RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 TRAV4A0A0B4J268 109 aa9.95□□□□□ -0.82
SEC61B-201ENST00000223641 CIDEAO60543 219 aa9.95□□□□□ -0.82
SEC61B-201ENST00000223641 EVI2AP22794 236 aa9.95□□□□□ -0.82
SEC61B-201ENST00000223641 LINC00315P59091 139 aa9.95□□□□□ -0.82
SEC61B-201ENST00000223641 C12orf74Q32Q52 190 aa9.95□□□□□ -0.82
SEC61B-201ENST00000223641 AP1S3Q96PC3 154 aa9.95□□□□□ -0.82
SEC61B-201ENST00000223641 SAMD10Q9BYL1 202 aa9.95□□□□□ -0.82
SEC61B-201ENST00000223641 U3KQK5 164 aa9.95□□□□□ -0.82
SEC61B-201ENST00000223641 COLCA2A8K830 154 aa9.94□□□□□ -0.82
SEC61B-201ENST00000223641 S100A8P05109 93 aa9.94□□□□□ -0.82
SEC61B-201ENST00000223641 DEFB130BP0DP73 79 aa9.94□□□□□ -0.82
SEC61B-201ENST00000223641 DEFB130AP0DP74 79 aa9.94□□□□□ -0.82
SEC61B-201ENST00000223641 DAD1P61803 113 aa9.94□□□□□ -0.82
SEC61B-201ENST00000223641 ZFP2Q6ZN57 461 aa9.94□□□□□ -0.82
SEC61B-201ENST00000223641 C14orf178Q8N769 122 aaPredicted RBP9.94□□□□□ -0.82
SEC61B-201ENST00000223641 TRGV2A0A075B6R0 118 aa9.93□□□□□ -0.82
SEC61B-201ENST00000223641 CAMPP49913 170 aa9.93□□□□□ -0.82
SEC61B-201ENST00000223641 COX19Q49B96 90 aa9.93□□□□□ -0.82
SEC61B-201ENST00000223641 OR4C5Q8NGB2 326 aa9.93□□□□□ -0.82
SEC61B-201ENST00000223641 C11orf45Q8TAV5 145 aa9.93□□□□□ -0.82
SEC61B-201ENST00000223641 ZNF479Q96JC4 524 aa9.93□□□□□ -0.82
SEC61B-201ENST00000223641 DPH3P1Q9H4G8 78 aa9.93□□□□□ -0.82
SEC61B-201ENST00000223641 STAB2Q8WWQ8 2551 aa9.92□□□□□ -0.82
SEC61B-201ENST00000223641 RHODO00212 210 aa9.92□□□□□ -0.82
SEC61B-201ENST00000223641 TMEM136Q6ZRR5 245 aa9.92□□□□□ -0.82
SEC61B-201ENST00000223641 SMIM15Q7Z3B0 74 aa9.92□□□□□ -0.82
SEC61B-201ENST00000223641 FAM210BQ96KR6 192 aa9.92□□□□□ -0.82
SEC61B-201ENST00000223641 GNB1LQ9BYB4 327 aa9.92□□□□□ -0.82
SEC61B-201ENST00000223641 A0A087WWL8 130 aa9.91□□□□□ -0.82
SEC61B-201ENST00000223641 FHL2Q14192 279 aa9.91□□□□□ -0.82
SEC61B-201ENST00000223641 FAM104BQ5XKR9 115 aa9.91□□□□□ -0.82
SEC61B-201ENST00000223641 RNF185Q96GF1 192 aa9.91□□□□□ -0.82
SEC61B-201ENST00000223641 ATP5G1P05496 136 aa9.9□□□□□ -0.82
SEC61B-201ENST00000223641 SMIM17P0DL12 118 aa9.9□□□□□ -0.82
SEC61B-201ENST00000223641 RAB4AP20338 218 aa9.9□□□□□ -0.82
SEC61B-201ENST00000223641 NANOS2P60321 138 aaKnown RBP9.9□□□□□ -0.82
SEC61B-201ENST00000223641 Q6ZTC4 211 aa9.9□□□□□ -0.82
SEC61B-201ENST00000223641 AMN1Q8IY45 258 aa9.9□□□□□ -0.82
SEC61B-201ENST00000223641 FRZBQ92765 325 aa9.9□□□□□ -0.82
SEC61B-201ENST00000223641 IGHV3-53P01767 116 aa9.89□□□□□ -0.83
SEC61B-201ENST00000223641 HLA-DQA1P01909 254 aa9.89□□□□□ -0.83
SEC61B-201ENST00000223641 MT-ND6P03923 174 aa9.89□□□□□ -0.83
SEC61B-201ENST00000223641 HOXA5P20719 270 aa9.89□□□□□ -0.83
SEC61B-201ENST00000223641 RAB4BP61018 213 aa9.89□□□□□ -0.83
SEC61B-201ENST00000223641 FAM74A4Q5TZK3 123 aa9.89□□□□□ -0.83
SEC61B-201ENST00000223641 GATA1P15976 413 aaPredicted RBP9.88□□□□□ -0.83
SEC61B-201ENST00000223641 SLAQ13239 276 aa9.88□□□□□ -0.83
SEC61B-201ENST00000223641 Q6ZSN1 163 aa9.88□□□□□ -0.83
SEC61B-201ENST00000223641 DNAH7Q8WXX0 4024 aa9.87□□□□□ -0.83
SEC61B-201ENST00000223641 IGHV3-73A0A0B4J1V6 119 aa9.87□□□□□ -0.83
SEC61B-201ENST00000223641 TRBV6-4A0A1B0GX49 114 aa9.87□□□□□ -0.83
SEC61B-201ENST00000223641 MRPL51Q4U2R6 128 aaKnown RBP9.87□□□□□ -0.83
SEC61B-201ENST00000223641 TRGV4A0A0C4DH28 118 aa9.86□□□□□ -0.83
SEC61B-201ENST00000223641 M0QY20 66 aa9.86□□□□□ -0.83
SEC61B-201ENST00000223641 RAB5AP20339 215 aa9.86□□□□□ -0.83
SEC61B-201ENST00000223641 SUMO4Q6EEV6 95 aa9.86□□□□□ -0.83
SEC61B-201ENST00000223641 SLC25A29Q8N8R3 303 aa9.86□□□□□ -0.83
SEC61B-201ENST00000223641 MRAP2Q96G30 205 aa9.86□□□□□ -0.83
SEC61B-201ENST00000223641 PRO0255Q9UI72 69 aa9.86□□□□□ -0.83
SEC61B-201ENST00000223641 HHLA3Q9XRX5 114 aa9.86□□□□□ -0.83
SEC61B-201ENST00000223641 MGPP08493 103 aa9.85□□□□□ -0.83
SEC61B-201ENST00000223641 CRYBA4P53673 196 aa9.85□□□□□ -0.83
SEC61B-201ENST00000223641 ZNF56Q15929 161 aa9.85□□□□□ -0.83
SEC61B-201ENST00000223641 MRPL18Q9H0U6 180 aaKnown RBP9.85□□□□□ -0.83
SEC61B-201ENST00000223641 TGP01266 2768 aa9.84□□□□□ -0.83
SEC61B-201ENST00000223641 DEFB131BA0A096LNP1 70 aa9.84□□□□□ -0.83
SEC61B-201ENST00000223641 TRAV10A0A0B4J240 114 aa9.84□□□□□ -0.83
SEC61B-201ENST00000223641 F5H697 171 aa9.84□□□□□ -0.83
SEC61B-201ENST00000223641 F5H768 121 aa9.84□□□□□ -0.83
SEC61B-201ENST00000223641 PHOX2AO14813 284 aa9.84□□□□□ -0.83
SEC61B-201ENST00000223641 GAS8-AS1O95177 125 aa9.84□□□□□ -0.83
SEC61B-201ENST00000223641 APCSP02743 223 aa9.84□□□□□ -0.83
SEC61B-201ENST00000223641 PPBPP02775 128 aa9.84□□□□□ -0.83
SEC61B-201ENST00000223641 TRAPPC1Q9Y5R8 145 aa9.84□□□□□ -0.83
SEC61B-201ENST00000223641 DYNC2H1Q8NCM8 4307 aaKnown RBP9.84□□□□□ -0.83
SEC61B-201ENST00000223641 TRAV26-2A0A0B4J265 109 aa9.83□□□□□ -0.84
SEC61B-201ENST00000223641 TRBV10-1A0A0K0K1A3 114 aa9.83□□□□□ -0.84
SEC61B-201ENST00000223641 H3BNG1 76 aa9.83□□□□□ -0.84
SEC61B-201ENST00000223641 H7C1H1 209 aa9.83□□□□□ -0.84
SEC61B-201ENST00000223641 K7EQD1 137 aa9.83□□□□□ -0.84
SEC61B-201ENST00000223641 RPS10P46783 165 aaKnown RBP9.83□□□□□ -0.84
SEC61B-201ENST00000223641 FABP9Q0Z7S8 132 aa9.83□□□□□ -0.84
SEC61B-201ENST00000223641 RHOHQ15669 191 aa9.83□□□□□ -0.84
SEC61B-201ENST00000223641 NRACQ8N912 160 aa9.83□□□□□ -0.84
SEC61B-201ENST00000223641 VSIG2Q96IQ7 327 aa9.83□□□□□ -0.84
SEC61B-201ENST00000223641 Q9UF83 564 aa9.83□□□□□ -0.84
SEC61B-201ENST00000223641 CSMD3Q7Z407 3707 aa9.82□□□□□ -0.84
SEC61B-201ENST00000223641 TRBV6-5A0A0K0K1A5 114 aa9.82□□□□□ -0.84
SEC61B-201ENST00000223641 D6R8Y8 96 aa9.82□□□□□ -0.84
SEC61B-201ENST00000223641 P0DMU3 169 aa9.82□□□□□ -0.84
SEC61B-201ENST00000223641 FAM231AP0DMU4 169 aa9.82□□□□□ -0.84
SEC61B-201ENST00000223641 FAM231CP0DMU5 169 aa9.82□□□□□ -0.84
SEC61B-201ENST00000223641 HTN3P15516 51 aa9.82□□□□□ -0.84
SEC61B-201ENST00000223641 CKS2P33552 79 aa9.82□□□□□ -0.84
SEC61B-201ENST00000223641 ORMDL3Q8N138 153 aa9.82□□□□□ -0.84
SEC61B-201ENST00000223641 PHLDA1Q8WV24 401 aaPredicted RBP9.82□□□□□ -0.84
SEC61B-201ENST00000223641 NIT2Q9NQR4 276 aa9.82□□□□□ -0.84
SEC61B-201ENST00000223641 TRAV26-1A0A087WT03 109 aa9.81□□□□□ -0.84
SEC61B-201ENST00000223641 SMKR1H3BMG3 65 aa9.81□□□□□ -0.84
SEC61B-201ENST00000223641 TRGC2P03986 189 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms