RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 TAL2Q16559 108 aa8.92□□□□□ -0.98
NOD1-201ENST00000222823 APRG1Q8IVJ8 170 aa8.92□□□□□ -0.98
NOD1-201ENST00000222823 USP9YO00507 2555 aaPredicted RBP8.92□□□□□ -0.98
NOD1-201ENST00000222823 INAFM2P0DMQ5 153 aa8.91□□□□□ -0.98
NOD1-201ENST00000222823 ZNF48Q96MX3 618 aaPredicted RBP8.91□□□□□ -0.98
NOD1-201ENST00000222823 SPINK8P0C7L1 97 aa8.91□□□□□ -0.98
NOD1-201ENST00000222823 ABCA12Q86UK0 2595 aa8.9□□□□□ -0.98
NOD1-201ENST00000222823 PRAC2D3DTV9 90 aa8.9□□□□□ -0.98
NOD1-201ENST00000222823 SIVA1O15304 175 aa8.9□□□□□ -0.98
NOD1-201ENST00000222823 NUPR1O60356 82 aa8.9□□□□□ -0.98
NOD1-201ENST00000222823 CEND1Q8N111 149 aa8.9□□□□□ -0.98
NOD1-201ENST00000222823 DSCAML1Q8TD84 2053 aa8.9□□□□□ -0.98
NOD1-201ENST00000222823 UNC80Q8N2C7 3258 aa8.9□□□□□ -0.98
NOD1-201ENST00000222823 WI2-2373I1.2A0A1W2PRP0 233 aa8.9□□□□□ -0.99
NOD1-201ENST00000222823 NPSP0C0P6 89 aa8.9□□□□□ -0.99
NOD1-201ENST00000222823 PCP2Q8IVA1 136 aa8.9□□□□□ -0.99
NOD1-201ENST00000222823 RPL39LQ96EH5 51 aaKnown RBP8.9□□□□□ -0.99
NOD1-201ENST00000222823 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.89□□□□□ -0.99
NOD1-201ENST00000222823 KIR2DL5BA0A0G2JN68 375 aa8.89□□□□□ -0.99
NOD1-201ENST00000222823 KIR2DL5BA0A0G2JPC4 375 aa8.89□□□□□ -0.99
NOD1-201ENST00000222823 IGKV2-29A2NJV5 120 aaPredicted RBP8.89□□□□□ -0.99
NOD1-201ENST00000222823 H3BMM0 161 aa8.89□□□□□ -0.99
NOD1-201ENST00000222823 K7EP13 123 aa8.89□□□□□ -0.99
NOD1-201ENST00000222823 CLPSL2Q6UWE3 100 aa8.89□□□□□ -0.99
NOD1-201ENST00000222823 KIR2DL5AQ8N109 375 aa8.89□□□□□ -0.99
NOD1-201ENST00000222823 UBE2WQ96B02 151 aa8.89□□□□□ -0.99
NOD1-201ENST00000222823 RANBP2P49792 3224 aaKnown RBP8.89□□□□□ -0.99
NOD1-201ENST00000222823 SOCS3O14543 225 aa8.89□□□□□ -0.99
NOD1-201ENST00000222823 A0A0J9YY99 117 aa8.89□□□□□ -0.99
NOD1-201ENST00000222823 IGHG2P01859 326 aa8.89□□□□□ -0.99
NOD1-201ENST00000222823 GTSF1Q8WW33 167 aa8.89□□□□□ -0.99
NOD1-201ENST00000222823 FANCD2OSQ96PS1 177 aa8.89□□□□□ -0.99
NOD1-201ENST00000222823 HCFC1P51610 2035 aa8.89□□□□□ -0.99
NOD1-201ENST00000222823 A0A1W2PPM0 123 aa8.88□□□□□ -0.99
NOD1-201ENST00000222823 NKAPP1Q8N9T2 125 aa8.88□□□□□ -0.99
NOD1-201ENST00000222823 PPDPFLQ8WWR9 84 aa8.88□□□□□ -0.99
NOD1-201ENST00000222823 SIRPDQ9H106 197 aa8.88□□□□□ -0.99
NOD1-201ENST00000222823 F8W1H4 67 aa8.88□□□□□ -0.99
NOD1-201ENST00000222823 H3BMG7 143 aa8.88□□□□□ -0.99
NOD1-201ENST00000222823 K7EMT4 169 aa8.88□□□□□ -0.99
NOD1-201ENST00000222823 UTF1Q5T230 341 aa8.88□□□□□ -0.99
NOD1-201ENST00000222823 AMTNQ6UX39 209 aa8.88□□□□□ -0.99
NOD1-201ENST00000222823 C1orf229Q6ZS94 237 aaPredicted RBP8.88□□□□□ -0.99
NOD1-201ENST00000222823 K7EP34 96 aa8.88□□□□□ -0.99
NOD1-201ENST00000222823 K7ERJ3 54 aa8.88□□□□□ -0.99
NOD1-201ENST00000222823 IGHV4OR15-8A0A075B7B6 117 aa8.88□□□□□ -0.99
NOD1-201ENST00000222823 A0A087WW49 117 aa8.88□□□□□ -0.99
NOD1-201ENST00000222823 LINC00173Q6ZV60 143 aa8.88□□□□□ -0.99
NOD1-201ENST00000222823 XCL1P47992 114 aa8.87□□□□□ -0.99
NOD1-201ENST00000222823 C12orf74Q32Q52 190 aa8.87□□□□□ -0.99
NOD1-201ENST00000222823 SUMO4Q6EEV6 95 aa8.87□□□□□ -0.99
NOD1-201ENST00000222823 RNF152Q8N8N0 203 aa8.87□□□□□ -0.99
NOD1-201ENST00000222823 DSCAMO60469 2012 aa8.87□□□□□ -0.99
NOD1-201ENST00000222823 GPHB5Q86YW7 130 aa8.87□□□□□ -0.99
NOD1-201ENST00000222823 C2orf70A6NJV1 201 aa8.87□□□□□ -0.99
NOD1-201ENST00000222823 SPANXA1Q9NS26 97 aa8.87□□□□□ -0.99
NOD1-201ENST00000222823 TRAV13-2A0A0B4J235 113 aa8.86□□□□□ -0.99
NOD1-201ENST00000222823 C9orf47Q6ZRZ4 202 aa8.86□□□□□ -0.99
NOD1-201ENST00000222823 PIFOQ8TCI5 191 aa8.86□□□□□ -0.99
NOD1-201ENST00000222823 SCRT2Q9NQ03 307 aa8.86□□□□□ -0.99
NOD1-201ENST00000222823 ANKRD11Q6UB99 2663 aaPredicted RBP8.86□□□□□ -0.99
NOD1-201ENST00000222823 CDK2AP2O75956 126 aa8.86□□□□□ -0.99
NOD1-201ENST00000222823 Q9H8V8 135 aa8.86□□□□□ -0.99
NOD1-201ENST00000222823 ZNF503Q96F45 646 aa8.86□□□□□ -0.99
NOD1-201ENST00000222823 TRANK1O15050 2925 aa8.86□□□□□ -0.99
NOD1-201ENST00000222823 A0A0J9YXV3 536 aa8.86□□□□□ -0.99
NOD1-201ENST00000222823 DEFB1P60022 68 aa8.86□□□□□ -0.99
NOD1-201ENST00000222823 ANKRD39Q53RE8 183 aa8.86□□□□□ -0.99
NOD1-201ENST00000222823 C22orf34Q6ZV56 151 aa8.86□□□□□ -0.99
NOD1-201ENST00000222823 Q8N1Y9 231 aa8.86□□□□□ -0.99
NOD1-201ENST00000222823 ZFP2Q6ZN57 461 aa8.85□□□□□ -0.99
NOD1-201ENST00000222823 C5orf38Q86SI9 138 aa8.85□□□□□ -0.99
NOD1-201ENST00000222823 LMO4P61968 165 aa8.85□□□□□ -0.99
NOD1-201ENST00000222823 LINC01545Q5VT33 79 aa8.85□□□□□ -0.99
NOD1-201ENST00000222823 TMEM126AQ9H061 195 aa8.85□□□□□ -0.99
NOD1-201ENST00000222823 TDRG1Q3Y452 100 aa8.85□□□□□ -0.99
NOD1-201ENST00000222823 RMI2Q96E14 147 aa8.85□□□□□ -0.99
NOD1-201ENST00000222823 C9orf66Q5T8R8 295 aa8.84□□□□□ -0.99
NOD1-201ENST00000222823 FRMD6-AS1P0C7T7 363 aa8.84□□□□□ -0.99
NOD1-201ENST00000222823 CFC1BP0CG36 223 aa8.84□□□□□ -0.99
NOD1-201ENST00000222823 CFC1P0CG37 223 aa8.84□□□□□ -0.99
NOD1-201ENST00000222823 UNQ9165/PRO28630Q6UXU0 137 aa8.84□□□□□ -0.99
NOD1-201ENST00000222823 IGKV1D-37A0A075B6S9 117 aa8.84□□□□□ -0.99
NOD1-201ENST00000222823 FN1P02751 2386 aaKnown RBP8.84□□□□□ -0.99
NOD1-201ENST00000222823 Q6ZQT7 251 aa8.84□□□□□ -1
NOD1-201ENST00000222823 CARD19Q96LW7 228 aa8.84□□□□□ -1
NOD1-201ENST00000222823 SLC25A29Q8N8R3 303 aa8.83□□□□□ -1
NOD1-201ENST00000222823 EDA2RQ9HAV5 297 aa8.83□□□□□ -1
NOD1-201ENST00000222823 TMEM89A2RUT3 159 aa8.83□□□□□ -1
NOD1-201ENST00000222823 BOD1L2Q8IYS8 172 aa8.83□□□□□ -1
NOD1-201ENST00000222823 DEFB125Q8N687 156 aa8.83□□□□□ -1
NOD1-201ENST00000222823 UBL5Q9BZL1 73 aa8.83□□□□□ -1
NOD1-201ENST00000222823 GYPEP15421 78 aa8.83□□□□□ -1
NOD1-201ENST00000222823 CTRLP40313 264 aa8.83□□□□□ -1
NOD1-201ENST00000222823 Q6ZVH6 145 aa8.83□□□□□ -1
NOD1-201ENST00000222823 ATP6V0E2Q8NHE4 81 aa8.83□□□□□ -1
NOD1-201ENST00000222823 C16orf74Q96GX8 76 aa8.83□□□□□ -1
NOD1-201ENST00000222823 TNRC6BQ9UPQ9 1833 aaKnown RBP8.83□□□□□ -1
NOD1-201ENST00000222823 TMEM61Q8N0U2 210 aa8.82□□□□□ -1
NOD1-201ENST00000222823 CRLF1O75462 422 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms