RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 F5H697 171 aa12.78□□□□□ -0.36
VRK1-201ENST00000216639 HTN1P15515 57 aa12.78□□□□□ -0.36
VRK1-201ENST00000216639 FAM110AQ9BQ89 295 aa12.78□□□□□ -0.36
VRK1-201ENST00000216639 A0A087WWL8 130 aa12.77□□□□□ -0.36
VRK1-201ENST00000216639 LINC00315P59091 139 aa12.77□□□□□ -0.36
VRK1-201ENST00000216639 KRTAP10-3P60369 221 aa12.77□□□□□ -0.36
VRK1-201ENST00000216639 ZNF415Q09FC8 603 aa12.77□□□□□ -0.36
VRK1-201ENST00000216639 ZNF876PQ49A33 203 aa12.77□□□□□ -0.36
VRK1-201ENST00000216639 LINC01587Q99440 93 aa12.77□□□□□ -0.36
VRK1-201ENST00000216639 FLNBO75369 2602 aaKnown RBP12.77□□□□□ -0.37
VRK1-201ENST00000216639 HSBP1L1C9JCN9 74 aa12.76□□□□□ -0.37
VRK1-201ENST00000216639 ORMDL2Q53FV1 153 aa12.76□□□□□ -0.37
VRK1-201ENST00000216639 TRPT1Q86TN4 253 aaKnown RBP12.76□□□□□ -0.37
VRK1-201ENST00000216639 TMEM158Q8WZ71 300 aa12.76□□□□□ -0.37
VRK1-201ENST00000216639 RPL39LQ96EH5 51 aaKnown RBP12.76□□□□□ -0.37
VRK1-201ENST00000216639 C14orf144Q96I85 54 aa12.76□□□□□ -0.37
VRK1-201ENST00000216639 JPT2Q9H910 190 aa12.76□□□□□ -0.37
VRK1-201ENST00000216639 MUC4Q99102 2169 aa12.76□□□□□ -0.37
VRK1-201ENST00000216639 FAM74A4Q5TZK3 123 aa12.76□□□□□ -0.37
VRK1-201ENST00000216639 ST20Q9HBF5 79 aa12.76□□□□□ -0.37
VRK1-201ENST00000216639 TCAPO15273 167 aa12.75□□□□□ -0.37
VRK1-201ENST00000216639 LGALS9BQ3B8N2 356 aa12.75□□□□□ -0.37
VRK1-201ENST00000216639 LGALS9CQ6DKI2 356 aa12.75□□□□□ -0.37
VRK1-201ENST00000216639 SUMO4Q6EEV6 95 aa12.75□□□□□ -0.37
VRK1-201ENST00000216639 UQCR10Q9UDW1 63 aa12.75□□□□□ -0.37
VRK1-201ENST00000216639 CUBNO60494 3623 aa12.74□□□□□ -0.37
VRK1-201ENST00000216639 ATP5LO75964 103 aa12.74□□□□□ -0.37
VRK1-201ENST00000216639 RPL32P62910 135 aaKnown RBP12.74□□□□□ -0.37
VRK1-201ENST00000216639 ZNF56Q15929 161 aa12.74□□□□□ -0.37
VRK1-201ENST00000216639 PIK3CD-AS1Q5SR53 167 aa12.74□□□□□ -0.37
VRK1-201ENST00000216639 NUDT3O95989 172 aa12.74□□□□□ -0.37
VRK1-201ENST00000216639 BEAN1Q3B7T3 259 aa12.74□□□□□ -0.37
VRK1-201ENST00000216639 MAJINQ3KP22 176 aa12.74□□□□□ -0.37
VRK1-201ENST00000216639 C18orf15Q96N68 181 aa12.74□□□□□ -0.37
VRK1-201ENST00000216639 TMEM208Q9BTX3 173 aa12.74□□□□□ -0.37
VRK1-201ENST00000216639 XCL2Q9UBD3 114 aa12.74□□□□□ -0.37
VRK1-201ENST00000216639 M0R2P5 195 aa12.73□□□□□ -0.37
VRK1-201ENST00000216639 CRYGDP07320 174 aa12.73□□□□□ -0.37
VRK1-201ENST00000216639 IGLC3P0DOY3 106 aa12.73□□□□□ -0.37
VRK1-201ENST00000216639 PTH2Q96A98 100 aa12.73□□□□□ -0.37
VRK1-201ENST00000216639 MCRIP2Q9BUT9 160 aaKnown RBP12.73□□□□□ -0.37
VRK1-201ENST00000216639 CSTL1Q9H114 145 aa12.73□□□□□ -0.37
VRK1-201ENST00000216639 SORL1Q92673 2214 aa12.72□□□□□ -0.37
VRK1-201ENST00000216639 IGLL1P15814 213 aa12.72□□□□□ -0.37
VRK1-201ENST00000216639 LINC00482Q8N8I6 264 aa12.72□□□□□ -0.37
VRK1-201ENST00000216639 SPXQ9BT56 116 aa12.72□□□□□ -0.37
VRK1-201ENST00000216639 GOLT1BQ9Y3E0 138 aa12.72□□□□□ -0.37
VRK1-201ENST00000216639 G0S2P27469 103 aa12.71□□□□□ -0.37
VRK1-201ENST00000216639 PMCHL2Q9BQD1 86 aa12.71□□□□□ -0.37
VRK1-201ENST00000216639 MTORP42345 2549 aa12.71□□□□□ -0.37
VRK1-201ENST00000216639 A8MWV9 139 aa12.71□□□□□ -0.38
VRK1-201ENST00000216639 VCYO14598 125 aa12.71□□□□□ -0.38
VRK1-201ENST00000216639 TRBV6-5A0A0K0K1A5 114 aa12.7□□□□□ -0.38
VRK1-201ENST00000216639 hDV102S1A0JD36 115 aa12.7□□□□□ -0.38
VRK1-201ENST00000216639 H7C1H1 209 aa12.7□□□□□ -0.38
VRK1-201ENST00000216639 PRSS1P07477 247 aa12.7□□□□□ -0.38
VRK1-201ENST00000216639 KIR2DL4Q99706 377 aa12.69□□□□□ -0.38
VRK1-201ENST00000216639 OTOGQ6ZRI0 2925 aa12.69□□□□□ -0.38
VRK1-201ENST00000216639 LINC01549A6NIU2 74 aa12.68□□□□□ -0.38
VRK1-201ENST00000216639 M0QY20 66 aa12.68□□□□□ -0.38
VRK1-201ENST00000216639 INSL3P51460 131 aa12.68□□□□□ -0.38
VRK1-201ENST00000216639 POLR2KP53803 58 aaKnown RBP12.68□□□□□ -0.38
VRK1-201ENST00000216639 CTAG1AP78358 180 aa12.68□□□□□ -0.38
VRK1-201ENST00000216639 LBHQ53QV2 105 aaPredicted RBP12.68□□□□□ -0.38
VRK1-201ENST00000216639 MRPL52Q86TS9 123 aaKnown RBP12.68□□□□□ -0.38
VRK1-201ENST00000216639 C11orf72Q8NBR9 251 aa12.68□□□□□ -0.38
VRK1-201ENST00000216639 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.68□□□□□ -0.38
VRK1-201ENST00000216639 Q6ZN92 141 aa12.68□□□□□ -0.38
VRK1-201ENST00000216639 C1orf158Q8N1D5 194 aa12.68□□□□□ -0.38
VRK1-201ENST00000216639 TOMM6Q96B49 74 aa12.68□□□□□ -0.38
VRK1-201ENST00000216639 C1QTNF4Q9BXJ3 329 aa12.68□□□□□ -0.38
VRK1-201ENST00000216639 SETXQ7Z333 2677 aaKnown RBP12.68□□□□□ -0.38
VRK1-201ENST00000216639 IGHV3OR16-12A0A075B7B8 117 aa12.67□□□□□ -0.38
VRK1-201ENST00000216639 SDHAF1A6NFY7 115 aa12.67□□□□□ -0.38
VRK1-201ENST00000216639 HNRNPA3P51991 378 aaKnown RBP12.67□□□□□ -0.38
VRK1-201ENST00000216639 MORN3Q6PF18 240 aaPredicted RBP12.67□□□□□ -0.38
VRK1-201ENST00000216639 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.67□□□□□ -0.38
VRK1-201ENST00000216639 C19orf73Q9NVV2 129 aa12.67□□□□□ -0.38
VRK1-201ENST00000216639 M0R143 59 aa12.66□□□□□ -0.38
VRK1-201ENST00000216639 RHODO00212 210 aa12.66□□□□□ -0.38
VRK1-201ENST00000216639 PRM2P04554 102 aa12.66□□□□□ -0.38
VRK1-201ENST00000216639 SCGB3A1Q96QR1 104 aa12.66□□□□□ -0.38
VRK1-201ENST00000216639 EDA2RQ9HAV5 297 aa12.66□□□□□ -0.38
VRK1-201ENST00000216639 NF1P21359 2839 aa12.66□□□□□ -0.38
VRK1-201ENST00000216639 TRBV27A0A0K0K1C4 114 aa12.65□□□□□ -0.38
VRK1-201ENST00000216639 C2orf66Q6UXQ4 117 aa12.65□□□□□ -0.38
VRK1-201ENST00000216639 WNK1Q9H4A3 2382 aa12.65□□□□□ -0.38
VRK1-201ENST00000216639 C9orf66Q5T8R8 295 aa12.65□□□□□ -0.38
VRK1-201ENST00000216639 NOTCH2Q04721 2471 aa12.65□□□□□ -0.39
VRK1-201ENST00000216639 ODF1Q14990 250 aa12.64□□□□□ -0.39
VRK1-201ENST00000216639 CITED1Q99966 193 aa12.64□□□□□ -0.39
VRK1-201ENST00000216639 CYSLTR1Q9Y271 337 aa12.64□□□□□ -0.39
VRK1-201ENST00000216639 RPL35AP18077 110 aaKnown RBP12.63□□□□□ -0.39
VRK1-201ENST00000216639 ZFP2Q6ZN57 461 aa12.63□□□□□ -0.39
VRK1-201ENST00000216639 NEGR1Q7Z3B1 354 aa12.63□□□□□ -0.39
VRK1-201ENST00000216639 GTSCR1Q86UQ5 136 aa12.63□□□□□ -0.39
VRK1-201ENST00000216639 TMEM263Q8WUH6 116 aaKnown RBP12.63□□□□□ -0.39
VRK1-201ENST00000216639 WFDC10AQ9H1F0 79 aa12.63□□□□□ -0.39
VRK1-201ENST00000216639 DKK2Q9UBU2 259 aa12.63□□□□□ -0.39
VRK1-201ENST00000216639 AZU1P20160 251 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms