RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 Q8N2B8 174 aa16.35■□□□□ 0.21
RNF39-201ENST00000244360 NHP2Q9NX24 153 aaKnown RBP16.35■□□□□ 0.21
RNF39-201ENST00000244360 CENPEQ02224 2701 aa16.35■□□□□ 0.21
RNF39-201ENST00000244360 A0A0J9YX75 114 aa16.34■□□□□ 0.21
RNF39-201ENST00000244360 ZNF688P0C7X2 276 aa16.34■□□□□ 0.21
RNF39-201ENST00000244360 SNRPD3P62318 126 aaKnown RBP16.34■□□□□ 0.21
RNF39-201ENST00000244360 LINC01549A6NIU2 74 aa16.34■□□□□ 0.21
RNF39-201ENST00000244360 OR11H12B2RN74 326 aa16.34■□□□□ 0.21
RNF39-201ENST00000244360 HOXD3P31249 432 aaPredicted RBP16.34■□□□□ 0.21
RNF39-201ENST00000244360 OR11H1Q8NG94 326 aa16.34■□□□□ 0.21
RNF39-201ENST00000244360 OR11H2Q8NH07 326 aa16.34■□□□□ 0.21
RNF39-201ENST00000244360 G3V4G9 280 aa16.33■□□□□ 0.2
RNF39-201ENST00000244360 SAP30O75446 220 aa16.33■□□□□ 0.2
RNF39-201ENST00000244360 MGPP08493 103 aa16.33■□□□□ 0.2
RNF39-201ENST00000244360 FAM159AQ6UWV7 190 aa16.33■□□□□ 0.2
RNF39-201ENST00000244360 KRTAP1-3Q8IUG1 177 aa16.33■□□□□ 0.2
RNF39-201ENST00000244360 RPL32P62910 135 aaKnown RBP16.33■□□□□ 0.2
RNF39-201ENST00000244360 C2orf66Q6UXQ4 117 aa16.33■□□□□ 0.2
RNF39-201ENST00000244360 RPL39LQ96EH5 51 aaKnown RBP16.33■□□□□ 0.2
RNF39-201ENST00000244360 KIF25-AS1Q9Y6Z4 181 aa16.33■□□□□ 0.2
RNF39-201ENST00000244360 CREBBPQ92793 2442 aa16.32■□□□□ 0.2
RNF39-201ENST00000244360 MYMXA0A1B0GTQ4 84 aa16.31■□□□□ 0.2
RNF39-201ENST00000244360 K7ERJ3 54 aa16.31■□□□□ 0.2
RNF39-201ENST00000244360 Q96MF0 132 aa16.31■□□□□ 0.2
RNF39-201ENST00000244360 E9PLD3 99 aa16.31■□□□□ 0.2
RNF39-201ENST00000244360 LINC00315P59091 139 aa16.31■□□□□ 0.2
RNF39-201ENST00000244360 HIST1H4GQ99525 98 aa16.31■□□□□ 0.2
RNF39-201ENST00000244360 BAALCQ8WXS3 180 aa16.3■□□□□ 0.2
RNF39-201ENST00000244360 TRAV12-3A0A0B4J271 114 aa16.3■□□□□ 0.2
RNF39-201ENST00000244360 CSTL1Q9H114 145 aa16.3■□□□□ 0.2
RNF39-201ENST00000244360 ABCA12Q86UK0 2595 aa16.29■□□□□ 0.2
RNF39-201ENST00000244360 MXRA5Q9NR99 2828 aa16.29■□□□□ 0.2
RNF39-201ENST00000244360 TRBV7-3A0A075B6L6 115 aa16.29■□□□□ 0.2
RNF39-201ENST00000244360 IGLL5B9A064 214 aa16.29■□□□□ 0.2
RNF39-201ENST00000244360 WFDC12Q8WWY7 111 aa16.29■□□□□ 0.2
RNF39-201ENST00000244360 MUC4Q99102 2169 aa16.29■□□□□ 0.2
RNF39-201ENST00000244360 C12orf74Q32Q52 190 aa16.28■□□□□ 0.2
RNF39-201ENST00000244360 CD7P09564 240 aa16.27■□□□□ 0.19
RNF39-201ENST00000244360 ZNF479Q96JC4 524 aa16.27■□□□□ 0.19
RNF39-201ENST00000244360 C9orf85Q96MD7 179 aa16.27■□□□□ 0.19
RNF39-201ENST00000244360 DUX5Q96PT3 197 aa16.27■□□□□ 0.19
RNF39-201ENST00000244360 DUSP14O95147 198 aaKnown RBP16.26■□□□□ 0.19
RNF39-201ENST00000244360 DOPEY2Q9Y3R5 2298 aa16.26■□□□□ 0.19
RNF39-201ENST00000244360 EPG5Q9HCE0 2579 aa16.26■□□□□ 0.19
RNF39-201ENST00000244360 IGHV3-16A0A0C4DH30 117 aa16.26■□□□□ 0.19
RNF39-201ENST00000244360 A0A1B0GWB2 263 aa16.26■□□□□ 0.19
RNF39-201ENST00000244360 PAPPA-AS1Q5QFB9 102 aa16.26■□□□□ 0.19
RNF39-201ENST00000244360 FOXI2Q6ZQN5 318 aa16.26■□□□□ 0.19
RNF39-201ENST00000244360 CYSLTR1Q9Y271 337 aa16.26■□□□□ 0.19
RNF39-201ENST00000244360 PRSS29PA6NIE9 313 aa16.25■□□□□ 0.19
RNF39-201ENST00000244360 TCTEX1D4Q5JR98 221 aa16.24■□□□□ 0.19
RNF39-201ENST00000244360 AMTNQ6UX39 209 aa16.24■□□□□ 0.19
RNF39-201ENST00000244360 F8W1H4 67 aa16.23■□□□□ 0.19
RNF39-201ENST00000244360 C18orf65Q6ZTR6 163 aa16.23■□□□□ 0.19
RNF39-201ENST00000244360 TRAV12-2A0A075B6T6 113 aa16.23■□□□□ 0.19
RNF39-201ENST00000244360 IGKV3-20P01619 116 aa16.23■□□□□ 0.19
RNF39-201ENST00000244360 PRADC1Q9BSG0 188 aa16.23■□□□□ 0.19
RNF39-201ENST00000244360 SLURP1P55000 103 aa16.22■□□□□ 0.19
RNF39-201ENST00000244360 JPT2Q9H910 190 aa16.22■□□□□ 0.19
RNF39-201ENST00000244360 IGHV1OR15-1A0A075B7D0 117 aa16.22■□□□□ 0.19
RNF39-201ENST00000244360 SCGB2A2Q13296 93 aa16.22■□□□□ 0.19
RNF39-201ENST00000244360 TMEM86BQ8N661 226 aa16.22■□□□□ 0.19
RNF39-201ENST00000244360 TMEM141Q96I45 108 aa16.22■□□□□ 0.19
RNF39-201ENST00000244360 SPINK13Q1W4C9 94 aa16.21■□□□□ 0.19
RNF39-201ENST00000244360 RRN3P1Q2M238 152 aa16.21■□□□□ 0.19
RNF39-201ENST00000244360 SUMO4Q6EEV6 95 aa16.21■□□□□ 0.19
RNF39-201ENST00000244360 TMEM238LA0A1B0GVL6 79 aa16.21■□□□□ 0.18
RNF39-201ENST00000244360 A6NJY4 79 aa16.21■□□□□ 0.18
RNF39-201ENST00000244360 VCYO14598 125 aa16.21■□□□□ 0.18
RNF39-201ENST00000244360 POLR2KP53803 58 aaKnown RBP16.21■□□□□ 0.18
RNF39-201ENST00000244360 HERVK_113P61574 105 aa16.21■□□□□ 0.18
RNF39-201ENST00000244360 DEFB136Q30KP8 78 aa16.21■□□□□ 0.18
RNF39-201ENST00000244360 Q8N1Y9 231 aa16.21■□□□□ 0.18
RNF39-201ENST00000244360 C4orf3Q8WVX3 66 aa16.21■□□□□ 0.18
RNF39-201ENST00000244360 KIR2DL4Q99706 377 aa16.21■□□□□ 0.18
RNF39-201ENST00000244360 TEX15Q9BXT5 2789 aa16.2■□□□□ 0.18
RNF39-201ENST00000244360 MDFICQ9P1T7 246 aa16.2■□□□□ 0.18
RNF39-201ENST00000244360 TRAV2A0A0B4J234 112 aa16.19■□□□□ 0.18
RNF39-201ENST00000244360 A8MTW9 85 aa16.19■□□□□ 0.18
RNF39-201ENST00000244360 ZFP2Q6ZN57 461 aa16.19■□□□□ 0.18
RNF39-201ENST00000244360 APCP25054 2843 aa16.19■□□□□ 0.18
RNF39-201ENST00000244360 ZNF815PA8K554 130 aa16.19■□□□□ 0.18
RNF39-201ENST00000244360 TIMM17AQ99595 171 aa16.19■□□□□ 0.18
RNF39-201ENST00000244360 TP53TG1Q9Y2A0 90 aa16.19■□□□□ 0.18
RNF39-201ENST00000244360 RPL24P83731 157 aaKnown RBP16.18■□□□□ 0.18
RNF39-201ENST00000244360 PMVKQ15126 192 aa16.18■□□□□ 0.18
RNF39-201ENST00000244360 SYT8Q8NBV8 401 aa16.18■□□□□ 0.18
RNF39-201ENST00000244360 A0A087WWL8 130 aa16.18■□□□□ 0.18
RNF39-201ENST00000244360 TRBV6-5A0A0K0K1A5 114 aa16.18■□□□□ 0.18
RNF39-201ENST00000244360 IGIPA6NJ69 53 aa16.18■□□□□ 0.18
RNF39-201ENST00000244360 RIPPLY3P57055 190 aa16.18■□□□□ 0.18
RNF39-201ENST00000244360 CRYGDP07320 174 aa16.17■□□□□ 0.18
RNF39-201ENST00000244360 TEX29Q8N6K0 151 aa16.17■□□□□ 0.18
RNF39-201ENST00000244360 PEMTQ9UBM1 199 aa16.17■□□□□ 0.18
RNF39-201ENST00000244360 SCGB1D4Q6XE38 83 aa16.16■□□□□ 0.18
RNF39-201ENST00000244360 TEX48A0A1B0GUV7 120 aa16.15■□□□□ 0.18
RNF39-201ENST00000244360 AGRNO00468 2067 aa16.15■□□□□ 0.18
RNF39-201ENST00000244360 IGLV4-69A0A075B6H9 119 aa16.15■□□□□ 0.18
RNF39-201ENST00000244360 TRBV27A0A0K0K1C4 114 aa16.15■□□□□ 0.18
RNF39-201ENST00000244360 J3QR89 54 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms