RNA–Protein interactions for RNA: ENST00000217109.8

CSTF1-201, Transcript of cleavage stimulation factor subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF1, Length 4,290 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-201ENST00000217109 PRR9Q5T870 116 aa7.42□□□□□ -1.22
CSTF1-201ENST00000217109 C10orf99Q6UWK7 81 aa7.42□□□□□ -1.22
CSTF1-201ENST00000217109 KLHL30-AS1Q8NEE0 82 aa7.42□□□□□ -1.22
CSTF1-201ENST00000217109 PHLDA1Q8WV24 401 aaPredicted RBP7.42□□□□□ -1.22
CSTF1-201ENST00000217109 IGHV1OR15-1A0A075B7D0 117 aa7.42□□□□□ -1.22
CSTF1-201ENST00000217109 MYMXA0A1B0GTQ4 84 aa7.42□□□□□ -1.22
CSTF1-201ENST00000217109 SAP30O75446 220 aa7.42□□□□□ -1.22
CSTF1-201ENST00000217109 RPL39P62891 51 aaKnown RBP7.42□□□□□ -1.22
CSTF1-201ENST00000217109 C20orf78Q9BR46 151 aa7.42□□□□□ -1.22
CSTF1-201ENST00000217109 SIVA1O15304 175 aa7.41□□□□□ -1.22
CSTF1-201ENST00000217109 GAGE13Q4V321 117 aa7.41□□□□□ -1.22
CSTF1-201ENST00000217109 CEND1Q8N111 149 aa7.41□□□□□ -1.22
CSTF1-201ENST00000217109 PEMTQ9UBM1 199 aa7.41□□□□□ -1.22
CSTF1-201ENST00000217109 IGHV3-16A0A0C4DH30 117 aa7.41□□□□□ -1.22
CSTF1-201ENST00000217109 H3BMG7 143 aa7.41□□□□□ -1.22
CSTF1-201ENST00000217109 K7EP34 96 aa7.41□□□□□ -1.22
CSTF1-201ENST00000217109 SPXQ9BT56 116 aa7.41□□□□□ -1.22
CSTF1-201ENST00000217109 NPC2P61916 151 aa7.41□□□□□ -1.22
CSTF1-201ENST00000217109 ETDBQ3ZM63 59 aa7.41□□□□□ -1.22
CSTF1-201ENST00000217109 GATD1Q8NB37 220 aa7.41□□□□□ -1.22
CSTF1-201ENST00000217109 IGHV3-53P01767 116 aa7.41□□□□□ -1.22
CSTF1-201ENST00000217109 GATA3P23771 443 aa7.41□□□□□ -1.22
CSTF1-201ENST00000217109 HOXD3P31249 432 aaPredicted RBP7.41□□□□□ -1.22
CSTF1-201ENST00000217109 ADAMTSL5Q6ZMM2 481 aa7.41□□□□□ -1.22
CSTF1-201ENST00000217109 U3KQK5 164 aa7.41□□□□□ -1.22
CSTF1-201ENST00000217109 A0A096LNJ9 63 aa7.4□□□□□ -1.22
CSTF1-201ENST00000217109 H3BUA1 57 aa7.4□□□□□ -1.22
CSTF1-201ENST00000217109 PMVKQ15126 192 aa7.4□□□□□ -1.22
CSTF1-201ENST00000217109 RNASE13Q5GAN3 156 aaKnown RBP7.4□□□□□ -1.22
CSTF1-201ENST00000217109 STHQ8IWL8 128 aa7.4□□□□□ -1.22
CSTF1-201ENST00000217109 XCL2Q9UBD3 114 aa7.4□□□□□ -1.22
CSTF1-201ENST00000217109 A6NDX4 124 aa7.4□□□□□ -1.22
CSTF1-201ENST00000217109 LINC01549A6NIU2 74 aa7.4□□□□□ -1.22
CSTF1-201ENST00000217109 IGHG4P01861 327 aa7.4□□□□□ -1.22
CSTF1-201ENST00000217109 C2orf91Q6ZV80 131 aa7.4□□□□□ -1.22
CSTF1-201ENST00000217109 ZFAND2AQ8N6M9 145 aa7.4□□□□□ -1.23
CSTF1-201ENST00000217109 SUMO4Q6EEV6 95 aa7.39□□□□□ -1.23
CSTF1-201ENST00000217109 MDFICQ9P1T7 246 aa7.39□□□□□ -1.23
CSTF1-201ENST00000217109 IGHV3-38A0A0C4DH36 116 aa7.39□□□□□ -1.23
CSTF1-201ENST00000217109 RRN3P1Q2M238 152 aa7.39□□□□□ -1.23
CSTF1-201ENST00000217109 C12orf74Q32Q52 190 aa7.39□□□□□ -1.23
CSTF1-201ENST00000217109 Q5PR19 223 aa7.39□□□□□ -1.23
CSTF1-201ENST00000217109 SMAGPQ0VAQ4 97 aa7.39□□□□□ -1.23
CSTF1-201ENST00000217109 Q8N1Y9 231 aa7.39□□□□□ -1.23
CSTF1-201ENST00000217109 SLURP1P55000 103 aa7.38□□□□□ -1.23
CSTF1-201ENST00000217109 SRSF2Q01130 221 aaKnown RBP7.38□□□□□ -1.23
CSTF1-201ENST00000217109 RASL10AQ92737 203 aa7.38□□□□□ -1.23
CSTF1-201ENST00000217109 TRPT1Q86TN4 253 aaKnown RBP7.38□□□□□ -1.23
CSTF1-201ENST00000217109 GTSF1LQ9H1H1 148 aa7.38□□□□□ -1.23
CSTF1-201ENST00000217109 COL12A1Q99715 3063 aa7.38□□□□□ -1.23
CSTF1-201ENST00000217109 IGHV4OR15-8A0A075B7B6 117 aa7.38□□□□□ -1.23
CSTF1-201ENST00000217109 A0A087WW49 117 aa7.38□□□□□ -1.23
CSTF1-201ENST00000217109 EDN2P20800 178 aa7.38□□□□□ -1.23
CSTF1-201ENST00000217109 HIST2H2BDQ6DRA6 164 aa7.38□□□□□ -1.23
CSTF1-201ENST00000217109 Q96MF0 132 aa7.38□□□□□ -1.23
CSTF1-201ENST00000217109 TRGV1A0A0A0MS02 117 aa7.38□□□□□ -1.23
CSTF1-201ENST00000217109 ADARB2-AS1A8MUL3 147 aa7.38□□□□□ -1.23
CSTF1-201ENST00000217109 AGRNO00468 2067 aa7.37□□□□□ -1.23
CSTF1-201ENST00000217109 TRGV2A0A075B6R0 118 aa7.37□□□□□ -1.23
CSTF1-201ENST00000217109 UBE2L6O14933 153 aa7.37□□□□□ -1.23
CSTF1-201ENST00000217109 AVPP01185 164 aa7.37□□□□□ -1.23
CSTF1-201ENST00000217109 FGF6P10767 208 aa7.37□□□□□ -1.23
CSTF1-201ENST00000217109 MEIG1Q5JSS6 88 aa7.37□□□□□ -1.23
CSTF1-201ENST00000217109 PRORYQ9H606 182 aa7.37□□□□□ -1.23
CSTF1-201ENST00000217109 ZFP2Q6ZN57 461 aa7.37□□□□□ -1.23
CSTF1-201ENST00000217109 BAALCQ8WXS3 180 aa7.37□□□□□ -1.23
CSTF1-201ENST00000217109 VPREB3Q9UKI3 123 aa7.37□□□□□ -1.23
CSTF1-201ENST00000217109 COX6CP09669 75 aa7.37□□□□□ -1.23
CSTF1-201ENST00000217109 MAPKAPK5-AS1Q8N8E1 139 aa7.37□□□□□ -1.23
CSTF1-201ENST00000217109 OPRPNQ99935 248 aaPredicted RBP7.37□□□□□ -1.23
CSTF1-201ENST00000217109 APRG1Q8IVJ8 170 aa7.36□□□□□ -1.23
CSTF1-201ENST00000217109 YAE1D1Q9NRH1 226 aa7.36□□□□□ -1.23
CSTF1-201ENST00000217109 NRACQ8N912 160 aa7.36□□□□□ -1.23
CSTF1-201ENST00000217109 ZNF415Q09FC8 603 aa7.36□□□□□ -1.23
CSTF1-201ENST00000217109 I3L3M4 83 aa7.35□□□□□ -1.23
CSTF1-201ENST00000217109 ELANEP08246 267 aa7.35□□□□□ -1.23
CSTF1-201ENST00000217109 C19orf54Q5BKX5 351 aa7.35□□□□□ -1.23
CSTF1-201ENST00000217109 SH2D6Q7Z4S9 175 aa7.35□□□□□ -1.23
CSTF1-201ENST00000217109 GPHB5Q86YW7 130 aa7.35□□□□□ -1.23
CSTF1-201ENST00000217109 ATP6V0BQ99437 205 aa7.35□□□□□ -1.23
CSTF1-201ENST00000217109 TOMM7Q9P0U1 55 aa7.35□□□□□ -1.23
CSTF1-201ENST00000217109 LGALS1P09382 135 aaKnown RBP7.35□□□□□ -1.23
CSTF1-201ENST00000217109 CIRBPQ14011 172 aaKnown RBP7.35□□□□□ -1.23
CSTF1-201ENST00000217109 TOMM6Q96B49 74 aa7.35□□□□□ -1.23
CSTF1-201ENST00000217109 ZNF625Q96I27 306 aaPredicted RBP7.35□□□□□ -1.23
CSTF1-201ENST00000217109 C11orf86A6NJI1 115 aa7.35□□□□□ -1.23
CSTF1-201ENST00000217109 IGLL5B9A064 214 aa7.35□□□□□ -1.23
CSTF1-201ENST00000217109 J3QQQ9 107 aa7.35□□□□□ -1.23
CSTF1-201ENST00000217109 DLX4Q92988 240 aaPredicted RBP7.35□□□□□ -1.23
CSTF1-201ENST00000217109 TMEM141Q96I45 108 aa7.35□□□□□ -1.23
CSTF1-201ENST00000217109 CNFNQ9BYD5 112 aa7.35□□□□□ -1.23
CSTF1-201ENST00000217109 LINC01619G3V211 115 aa7.35□□□□□ -1.23
CSTF1-201ENST00000217109 PIFOQ8TCI5 191 aa7.35□□□□□ -1.23
CSTF1-201ENST00000217109 ERG28Q9UKR5 140 aa7.35□□□□□ -1.23
CSTF1-201ENST00000217109 TEX48A0A1B0GUV7 120 aa7.34□□□□□ -1.23
CSTF1-201ENST00000217109 RPL35AP18077 110 aaKnown RBP7.34□□□□□ -1.23
CSTF1-201ENST00000217109 TRAV13-1A0A0B4J241 112 aa7.34□□□□□ -1.23
CSTF1-201ENST00000217109 K7EMT4 169 aa7.34□□□□□ -1.23
CSTF1-201ENST00000217109 WFDC2Q14508 124 aa7.34□□□□□ -1.23
CSTF1-201ENST00000217109 TIMM21Q9BVV7 248 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms