RNA–Protein interactions for RNA: ENST00000216099.12

APOBEC3D-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

APPRIS P1 TSL 2 BASIC

Gene APOBEC3D, Length 2,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-201ENST00000216099 TMSB15BA0A087X1C1 80 aa7.97□□□□□ -1.13
APOBEC3D-201ENST00000216099 AP1S3Q96PC3 154 aa7.97□□□□□ -1.13
APOBEC3D-201ENST00000216099 RHPN1-AS1Q9BWJ2 59 aa7.97□□□□□ -1.13
APOBEC3D-201ENST00000216099 EPG5Q9HCE0 2579 aa7.97□□□□□ -1.13
APOBEC3D-201ENST00000216099 FAM104BQ5XKR9 115 aa7.97□□□□□ -1.13
APOBEC3D-201ENST00000216099 SCRT2Q9NQ03 307 aa7.97□□□□□ -1.13
APOBEC3D-201ENST00000216099 USP9YO00507 2555 aaPredicted RBP7.97□□□□□ -1.13
APOBEC3D-201ENST00000216099 SEC11AP67812 179 aa7.96□□□□□ -1.13
APOBEC3D-201ENST00000216099 OR10J6PQ8NGY7 276 aa7.96□□□□□ -1.13
APOBEC3D-201ENST00000216099 DNAJC30Q96LL9 226 aa7.96□□□□□ -1.13
APOBEC3D-201ENST00000216099 TMEM191AQ9H0A3 160 aa7.96□□□□□ -1.13
APOBEC3D-201ENST00000216099 SYS1-DBNDD2H3BUS1 97 aa7.96□□□□□ -1.14
APOBEC3D-201ENST00000216099 LGALS1P09382 135 aaKnown RBP7.96□□□□□ -1.14
APOBEC3D-201ENST00000216099 LEPP41159 167 aa7.96□□□□□ -1.14
APOBEC3D-201ENST00000216099 C4orf26Q17RF5 130 aa7.96□□□□□ -1.14
APOBEC3D-201ENST00000216099 TMEM86BQ8N661 226 aa7.96□□□□□ -1.14
APOBEC3D-201ENST00000216099 PTPN13Q12923 2485 aa7.96□□□□□ -1.14
APOBEC3D-201ENST00000216099 LGALS9O00182 355 aa7.95□□□□□ -1.14
APOBEC3D-201ENST00000216099 OR5AL1P0C617 328 aa7.95□□□□□ -1.14
APOBEC3D-201ENST00000216099 PLA2G2AP14555 144 aa7.95□□□□□ -1.14
APOBEC3D-201ENST00000216099 FAM19A4Q96LR4 140 aa7.95□□□□□ -1.14
APOBEC3D-201ENST00000216099 UBE2E2Q96LR5 201 aa7.95□□□□□ -1.14
APOBEC3D-201ENST00000216099 OVOL2Q9BRP0 275 aa7.95□□□□□ -1.14
APOBEC3D-201ENST00000216099 TINCRA0A1B0GVN0 87 aa7.95□□□□□ -1.14
APOBEC3D-201ENST00000216099 K7EP34 96 aa7.95□□□□□ -1.14
APOBEC3D-201ENST00000216099 MS4A6AQ9H2W1 248 aa7.95□□□□□ -1.14
APOBEC3D-201ENST00000216099 KMT2BQ9UMN6 2715 aaPredicted RBP7.95□□□□□ -1.14
APOBEC3D-201ENST00000216099 IGKV3D-20A0A0C4DH25 116 aa7.94□□□□□ -1.14
APOBEC3D-201ENST00000216099 C9orf118A6NHY6 69 aa7.94□□□□□ -1.14
APOBEC3D-201ENST00000216099 HOXD3P31249 432 aaPredicted RBP7.94□□□□□ -1.14
APOBEC3D-201ENST00000216099 C11orf21Q9P2W6 132 aa7.94□□□□□ -1.14
APOBEC3D-201ENST00000216099 POLQO75417 2590 aa7.94□□□□□ -1.14
APOBEC3D-201ENST00000216099 CELSR1Q9NYQ6 3014 aa7.94□□□□□ -1.14
APOBEC3D-201ENST00000216099 IGHV1-24A0A0C4DH33 117 aa7.94□□□□□ -1.14
APOBEC3D-201ENST00000216099 J3QKU1 62 aa7.94□□□□□ -1.14
APOBEC3D-201ENST00000216099 TWIST1Q15672 202 aa7.94□□□□□ -1.14
APOBEC3D-201ENST00000216099 C10orf99Q6UWK7 81 aa7.94□□□□□ -1.14
APOBEC3D-201ENST00000216099 ORMDL3Q8N138 153 aa7.94□□□□□ -1.14
APOBEC3D-201ENST00000216099 ZFAND2AQ8N6M9 145 aa7.94□□□□□ -1.14
APOBEC3D-201ENST00000216099 OR8A1Q8NGG7 326 aa7.94□□□□□ -1.14
APOBEC3D-201ENST00000216099 IGHV4-4A0A075B6R2 117 aa7.93□□□□□ -1.14
APOBEC3D-201ENST00000216099 GAGE12JA6NER3 117 aa7.93□□□□□ -1.14
APOBEC3D-201ENST00000216099 H3BRM9 83 aa7.93□□□□□ -1.14
APOBEC3D-201ENST00000216099 GAGE7O76087 117 aa7.93□□□□□ -1.14
APOBEC3D-201ENST00000216099 LEPROTL1O95214 131 aa7.93□□□□□ -1.14
APOBEC3D-201ENST00000216099 NHLRC4P0CG21 123 aaPredicted RBP7.93□□□□□ -1.14
APOBEC3D-201ENST00000216099 GAGE12FP0CL80 117 aa7.93□□□□□ -1.14
APOBEC3D-201ENST00000216099 GAGE12GP0CL81 117 aa7.93□□□□□ -1.14
APOBEC3D-201ENST00000216099 GAGE12IP0CL82 117 aa7.93□□□□□ -1.14
APOBEC3D-201ENST00000216099 GAGE4Q13068 117 aa7.93□□□□□ -1.14
APOBEC3D-201ENST00000216099 MRPL51Q4U2R6 128 aaKnown RBP7.93□□□□□ -1.14
APOBEC3D-201ENST00000216099 TMEM97Q5BJF2 176 aa7.93□□□□□ -1.14
APOBEC3D-201ENST00000216099 Q9UF83 564 aa7.93□□□□□ -1.14
APOBEC3D-201ENST00000216099 A6NDN8 102 aa7.93□□□□□ -1.14
APOBEC3D-201ENST00000216099 CACNG7P62955 275 aa7.93□□□□□ -1.14
APOBEC3D-201ENST00000216099 AMN1Q8IY45 258 aa7.93□□□□□ -1.14
APOBEC3D-201ENST00000216099 OR2K2Q8NGT1 345 aa7.93□□□□□ -1.14
APOBEC3D-201ENST00000216099 PRELID3AQ96N28 172 aa7.93□□□□□ -1.14
APOBEC3D-201ENST00000216099 PMCHL2Q9BQD1 86 aa7.93□□□□□ -1.14
APOBEC3D-201ENST00000216099 SELENOKQ9Y6D0 94 aa7.93□□□□□ -1.14
APOBEC3D-201ENST00000216099 NAV2Q8IVL1 2488 aa7.93□□□□□ -1.14
APOBEC3D-201ENST00000216099 CSMD1Q96PZ7 3565 aa7.92□□□□□ -1.14
APOBEC3D-201ENST00000216099 VPS13CQ709C8 3753 aa7.92□□□□□ -1.14
APOBEC3D-201ENST00000216099 TRAV21A0A0B4J279 112 aa7.92□□□□□ -1.14
APOBEC3D-201ENST00000216099 TEX48A0A1B0GUV7 120 aa7.92□□□□□ -1.14
APOBEC3D-201ENST00000216099 H3BUT2 72 aa7.92□□□□□ -1.14
APOBEC3D-201ENST00000216099 TCTAP57738 103 aa7.92□□□□□ -1.14
APOBEC3D-201ENST00000216099 LINC00173Q6ZV60 143 aa7.92□□□□□ -1.14
APOBEC3D-201ENST00000216099 DCANP1Q8TF63 244 aa7.92□□□□□ -1.14
APOBEC3D-201ENST00000216099 CENPEQ02224 2701 aa7.92□□□□□ -1.14
APOBEC3D-201ENST00000216099 APCP25054 2843 aa7.92□□□□□ -1.14
APOBEC3D-201ENST00000216099 D6R8Y8 96 aa7.92□□□□□ -1.14
APOBEC3D-201ENST00000216099 MED14OSP0DP75 135 aa7.92□□□□□ -1.14
APOBEC3D-201ENST00000216099 COX8AP10176 69 aa7.92□□□□□ -1.14
APOBEC3D-201ENST00000216099 PRR9Q5T870 116 aa7.92□□□□□ -1.14
APOBEC3D-201ENST00000216099 C2orf91Q6ZV80 131 aa7.92□□□□□ -1.14
APOBEC3D-201ENST00000216099 OR5A1Q8NGJ0 315 aa7.92□□□□□ -1.14
APOBEC3D-201ENST00000216099 OR10AG1Q8NH19 301 aa7.92□□□□□ -1.14
APOBEC3D-201ENST00000216099 GATA1P15976 413 aaPredicted RBP7.91□□□□□ -1.14
APOBEC3D-201ENST00000216099 FOXI2Q6ZQN5 318 aa7.91□□□□□ -1.14
APOBEC3D-201ENST00000216099 RNF185Q96GF1 192 aa7.91□□□□□ -1.14
APOBEC3D-201ENST00000216099 ODF3Q96PU9 254 aa7.91□□□□□ -1.14
APOBEC3D-201ENST00000216099 ABCA12Q86UK0 2595 aa7.91□□□□□ -1.14
APOBEC3D-201ENST00000216099 CREBBPQ92793 2442 aa7.91□□□□□ -1.14
APOBEC3D-201ENST00000216099 FAM19A5Q7Z5A7 132 aaPredicted RBP7.91□□□□□ -1.14
APOBEC3D-201ENST00000216099 MAP1AP78559 2803 aaPredicted RBP7.91□□□□□ -1.14
APOBEC3D-201ENST00000216099 IGHV4OR15-8A0A075B7B6 117 aa7.9□□□□□ -1.14
APOBEC3D-201ENST00000216099 A0A087WW49 117 aa7.9□□□□□ -1.14
APOBEC3D-201ENST00000216099 WFDC11Q8NEX6 87 aa7.9□□□□□ -1.14
APOBEC3D-201ENST00000216099 PRSS3P2Q8NHM4 247 aa7.9□□□□□ -1.14
APOBEC3D-201ENST00000216099 DUX3Q96PT4 197 aa7.9□□□□□ -1.14
APOBEC3D-201ENST00000216099 ZANQ9Y493 2812 aa7.9□□□□□ -1.14
APOBEC3D-201ENST00000216099 DOPEY2Q9Y3R5 2298 aa7.9□□□□□ -1.15
APOBEC3D-201ENST00000216099 LINC01546A6NGU7 62 aa7.9□□□□□ -1.15
APOBEC3D-201ENST00000216099 CCDC179H3BU77 68 aa7.9□□□□□ -1.15
APOBEC3D-201ENST00000216099 CKS2P33552 79 aa7.9□□□□□ -1.15
APOBEC3D-201ENST00000216099 RPL24P83731 157 aaKnown RBP7.9□□□□□ -1.15
APOBEC3D-201ENST00000216099 OR13C6PQ8NH95 151 aa7.9□□□□□ -1.15
APOBEC3D-201ENST00000216099 K7EQG2 157 aa7.89□□□□□ -1.15
APOBEC3D-201ENST00000216099 SPINK8P0C7L1 97 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms