RNA–Protein interactions for RNA: ENST00000194530.7

STRADB-201, Transcript of STE20-related kinase adaptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene STRADB, Length 2,293 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADB-201ENST00000194530 IGKV3-20P01619 116 aa15.43■□□□□ 0.06
STRADB-201ENST00000194530 TIMM17AQ99595 171 aa15.43■□□□□ 0.06
STRADB-201ENST00000194530 MDFICQ9P1T7 246 aa15.43■□□□□ 0.06
STRADB-201ENST00000194530 TRAV12-2A0A075B6T6 113 aa15.43■□□□□ 0.06
STRADB-201ENST00000194530 RIPPLY3P57055 190 aa15.43■□□□□ 0.06
STRADB-201ENST00000194530 FOXI2Q6ZQN5 318 aa15.43■□□□□ 0.06
STRADB-201ENST00000194530 VPS13CQ709C8 3753 aa15.43■□□□□ 0.06
STRADB-201ENST00000194530 IGHV1OR15-1A0A075B7D0 117 aa15.42■□□□□ 0.06
STRADB-201ENST00000194530 ZNF815PA8K554 130 aa15.42■□□□□ 0.06
STRADB-201ENST00000194530 SYNJ2BPP57105 145 aa15.42■□□□□ 0.06
STRADB-201ENST00000194530 HERVK_113P61574 105 aa15.42■□□□□ 0.06
STRADB-201ENST00000194530 Q8N1Y9 231 aa15.42■□□□□ 0.06
STRADB-201ENST00000194530 IGLV4-69A0A075B6H9 119 aa15.41■□□□□ 0.06
STRADB-201ENST00000194530 TGFAP01135 160 aa15.41■□□□□ 0.06
STRADB-201ENST00000194530 ELANEP08246 267 aa15.41■□□□□ 0.06
STRADB-201ENST00000194530 FAM74A4Q5TZK3 123 aa15.41■□□□□ 0.06
STRADB-201ENST00000194530 C11orf86A6NJI1 115 aa15.41■□□□□ 0.06
STRADB-201ENST00000194530 COX6B1P14854 86 aa15.41■□□□□ 0.06
STRADB-201ENST00000194530 RPL39P62891 51 aaKnown RBP15.41■□□□□ 0.06
STRADB-201ENST00000194530 A0A096LNT2 108 aa15.4■□□□□ 0.06
STRADB-201ENST00000194530 CD300EQ496F6 205 aaPredicted RBP15.4■□□□□ 0.06
STRADB-201ENST00000194530 SPINK13Q1W4C9 94 aa15.4■□□□□ 0.06
STRADB-201ENST00000194530 RRN3P1Q2M238 152 aa15.4■□□□□ 0.06
STRADB-201ENST00000194530 SCGB1D4Q6XE38 83 aa15.4■□□□□ 0.06
STRADB-201ENST00000194530 VPREB3Q9UKI3 123 aa15.4■□□□□ 0.06
STRADB-201ENST00000194530 M0QY20 66 aa15.39■□□□□ 0.05
STRADB-201ENST00000194530 ZNF56Q15929 161 aa15.39■□□□□ 0.05
STRADB-201ENST00000194530 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.39■□□□□ 0.056e-7■□□□□ 10.3
STRADB-201ENST00000194530 AGRNO00468 2067 aa15.39■□□□□ 0.05
STRADB-201ENST00000194530 HOXA3O43365 443 aaPredicted RBP15.38■□□□□ 0.05
STRADB-201ENST00000194530 RNF152Q8N8N0 203 aa15.38■□□□□ 0.05
STRADB-201ENST00000194530 DEFB104AQ8WTQ1 72 aa15.38■□□□□ 0.05
STRADB-201ENST00000194530 TRPT1Q86TN4 253 aaKnown RBP15.38■□□□□ 0.05
STRADB-201ENST00000194530 UBE2E2Q96LR5 201 aa15.38■□□□□ 0.05
STRADB-201ENST00000194530 TMEM238LA0A1B0GVL6 79 aa15.37■□□□□ 0.05
STRADB-201ENST00000194530 A6NJY4 79 aa15.37■□□□□ 0.05
STRADB-201ENST00000194530 F8W1H4 67 aa15.37■□□□□ 0.05
STRADB-201ENST00000194530 ZNF256Q9Y2P7 627 aaPredicted RBP15.37■□□□□ 0.05
STRADB-201ENST00000194530 HOXD3P31249 432 aaPredicted RBP15.37■□□□□ 0.05
STRADB-201ENST00000194530 RHOHQ15669 191 aa15.37■□□□□ 0.05
STRADB-201ENST00000194530 MORN3Q6PF18 240 aaPredicted RBP15.37■□□□□ 0.05
STRADB-201ENST00000194530 PKD1L2Q7Z442 2459 aa15.37■□□□□ 0.05
STRADB-201ENST00000194530 SRSF9Q13242 221 aaKnown RBP eCLIP15.36■□□□□ 0.05
STRADB-201ENST00000194530 KLHL30-AS1Q8NEE0 82 aa15.36■□□□□ 0.05
STRADB-201ENST00000194530 PLEKHB2Q96CS7 222 aa15.36■□□□□ 0.05
STRADB-201ENST00000194530 SPG11Q96JI7 2443 aa15.36■□□□□ 0.05
STRADB-201ENST00000194530 EMP1P54849 157 aa15.36■□□□□ 0.05
STRADB-201ENST00000194530 RPL24P83731 157 aaKnown RBP15.36■□□□□ 0.05
STRADB-201ENST00000194530 COTL1Q14019 142 aa15.36■□□□□ 0.05
STRADB-201ENST00000194530 ZNF876PQ49A33 203 aa15.36■□□□□ 0.05
STRADB-201ENST00000194530 Q6YL49 198 aa15.36■□□□□ 0.05
STRADB-201ENST00000194530 ZNF702PQ9H963 129 aa15.36■□□□□ 0.05
STRADB-201ENST00000194530 TRGV11A0A075B6L2 103 aa15.35■□□□□ 0.05
STRADB-201ENST00000194530 NSUN5P1Q3KNT7 163 aa15.35■□□□□ 0.05
STRADB-201ENST00000194530 DUX5Q96PT3 197 aa15.35■□□□□ 0.05
STRADB-201ENST00000194530 COL12A1Q99715 3063 aa15.35■□□□□ 0.05
STRADB-201ENST00000194530 AMTNQ6UX39 209 aa15.34■□□□□ 0.05
STRADB-201ENST00000194530 DOPEY1Q5JWR5 2465 aa15.34■□□□□ 0.05
STRADB-201ENST00000194530 MAPK1IP1LQ8NDC0 245 aa15.34■□□□□ 0.05
STRADB-201ENST00000194530 TMEM170BQ5T4T1 132 aa15.33■□□□□ 0.05
STRADB-201ENST00000194530 FSHBP01225 129 aa15.33■□□□□ 0.04
STRADB-201ENST00000194530 CSPG4Q6UVK1 2322 aa15.33■□□□□ 0.04
STRADB-201ENST00000194530 H3BMG7 143 aa15.32■□□□□ 0.04
STRADB-201ENST00000194530 TCTEX1D4Q5JR98 221 aa15.32■□□□□ 0.04
STRADB-201ENST00000194530 ZNRF2Q8NHG8 242 aa15.32■□□□□ 0.04
STRADB-201ENST00000194530 TEX48A0A1B0GUV7 120 aa15.31■□□□□ 0.04
STRADB-201ENST00000194530 I3L3M4 83 aa15.31■□□□□ 0.04
STRADB-201ENST00000194530 A0A0J9YY99 117 aa15.31■□□□□ 0.04
STRADB-201ENST00000194530 UBE2D1P51668 147 aa15.31■□□□□ 0.04
STRADB-201ENST00000194530 NFE4Q86UQ8 179 aa15.31■□□□□ 0.04
STRADB-201ENST00000194530 WFDC2Q14508 124 aa15.3■□□□□ 0.04
STRADB-201ENST00000194530 PGPEP1Q9NXJ5 209 aa15.3■□□□□ 0.04
STRADB-201ENST00000194530 P0DMU3 169 aa15.29■□□□□ 0.04
STRADB-201ENST00000194530 FAM231AP0DMU4 169 aa15.29■□□□□ 0.04
STRADB-201ENST00000194530 FAM231CP0DMU5 169 aa15.29■□□□□ 0.04
STRADB-201ENST00000194530 C20orf203Q8NBC4 194 aa15.29■□□□□ 0.04
STRADB-201ENST00000194530 GAGE13Q4V321 117 aa15.29■□□□□ 0.04
STRADB-201ENST00000194530 SPANXB1Q9NS25 103 aaPredicted RBP15.29■□□□□ 0.04
STRADB-201ENST00000194530 MRPL16Q9NX20 251 aaKnown RBP15.29■□□□□ 0.04
STRADB-201ENST00000194530 BEX4Q9NWD9 120 aaPredicted RBP15.28■□□□□ 0.04
STRADB-201ENST00000194530 IGHV4-31P0DP07 118 aa15.28■□□□□ 0.04
STRADB-201ENST00000194530 CFAP46Q8IYW2 2715 aa15.27■□□□□ 0.03
STRADB-201ENST00000194530 KNCNA6PVL3 124 aa15.27■□□□□ 0.03
STRADB-201ENST00000194530 J3QQQ9 107 aa15.27■□□□□ 0.03
STRADB-201ENST00000194530 TSPEAR-AS2P59090 65 aa15.27■□□□□ 0.03
STRADB-201ENST00000194530 SLC25A29Q8N8R3 303 aa15.27■□□□□ 0.03
STRADB-201ENST00000194530 EDA2RQ9HAV5 297 aa15.27■□□□□ 0.03
STRADB-201ENST00000194530 LGALS3P17931 250 aaKnown RBP15.26■□□□□ 0.03
STRADB-201ENST00000194530 OPRPNQ99935 248 aaPredicted RBP15.26■□□□□ 0.03
STRADB-201ENST00000194530 A8MTW9 85 aa15.26■□□□□ 0.03
STRADB-201ENST00000194530 RBMY1A1P0DJD3 496 aaKnown RBP15.26■□□□□ 0.03
STRADB-201ENST00000194530 RBMY1CP0DJD4 496 aa15.26■□□□□ 0.03
STRADB-201ENST00000194530 SLURP1P55000 103 aa15.26■□□□□ 0.03
STRADB-201ENST00000194530 DEFB131AP59861 70 aa15.26■□□□□ 0.03
STRADB-201ENST00000194530 RBMY1FQ15415 496 aaKnown RBP15.26■□□□□ 0.03
STRADB-201ENST00000194530 CELSR2Q9HCU4 2923 aa15.25■□□□□ 0.03
STRADB-201ENST00000194530 PRO0461Q9UI25 63 aa15.25■□□□□ 0.03
STRADB-201ENST00000194530 TRAV2A0A0B4J234 112 aa15.24■□□□□ 0.03
STRADB-201ENST00000194530 LEPROTO15243 131 aa15.24■□□□□ 0.03
STRADB-201ENST00000194530 TMEM223A0PJW6 202 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms