RNA–Protein interactions for RNA: ENST00000200652.3

SLC22A4-201, Transcript of solute carrier family 22 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC22A4, Length 2,201 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC22A4-201ENST00000200652 TMEM61Q8N0U2 210 aa13.36□□□□□ -0.27
SLC22A4-201ENST00000200652 TRAV2A0A0B4J234 112 aa13.36□□□□□ -0.27
SLC22A4-201ENST00000200652 F5H697 171 aa13.36□□□□□ -0.27
SLC22A4-201ENST00000200652 TAX1BP3O14907 124 aa13.36□□□□□ -0.27
SLC22A4-201ENST00000200652 RPL32P62910 135 aaKnown RBP13.36□□□□□ -0.27
SLC22A4-201ENST00000200652 ZC2HC1BQ5TFG8 222 aa13.36□□□□□ -0.27
SLC22A4-201ENST00000200652 C2orf66Q6UXQ4 117 aa13.36□□□□□ -0.27
SLC22A4-201ENST00000200652 NEGR1Q7Z3B1 354 aa13.36□□□□□ -0.27
SLC22A4-201ENST00000200652 GTSCR1Q86UQ5 136 aa13.36□□□□□ -0.27
SLC22A4-201ENST00000200652 SYT8Q8NBV8 401 aa13.36□□□□□ -0.27
SLC22A4-201ENST00000200652 TRAV12-1A0A0B4J245 112 aa13.35□□□□□ -0.27
SLC22A4-201ENST00000200652 RBMY1A1P0DJD3 496 aaKnown RBP13.35□□□□□ -0.27
SLC22A4-201ENST00000200652 RBMY1CP0DJD4 496 aa13.35□□□□□ -0.27
SLC22A4-201ENST00000200652 POLR2KP53803 58 aaKnown RBP13.35□□□□□ -0.27
SLC22A4-201ENST00000200652 RBMY1FQ15415 496 aaKnown RBP13.35□□□□□ -0.27
SLC22A4-201ENST00000200652 A8MTW9 85 aa13.35□□□□□ -0.27
SLC22A4-201ENST00000200652 HLA-DRB4P13762 266 aa13.35□□□□□ -0.27
SLC22A4-201ENST00000200652 HLA-DRB4X5D2U9 266 aa13.35□□□□□ -0.27
SLC22A4-201ENST00000200652 TENM4Q6N022 2769 aa13.34□□□□□ -0.27
SLC22A4-201ENST00000200652 H3BMM0 161 aa13.34□□□□□ -0.27
SLC22A4-201ENST00000200652 ZNF124Q15973 351 aa13.34□□□□□ -0.27
SLC22A4-201ENST00000200652 FAM74A4Q5TZK3 123 aa13.34□□□□□ -0.27
SLC22A4-201ENST00000200652 ESM1Q9NQ30 184 aa13.34□□□□□ -0.27
SLC22A4-201ENST00000200652 TLN2Q9Y4G6 2542 aa13.34□□□□□ -0.27
SLC22A4-201ENST00000200652 CRYGDP07320 174 aa13.33□□□□□ -0.27
SLC22A4-201ENST00000200652 NEXN-AS1Q8NBZ9 246 aa13.33□□□□□ -0.27
SLC22A4-201ENST00000200652 H7C1H1 209 aa13.33□□□□□ -0.28
SLC22A4-201ENST00000200652 TRGV11A0A075B6L2 103 aa13.32□□□□□ -0.28
SLC22A4-201ENST00000200652 RBMY1BA6NDE4 496 aaKnown RBP13.32□□□□□ -0.28
SLC22A4-201ENST00000200652 RBMY1EA6NEQ0 496 aaKnown RBP13.32□□□□□ -0.28
SLC22A4-201ENST00000200652 RBMY1DP0C7P1 496 aaKnown RBP13.32□□□□□ -0.28
SLC22A4-201ENST00000200652 PLA2G2AP14555 144 aa13.32□□□□□ -0.28
SLC22A4-201ENST00000200652 KRTAP1-1Q07627 177 aa13.32□□□□□ -0.28
SLC22A4-201ENST00000200652 DEFB114Q30KQ6 69 aa13.32□□□□□ -0.28
SLC22A4-201ENST00000200652 DYNLRB2Q8TF09 96 aa13.32□□□□□ -0.28
SLC22A4-201ENST00000200652 TTTY13Q9BZ97 58 aa13.32□□□□□ -0.28
SLC22A4-201ENST00000200652 F8VRH5 84 aa13.32□□□□□ -0.28
SLC22A4-201ENST00000200652 PLNP26678 52 aa13.32□□□□□ -0.28
SLC22A4-201ENST00000200652 CBY3A6NI87 242 aa13.31□□□□□ -0.28
SLC22A4-201ENST00000200652 VCYO14598 125 aa13.31□□□□□ -0.28
SLC22A4-201ENST00000200652 SEC11AP67812 179 aa13.31□□□□□ -0.28
SLC22A4-201ENST00000200652 HSD52Q0P140 79 aa13.31□□□□□ -0.28
SLC22A4-201ENST00000200652 ERASQ7Z444 233 aa13.31□□□□□ -0.28
SLC22A4-201ENST00000200652 BAALCQ8WXS3 180 aa13.31□□□□□ -0.28
SLC22A4-201ENST00000200652 CHTOPQ9Y3Y2 248 aaKnown RBP13.31□□□□□ -0.28
SLC22A4-201ENST00000200652 MYO9AB2RTY4 2548 aa13.31□□□□□ -0.28
SLC22A4-201ENST00000200652 AKAP9Q99996 3911 aa13.31□□□□□ -0.28
SLC22A4-201ENST00000200652 TRBV6-5A0A0K0K1A5 114 aa13.31□□□□□ -0.28
SLC22A4-201ENST00000200652 SDHAF1A6NFY7 115 aa13.31□□□□□ -0.28
SLC22A4-201ENST00000200652 ZNF56Q15929 161 aa13.31□□□□□ -0.28
SLC22A4-201ENST00000200652 ZNF876PQ49A33 203 aa13.31□□□□□ -0.28
SLC22A4-201ENST00000200652 ZFP2Q6ZN57 461 aa13.31□□□□□ -0.28
SLC22A4-201ENST00000200652 MAP6D1Q9H9H5 199 aa13.31□□□□□ -0.28
SLC22A4-201ENST00000200652 J3QKU1 62 aa13.3□□□□□ -0.28
SLC22A4-201ENST00000200652 M0QY20 66 aa13.3□□□□□ -0.28
SLC22A4-201ENST00000200652 MORN3Q6PF18 240 aaPredicted RBP13.3□□□□□ -0.28
SLC22A4-201ENST00000200652 DEFB104AQ8WTQ1 72 aa13.3□□□□□ -0.28
SLC22A4-201ENST00000200652 RAX2Q96IS3 184 aa13.3□□□□□ -0.28
SLC22A4-201ENST00000200652 SONP18583 2426 aaKnown RBP13.3□□□□□ -0.28
SLC22A4-201ENST00000200652 CD300EQ496F6 205 aaPredicted RBP13.29□□□□□ -0.28
SLC22A4-201ENST00000200652 C11orf44Q8N8P7 122 aa13.29□□□□□ -0.28
SLC22A4-201ENST00000200652 TRBV27A0A0K0K1C4 114 aa13.29□□□□□ -0.28
SLC22A4-201ENST00000200652 CCL25O15444 150 aa13.29□□□□□ -0.28
SLC22A4-201ENST00000200652 KIR2DL4Q99706 377 aa13.29□□□□□ -0.28
SLC22A4-201ENST00000200652 CYSLTR1Q9Y271 337 aa13.29□□□□□ -0.28
SLC22A4-201ENST00000200652 HTN1P15515 57 aa13.28□□□□□ -0.28
SLC22A4-201ENST00000200652 UBE2V1Q13404 147 aa13.28□□□□□ -0.28
SLC22A4-201ENST00000200652 PDZD2O15018 2839 aa13.28□□□□□ -0.28
SLC22A4-201ENST00000200652 FLNAP21333 2647 aaKnown RBP13.28□□□□□ -0.28
SLC22A4-201ENST00000200652 PTTG1IPP53801 180 aa13.28□□□□□ -0.28
SLC22A4-201ENST00000200652 YAE1D1Q9NRH1 226 aa13.28□□□□□ -0.28
SLC22A4-201ENST00000200652 HIGD1BQ9P298 99 aa13.28□□□□□ -0.28
SLC22A4-201ENST00000200652 TP53TG1Q9Y2A0 90 aa13.28□□□□□ -0.28
SLC22A4-201ENST00000200652 ZNF256Q9Y2P7 627 aaPredicted RBP13.28□□□□□ -0.28
SLC22A4-201ENST00000200652 PRSS29PA6NIE9 313 aa13.27□□□□□ -0.28
SLC22A4-201ENST00000200652 CD28P10747 220 aa13.27□□□□□ -0.28
SLC22A4-201ENST00000200652 A0A1W2PRX2 142 aa13.27□□□□□ -0.29
SLC22A4-201ENST00000200652 CCDC168Q8NDH2 2452 aa13.26□□□□□ -0.29
SLC22A4-201ENST00000200652 IGIPA6NJ69 53 aa13.26□□□□□ -0.29
SLC22A4-201ENST00000200652 TSHBP01222 138 aa13.26□□□□□ -0.29
SLC22A4-201ENST00000200652 FHL3Q13643 280 aa13.26□□□□□ -0.29
SLC22A4-201ENST00000200652 TRPT1Q86TN4 253 aaKnown RBP13.26□□□□□ -0.29
SLC22A4-201ENST00000200652 MAPKAPK5-AS1Q8N8E1 139 aa13.26□□□□□ -0.29
SLC22A4-201ENST00000200652 SPAG8Q99932 426 aaPredicted RBP13.26□□□□□ -0.29
SLC22A4-201ENST00000200652 TRBV25-1A0A075B6N4 114 aa13.25□□□□□ -0.29
SLC22A4-201ENST00000200652 LINC01549A6NIU2 74 aa13.25□□□□□ -0.29
SLC22A4-201ENST00000200652 PRM2P04554 102 aa13.25□□□□□ -0.29
SLC22A4-201ENST00000200652 RIPPLY3P57055 190 aa13.25□□□□□ -0.29
SLC22A4-201ENST00000200652 RPL39P62891 51 aaKnown RBP13.25□□□□□ -0.29
SLC22A4-201ENST00000200652 VAMP3Q15836 100 aa13.25□□□□□ -0.29
SLC22A4-201ENST00000200652 CHD6Q8TD26 2715 aa13.25□□□□□ -0.29
SLC22A4-201ENST00000200652 TRAV8-6A0A0B4J262 113 aa13.24□□□□□ -0.29
SLC22A4-201ENST00000200652 A6NDN8 102 aa13.24□□□□□ -0.29
SLC22A4-201ENST00000200652 CCL24O00175 119 aa13.24□□□□□ -0.29
SLC22A4-201ENST00000200652 CHAC1Q9BUX1 264 aa13.24□□□□□ -0.29
SLC22A4-201ENST00000200652 JMJD8Q96S16 334 aa13.23□□□□□ -0.29
SLC22A4-201ENST00000200652 TRAV25A0A0B4J276 109 aa13.23□□□□□ -0.29
SLC22A4-201ENST00000200652 CITED2Q99967 270 aaPredicted RBP13.23□□□□□ -0.29
SLC22A4-201ENST00000200652 CUBNO60494 3623 aa13.22□□□□□ -0.29
SLC22A4-201ENST00000200652 LINC01006Q8NI28 216 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms