RNA–Protein interactions for RNA: ENST00000218388.8

TIMP1-201, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP1, Length 892 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-201ENST00000218388 NUP35Q8NFH5 326 aa9.32□□□□□ -0.92
TIMP1-201ENST00000218388 IMMP2LQ96T52 175 aa9.32□□□□□ -0.92
TIMP1-201ENST00000218388 S100PP25815 95 aa9.31□□□□□ -0.92
TIMP1-201ENST00000218388 ZFP2Q6ZN57 461 aa9.31□□□□□ -0.92
TIMP1-201ENST00000218388 ZNF479Q96JC4 524 aa9.31□□□□□ -0.92
TIMP1-201ENST00000218388 KLK5Q9Y337 293 aaPredicted RBP9.31□□□□□ -0.92
TIMP1-201ENST00000218388 A0A1B0GW15 77 aa9.3□□□□□ -0.92
TIMP1-201ENST00000218388 FAM74A4Q5TZK3 123 aa9.3□□□□□ -0.92
TIMP1-201ENST00000218388 POM121L12Q8N7R1 296 aa9.3□□□□□ -0.92
TIMP1-201ENST00000218388 FAM210BQ96KR6 192 aa9.3□□□□□ -0.92
TIMP1-201ENST00000218388 A0A087WWL8 130 aa9.29□□□□□ -0.92
TIMP1-201ENST00000218388 S100A8P05109 93 aa9.29□□□□□ -0.92
TIMP1-201ENST00000218388 CEMP1Q6PRD7 247 aaPredicted RBP9.29□□□□□ -0.92
TIMP1-201ENST00000218388 ATP5L2Q7Z4Y8 100 aa9.29□□□□□ -0.92
TIMP1-201ENST00000218388 C14orf178Q8N769 122 aaPredicted RBP9.29□□□□□ -0.92
TIMP1-201ENST00000218388 BTF3L4Q96K17 158 aa9.29□□□□□ -0.92
TIMP1-201ENST00000218388 DPH3P1Q9H4G8 78 aa9.29□□□□□ -0.92
TIMP1-201ENST00000218388 JPT2Q9H910 190 aa9.29□□□□□ -0.92
TIMP1-201ENST00000218388 PRO0255Q9UI72 69 aa9.29□□□□□ -0.92
TIMP1-201ENST00000218388 NACAE9PAV3 2078 aa9.28□□□□□ -0.92
TIMP1-201ENST00000218388 TRAV9-1A0A075B6T8 112 aa9.28□□□□□ -0.92
TIMP1-201ENST00000218388 IGHV3-73A0A0B4J1V6 119 aa9.28□□□□□ -0.92
TIMP1-201ENST00000218388 C3orf84H3BNL1 204 aa9.28□□□□□ -0.92
TIMP1-201ENST00000218388 FAM3BP58499 235 aaPredicted RBP9.28□□□□□ -0.92
TIMP1-201ENST00000218388 FHL2Q14192 279 aa9.28□□□□□ -0.92
TIMP1-201ENST00000218388 MSRB1Q9NZV6 116 aa9.28□□□□□ -0.92
TIMP1-201ENST00000218388 HHLA3Q9XRX5 114 aa9.28□□□□□ -0.92
TIMP1-201ENST00000218388 CRYGDP07320 174 aa9.27□□□□□ -0.93
TIMP1-201ENST00000218388 HOXA5P20719 270 aa9.27□□□□□ -0.93
TIMP1-201ENST00000218388 HBBP68871 147 aa9.27□□□□□ -0.93
TIMP1-201ENST00000218388 ZNF56Q15929 161 aa9.27□□□□□ -0.93
TIMP1-201ENST00000218388 UFSP1Q6NVU6 142 aa9.27□□□□□ -0.93
TIMP1-201ENST00000218388 MRPL54Q6P161 138 aaKnown RBP9.27□□□□□ -0.93
TIMP1-201ENST00000218388 SAMD10Q9BYL1 202 aa9.27□□□□□ -0.93
TIMP1-201ENST00000218388 TRAV26-1A0A087WT03 109 aa9.26□□□□□ -0.93
TIMP1-201ENST00000218388 TRBV6-4A0A1B0GX49 114 aa9.26□□□□□ -0.93
TIMP1-201ENST00000218388 IGLL5B9A064 214 aa9.26□□□□□ -0.93
TIMP1-201ENST00000218388 F5H697 171 aa9.26□□□□□ -0.93
TIMP1-201ENST00000218388 H3BNG1 76 aa9.26□□□□□ -0.93
TIMP1-201ENST00000218388 PAX4O43316 350 aa9.26□□□□□ -0.93
TIMP1-201ENST00000218388 MGPP08493 103 aa9.26□□□□□ -0.93
TIMP1-201ENST00000218388 GATA1P15976 413 aaPredicted RBP9.26□□□□□ -0.93
TIMP1-201ENST00000218388 EVI2AP22794 236 aa9.26□□□□□ -0.93
TIMP1-201ENST00000218388 RAB4BP61018 213 aa9.26□□□□□ -0.93
TIMP1-201ENST00000218388 RHOHQ15669 191 aa9.26□□□□□ -0.93
TIMP1-201ENST00000218388 ZFAND6Q6FIF0 208 aa9.26□□□□□ -0.93
TIMP1-201ENST00000218388 PRADC1Q9BSG0 188 aa9.26□□□□□ -0.93
TIMP1-201ENST00000218388 TMEM191AQ9H0A3 160 aa9.26□□□□□ -0.93
TIMP1-201ENST00000218388 K7EQD1 137 aa9.25□□□□□ -0.93
TIMP1-201ENST00000218388 CAMPP49913 170 aa9.25□□□□□ -0.93
TIMP1-201ENST00000218388 CRYBA4P53673 196 aa9.25□□□□□ -0.93
TIMP1-201ENST00000218388 TCTAP57738 103 aa9.25□□□□□ -0.93
TIMP1-201ENST00000218388 TMEM88Q6PEY1 159 aa9.25□□□□□ -0.93
TIMP1-201ENST00000218388 C15orf53Q8NAA6 179 aa9.25□□□□□ -0.93
TIMP1-201ENST00000218388 KIF25-AS1Q9Y6Z4 181 aa9.25□□□□□ -0.93
TIMP1-201ENST00000218388 URGCP-MRPS24S4R325 110 aa9.25□□□□□ -0.93
TIMP1-201ENST00000218388 DNAH7Q8WXX0 4024 aa9.24□□□□□ -0.93
TIMP1-201ENST00000218388 A0A0J9YY99 117 aa9.24□□□□□ -0.93
TIMP1-201ENST00000218388 A0A1B0GXF2 115 aa9.24□□□□□ -0.93
TIMP1-201ENST00000218388 H7C1H1 209 aa9.24□□□□□ -0.93
TIMP1-201ENST00000218388 RASL11AQ6T310 242 aa9.24□□□□□ -0.93
TIMP1-201ENST00000218388 SLC25A29Q8N8R3 303 aa9.24□□□□□ -0.93
TIMP1-201ENST00000218388 S100A1P23297 94 aa9.23□□□□□ -0.93
TIMP1-201ENST00000218388 FRZBQ92765 325 aa9.23□□□□□ -0.93
TIMP1-201ENST00000218388 SMCO4Q9NRQ5 59 aa9.23□□□□□ -0.93
TIMP1-201ENST00000218388 ICOSQ9Y6W8 199 aa9.23□□□□□ -0.93
TIMP1-201ENST00000218388 TRBV10-1A0A0K0K1A3 114 aa9.22□□□□□ -0.93
TIMP1-201ENST00000218388 ATP6V1G1O75348 118 aa9.22□□□□□ -0.93
TIMP1-201ENST00000218388 GYPEP15421 78 aa9.22□□□□□ -0.93
TIMP1-201ENST00000218388 LINC00315P59091 139 aa9.22□□□□□ -0.93
TIMP1-201ENST00000218388 MRPL23Q16540 153 aaKnown RBP9.22□□□□□ -0.93
TIMP1-201ENST00000218388 COX19Q49B96 90 aa9.22□□□□□ -0.93
TIMP1-201ENST00000218388 CASC10Q5T4H9 136 aa9.22□□□□□ -0.93
TIMP1-201ENST00000218388 ATRAIDQ6UW56 229 aa9.22□□□□□ -0.93
TIMP1-201ENST00000218388 GATD1Q8NB37 220 aa9.22□□□□□ -0.93
TIMP1-201ENST00000218388 VSIG2Q96IQ7 327 aa9.22□□□□□ -0.93
TIMP1-201ENST00000218388 NUDT3O95989 172 aa9.21□□□□□ -0.94
TIMP1-201ENST00000218388 SRIP30626 198 aa9.21□□□□□ -0.94
TIMP1-201ENST00000218388 SUMO4Q6EEV6 95 aa9.21□□□□□ -0.94
TIMP1-201ENST00000218388 SH2D6Q7Z4S9 175 aa9.21□□□□□ -0.94
TIMP1-201ENST00000218388 AMN1Q8IY45 258 aa9.21□□□□□ -0.94
TIMP1-201ENST00000218388 RPL36AP83881 106 aaKnown RBP9.2□□□□□ -0.94
TIMP1-201ENST00000218388 FAM104BQ5XKR9 115 aa9.2□□□□□ -0.94
TIMP1-201ENST00000218388 Q6ZSN1 163 aa9.2□□□□□ -0.94
TIMP1-201ENST00000218388 RPL36ALQ969Q0 106 aaKnown RBP9.2□□□□□ -0.94
TIMP1-201ENST00000218388 MRAP2Q96G30 205 aa9.2□□□□□ -0.94
TIMP1-201ENST00000218388 M0QY20 66 aa9.19□□□□□ -0.94
TIMP1-201ENST00000218388 RAB4AP20338 218 aa9.19□□□□□ -0.94
TIMP1-201ENST00000218388 ELOBQ15370 118 aa9.19□□□□□ -0.94
TIMP1-201ENST00000218388 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.19□□□□□ -0.94
TIMP1-201ENST00000218388 DNAJC30Q96LL9 226 aa9.19□□□□□ -0.94
TIMP1-201ENST00000218388 TRBV7-3A0A075B6L6 115 aa9.18□□□□□ -0.94
TIMP1-201ENST00000218388 TRBV24-1A0A075B6N3 115 aa9.18□□□□□ -0.94
TIMP1-201ENST00000218388 GAGE12JA6NER3 117 aa9.18□□□□□ -0.94
TIMP1-201ENST00000218388 PPP1R17O96001 155 aa9.18□□□□□ -0.94
TIMP1-201ENST00000218388 HLA-DQA1P01909 254 aa9.18□□□□□ -0.94
TIMP1-201ENST00000218388 MT-ND6P03923 174 aa9.18□□□□□ -0.94
TIMP1-201ENST00000218388 GAGE1Q13065 139 aa9.18□□□□□ -0.94
TIMP1-201ENST00000218388 GAGE4Q13068 117 aa9.18□□□□□ -0.94
TIMP1-201ENST00000218388 GAGE5Q13069 117 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms