RNA–Protein interactions for RNA: ENST00000231238.9

TTC1-201, Transcript of tetratricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC1, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC1-201ENST00000231238 IQCJQ1A5X6 159 aa7.12□□□□□ -1.27
TTC1-201ENST00000231238 MRPL51Q4U2R6 128 aaKnown RBP7.12□□□□□ -1.27
TTC1-201ENST00000231238 RNASEKQ6P5S7 137 aaKnown RBP7.12□□□□□ -1.27
TTC1-201ENST00000231238 GATD1Q8NB37 220 aa7.12□□□□□ -1.27
TTC1-201ENST00000231238 SPATA3Q8NHX4 192 aa7.12□□□□□ -1.27
TTC1-201ENST00000231238 TMEM18Q96B42 140 aa7.12□□□□□ -1.27
TTC1-201ENST00000231238 PRELID3AQ96N28 172 aa7.12□□□□□ -1.27
TTC1-201ENST00000231238 RCHY1Q96PM5 261 aa7.12□□□□□ -1.27
TTC1-201ENST00000231238 MDFICQ9P1T7 246 aa7.12□□□□□ -1.27
TTC1-201ENST00000231238 ZMAT5Q9UDW3 170 aaKnown RBP7.12□□□□□ -1.27
TTC1-201ENST00000231238 TENM1Q9UKZ4 2725 aa7.12□□□□□ -1.27
TTC1-201ENST00000231238 IGHV4-4A0A075B6R2 117 aa7.11□□□□□ -1.27
TTC1-201ENST00000231238 HSBP1O75506 76 aa7.11□□□□□ -1.27
TTC1-201ENST00000231238 SERF1AO75920 110 aa7.11□□□□□ -1.27
TTC1-201ENST00000231238 PPBPP02775 128 aa7.11□□□□□ -1.27
TTC1-201ENST00000231238 FABP4P15090 132 aa7.11□□□□□ -1.27
TTC1-201ENST00000231238 ZNF575Q86XF7 245 aa7.11□□□□□ -1.27
TTC1-201ENST00000231238 HIST3H2BBQ8N257 126 aa7.11□□□□□ -1.27
TTC1-201ENST00000231238 C14orf178Q8N769 122 aaPredicted RBP7.11□□□□□ -1.27
TTC1-201ENST00000231238 PRSS3P2Q8NHM4 247 aa7.11□□□□□ -1.27
TTC1-201ENST00000231238 C18orf32Q8TCD1 76 aa7.11□□□□□ -1.27
TTC1-201ENST00000231238 DPH3P1Q9H4G8 78 aa7.11□□□□□ -1.27
TTC1-201ENST00000231238 NOTCH3Q9UM47 2321 aa7.11□□□□□ -1.27
TTC1-201ENST00000231238 F5H697 171 aa7.11□□□□□ -1.27
TTC1-201ENST00000231238 NCR2O95944 276 aa7.11□□□□□ -1.27
TTC1-201ENST00000231238 RBMY1A1P0DJD3 496 aaKnown RBP7.11□□□□□ -1.27
TTC1-201ENST00000231238 RBMY1CP0DJD4 496 aa7.11□□□□□ -1.27
TTC1-201ENST00000231238 RAB4AP20338 218 aa7.11□□□□□ -1.27
TTC1-201ENST00000231238 PMCHP20382 165 aa7.11□□□□□ -1.27
TTC1-201ENST00000231238 RBMY1FQ15415 496 aaKnown RBP7.11□□□□□ -1.27
TTC1-201ENST00000231238 ZNF876PQ49A33 203 aa7.11□□□□□ -1.27
TTC1-201ENST00000231238 COA6Q5JTJ3 125 aaKnown RBP7.11□□□□□ -1.27
TTC1-201ENST00000231238 FA2HQ7L5A8 372 aa7.11□□□□□ -1.27
TTC1-201ENST00000231238 CSTL1Q9H114 145 aa7.11□□□□□ -1.27
TTC1-201ENST00000231238 SCRT2Q9NQ03 307 aa7.11□□□□□ -1.27
TTC1-201ENST00000231238 LOC389332A0A1B0GUA5 103 aa7.1□□□□□ -1.27
TTC1-201ENST00000231238 SMKR1H3BMG3 65 aa7.1□□□□□ -1.27
TTC1-201ENST00000231238 SLPIP03973 132 aa7.1□□□□□ -1.27
TTC1-201ENST00000231238 FAM74A4Q5TZK3 123 aa7.1□□□□□ -1.27
TTC1-201ENST00000231238 C9orf85Q96MD7 179 aa7.1□□□□□ -1.27
TTC1-201ENST00000231238 MAP1LC3AQ9H492 121 aa7.1□□□□□ -1.27
TTC1-201ENST00000231238 GSN-AS1Q9NRJ2 163 aa7.1□□□□□ -1.27
TTC1-201ENST00000231238 A0A087WWL8 130 aa7.09□□□□□ -1.27
TTC1-201ENST00000231238 AMTP48728 403 aa7.09□□□□□ -1.27
TTC1-201ENST00000231238 APOC4P55056 127 aa7.09□□□□□ -1.27
TTC1-201ENST00000231238 ZNF56Q15929 161 aa7.09□□□□□ -1.27
TTC1-201ENST00000231238 OR10D4PQ8NGN7 298 aa7.09□□□□□ -1.27
TTC1-201ENST00000231238 MRAP2Q96G30 205 aa7.09□□□□□ -1.27
TTC1-201ENST00000231238 PACRGQ96M98 296 aaPredicted RBP7.09□□□□□ -1.27
TTC1-201ENST00000231238 LINC00467Q9BRT7 94 aa7.09□□□□□ -1.27
TTC1-201ENST00000231238 SPXQ9BT56 116 aa7.09□□□□□ -1.27
TTC1-201ENST00000231238 LAMTOR2Q9Y2Q5 125 aa7.09□□□□□ -1.27
TTC1-201ENST00000231238 M0R2P5 195 aa7.08□□□□□ -1.28
TTC1-201ENST00000231238 NXPH4O95158 308 aa7.08□□□□□ -1.28
TTC1-201ENST00000231238 RRN3P1Q2M238 152 aa7.08□□□□□ -1.28
TTC1-201ENST00000231238 NIT1Q86X76 327 aa7.08□□□□□ -1.28
TTC1-201ENST00000231238 C1orf158Q8N1D5 194 aa7.08□□□□□ -1.28
TTC1-201ENST00000231238 RNF185Q96GF1 192 aa7.08□□□□□ -1.28
TTC1-201ENST00000231238 HIST1H2BLQ99880 126 aa7.08□□□□□ -1.28
TTC1-201ENST00000231238 TRAV26-2A0A0B4J265 109 aa7.07□□□□□ -1.28
TTC1-201ENST00000231238 TNFRSF6BO95407 300 aa7.07□□□□□ -1.28
TTC1-201ENST00000231238 PPP1R17O96001 155 aa7.07□□□□□ -1.28
TTC1-201ENST00000231238 PRM2P04554 102 aa7.07□□□□□ -1.28
TTC1-201ENST00000231238 LINC00614P0C842 121 aa7.07□□□□□ -1.28
TTC1-201ENST00000231238 TMEM263Q8WUH6 116 aaKnown RBP7.07□□□□□ -1.28
TTC1-201ENST00000231238 CHCHD1Q96BP2 118 aaKnown RBP7.07□□□□□ -1.28
TTC1-201ENST00000231238 U3KQK5 164 aa7.07□□□□□ -1.28
TTC1-201ENST00000231238 TRGV1A0A0A0MS02 117 aa7.06□□□□□ -1.28
TTC1-201ENST00000231238 A8MWV9 139 aa7.06□□□□□ -1.28
TTC1-201ENST00000231238 NPYP01303 97 aa7.06□□□□□ -1.28
TTC1-201ENST00000231238 PTTG1IPP53801 180 aa7.06□□□□□ -1.28
TTC1-201ENST00000231238 C16orf74Q96GX8 76 aa7.06□□□□□ -1.28
TTC1-201ENST00000231238 JPT2Q9H910 190 aa7.06□□□□□ -1.28
TTC1-201ENST00000231238 MRPL16Q9NX20 251 aaKnown RBP7.06□□□□□ -1.28
TTC1-201ENST00000231238 NUPR1O60356 82 aa7.05□□□□□ -1.28
TTC1-201ENST00000231238 GATA1P15976 413 aaPredicted RBP7.05□□□□□ -1.28
TTC1-201ENST00000231238 AZU1P20160 251 aa7.05□□□□□ -1.28
TTC1-201ENST00000231238 IFI27P40305 119 aaPredicted RBP7.05□□□□□ -1.28
TTC1-201ENST00000231238 FAM19A2Q8N3H0 131 aa7.05□□□□□ -1.28
TTC1-201ENST00000231238 NXT2Q9NPJ8 142 aaKnown RBP7.05□□□□□ -1.28
TTC1-201ENST00000231238 STAB1Q9NY15 2570 aa7.05□□□□□ -1.28
TTC1-201ENST00000231238 COL6A5A8TX70 2615 aa7.05□□□□□ -1.28
TTC1-201ENST00000231238 IGHV3-73A0A0B4J1V6 119 aa7.04□□□□□ -1.28
TTC1-201ENST00000231238 KIR2DL5BA0A0G2JN68 375 aa7.04□□□□□ -1.28
TTC1-201ENST00000231238 KIR2DL5BA0A0G2JPC4 375 aa7.04□□□□□ -1.28
TTC1-201ENST00000231238 H7C1H1 209 aa7.04□□□□□ -1.28
TTC1-201ENST00000231238 ESDP10768 282 aa7.04□□□□□ -1.28
TTC1-201ENST00000231238 EMP1P54849 157 aa7.04□□□□□ -1.28
TTC1-201ENST00000231238 KIR2DL5AQ8N109 375 aa7.04□□□□□ -1.28
TTC1-201ENST00000231238 KIR2DL5BQ8NHK3 375 aa7.04□□□□□ -1.28
TTC1-201ENST00000231238 IFITM10A6NMD0 228 aa7.04□□□□□ -1.28
TTC1-201ENST00000231238 RHODO00212 210 aa7.04□□□□□ -1.28
TTC1-201ENST00000231238 GIG44P09565 113 aaPredicted RBP7.04□□□□□ -1.28
TTC1-201ENST00000231238 IGHV4-30-4P0DP06 118 aa7.04□□□□□ -1.28
TTC1-201ENST00000231238 KRTDAPP60985 99 aa7.04□□□□□ -1.28
TTC1-201ENST00000231238 PIK3CD-AS1Q5SR53 167 aa7.04□□□□□ -1.28
TTC1-201ENST00000231238 SUMO4Q6EEV6 95 aa7.04□□□□□ -1.28
TTC1-201ENST00000231238 C11orf72Q8NBR9 251 aa7.04□□□□□ -1.28
TTC1-201ENST00000231238 OR4C5Q8NGB2 326 aa7.04□□□□□ -1.28
TTC1-201ENST00000231238 RNASE8Q8TDE3 154 aaKnown RBP7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms