92737 203 aa12.48□□□□□ -0.41
CDKN1A-201ENST00000244741 WFDC10AQ9H1F0 79 aa12.48□□□□□ -0.41
CDKN1A-201ENST00000244741 TRAV25A0A0B4J276 109 aa12.47□□□□□ -0.41
CDKN1A-201ENST00000244741 INSL3P51460 131 aa12.47□□□□□ -0.41
CDKN1A-201ENST00000244741 SMIM2Q9BVW6 85 aa12.47□□□□□ -0.41
CDKN1A-201ENST00000244741 DPH3P1Q9H4G8 78 aa12.47□□□□□ -0.41
CDKN1A-201ENST00000244741 IGKV2D-26A0A0A0MRZ7 120 aa12.47□□□□□ -0.41
CDKN1A-201ENST00000244741 G3V4G9 280 aa12.47□□□□□ -0.41
CDKN1A-201ENST00000244741 ATP5LO75964 103 aa12.47□□□□□ -0.41
CDKN1A-201ENST00000244741 IGKCP01834 107 aa12.47□□□□□ -0.41
CDKN1A-201ENST00000244741 MED14OSP0DP75 135 aa12.47□□□□□ -0.41
CDKN1A-201ENST00000244741 C7orf71A4D174 169 aa12.46□□□□□ -0.41
CDKN1A-201ENST00000244741 RPL39LQ96EH5 51 aaKnown RBP12.46□□□□□ -0.41
CDKN1A-201ENST00000244741 KLLNB2CW77 178 aa12.46□□□□□ -0.42
CDKN1A-201ENST00000244741 SIVA1O15304 175 aa12.46□□□□□ -0.42
CDKN1A-201ENST00000244741 IGKV3-20P01619 116 aa12.46□□□□□ -0.42
CDKN1A-201ENST00000244741 ODF3L2Q3SX64 289 aa12.46□□□□□ -0.42
CDKN1A-201ENST00000244741 MAP6D1Q9H9H5 199 aa12.46□□□□□ -0.42
CDKN1A-201ENST00000244741 KNCNA6PVL3 124 aa12.45□□□□□ -0.42
CDKN1A-201ENST00000244741 DPM2O94777 84 aa12.45□□□□□ -0.42
CDKN1A-201ENST00000244741 MGPP08493 103 aa12.45□□□□□ -0.42
CDKN1A-201ENST00000244741 SUMO2P61956 95 aaKnown RBP12.45□□□□□ -0.42
CDKN1A-201ENST00000244741 SEC11AP67812 179 aa12.45□□□□□ -0.42
CDKN1A-201ENST00000244741 MRPL35Q9NZE8 188 aaKnown RBP12.45□□□□□ -0.42
CDKN1A-201ENST00000244741 GTSCR1Q86UQ5 136 aa12.44□□□□□ -0.42
CDKN1A-201ENST00000244741 TTTY13Q9BZ97 58 aa12.44□□□□□ -0.42
CDKN1A-201ENST00000244741 KRTAP10-11P60412 298 aa12.43□□□□□ -0.42
CDKN1A-201ENST00000244741 BEAN1Q3B7T3 259 aa12.43□□□□□ -0.42
CDKN1A-201ENST00000244741 C20orf78Q9BR46 151 aa12.43□□□□□ -0.42
CDKN1A-201ENST00000244741 HSD52Q0P140 79 aa12.43□□□□□ -0.42
CDKN1A-201ENST00000244741 AMMECR1LQ6DCA0 310 aa12.43□□□□□ -0.42
CDKN1A-201ENST00000244741 ZC2HC1BQ5TFG8 222 aa12.42□□□□□ -0.42
CDKN1A-201ENST00000244741 AP1S3Q96PC3 154 aa12.42□□□□□ -0.42
CDKN1A-201ENST00000244741 A0A087WX48 190 aa12.42□□□□□ -0.42
CDKN1A-201ENST00000244741 TRAV2A0A0B4J234 112 aa12.42□□□□□ -0.42
CDKN1A-201ENST00000244741 TRAV12-3A0A0B4J271 114 aa12.42□□□□□ -0.42
CDKN1A-201ENST00000244741 OR11H12B2RN74 326 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms