RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 CGB7P0DN87 165 aa9.49□□□□□ -0.89
TSPAN9-201ENST00000011898 LINC00310P59036 64 aa9.49□□□□□ -0.89
TSPAN9-201ENST00000011898 LOXL1Q08397 574 aaPredicted RBP9.49□□□□□ -0.89
TSPAN9-201ENST00000011898 HCFC1P51610 2035 aa9.48□□□□□ -0.89
TSPAN9-201ENST00000011898 SHISA9B4DS77 424 aa9.48□□□□□ -0.89
TSPAN9-201ENST00000011898 H3BUX3 64 aa9.48□□□□□ -0.89
TSPAN9-201ENST00000011898 IGKV1-17P01599 117 aa9.48□□□□□ -0.89
TSPAN9-201ENST00000011898 HAMPP81172 84 aa9.48□□□□□ -0.89
TSPAN9-201ENST00000011898 GDF5OSQ5U4N7 250 aa9.48□□□□□ -0.89
TSPAN9-201ENST00000011898 SMIM2Q9BVW6 85 aa9.48□□□□□ -0.89
TSPAN9-201ENST00000011898 NACAE9PAV3 2078 aa9.48□□□□□ -0.89
TSPAN9-201ENST00000011898 PF4P02776 101 aa9.48□□□□□ -0.89
TSPAN9-201ENST00000011898 HERVK_113P63121 156 aa9.48□□□□□ -0.89
TSPAN9-201ENST00000011898 PRIMA1Q86XR5 153 aa9.48□□□□□ -0.89
TSPAN9-201ENST00000011898 LAMTOR3Q9UHA4 124 aa9.48□□□□□ -0.89
TSPAN9-201ENST00000011898 A0A087WWL8 130 aa9.47□□□□□ -0.89
TSPAN9-201ENST00000011898 Q8N1Y9 231 aa9.47□□□□□ -0.89
TSPAN9-201ENST00000011898 TMEM258P61165 79 aa9.47□□□□□ -0.89
TSPAN9-201ENST00000011898 C2orf91Q6ZV80 131 aa9.47□□□□□ -0.89
TSPAN9-201ENST00000011898 IGFBPL1Q8WX77 278 aa9.47□□□□□ -0.89
TSPAN9-201ENST00000011898 IGF2BP2-AS1Q96M15 143 aa9.47□□□□□ -0.89
TSPAN9-201ENST00000011898 LINC00477Q96M19 166 aa9.47□□□□□ -0.89
TSPAN9-201ENST00000011898 TCL1BO95988 128 aa9.47□□□□□ -0.89
TSPAN9-201ENST00000011898 A0A1W2PRX2 142 aa9.47□□□□□ -0.89
TSPAN9-201ENST00000011898 GP9P14770 177 aa9.47□□□□□ -0.89
TSPAN9-201ENST00000011898 GRNP28799 593 aaKnown RBP9.46□□□□□ -0.89
TSPAN9-201ENST00000011898 UBE2E1P51965 193 aa9.46□□□□□ -0.89
TSPAN9-201ENST00000011898 EIF4EBP1Q13541 118 aaPredicted RBP9.46□□□□□ -0.89
TSPAN9-201ENST00000011898 C1orf229Q6ZS94 237 aaPredicted RBP9.46□□□□□ -0.89
TSPAN9-201ENST00000011898 ZNF503Q96F45 646 aa9.46□□□□□ -0.89
TSPAN9-201ENST00000011898 TRAV4A0A0B4J268 109 aa9.46□□□□□ -0.9
TSPAN9-201ENST00000011898 RNF223E7ERA6 249 aa9.46□□□□□ -0.9
TSPAN9-201ENST00000011898 ACYP1P07311 99 aa9.46□□□□□ -0.9
TSPAN9-201ENST00000011898 NDUFA12Q9UI09 145 aa9.46□□□□□ -0.9
TSPAN9-201ENST00000011898 NDUFC2O95298 119 aa9.46□□□□□ -0.9
TSPAN9-201ENST00000011898 ODF1Q14990 250 aa9.46□□□□□ -0.9
TSPAN9-201ENST00000011898 UFSP1Q6NVU6 142 aa9.46□□□□□ -0.9
TSPAN9-201ENST00000011898 LY6G5BQ8NDX9 201 aa9.46□□□□□ -0.9
TSPAN9-201ENST00000011898 FAM110DQ8TAY7 271 aaPredicted RBP9.46□□□□□ -0.9
TSPAN9-201ENST00000011898 TANC2Q9HCD6 1990 aa9.45□□□□□ -0.9
TSPAN9-201ENST00000011898 MSRB1Q9NZV6 116 aa9.45□□□□□ -0.9
TSPAN9-201ENST00000011898 UQCRQO14949 82 aa9.45□□□□□ -0.9
TSPAN9-201ENST00000011898 Q8N976 141 aa9.45□□□□□ -0.9
TSPAN9-201ENST00000011898 UBL5Q9BZL1 73 aa9.45□□□□□ -0.9
TSPAN9-201ENST00000011898 DMXL1Q9Y485 3027 aa9.45□□□□□ -0.9
TSPAN9-201ENST00000011898 AKAP13Q12802 2813 aa9.45□□□□□ -0.9
TSPAN9-201ENST00000011898 BAALC-AS2P0C853 105 aa9.45□□□□□ -0.9
TSPAN9-201ENST00000011898 RHPN1-AS1Q9BWJ2 59 aa9.45□□□□□ -0.9
TSPAN9-201ENST00000011898 SORL1Q92673 2214 aa9.44□□□□□ -0.9
TSPAN9-201ENST00000011898 TEX49A0A1B0GTD5 131 aa9.44□□□□□ -0.9
TSPAN9-201ENST00000011898 VWC2LB2RUY7 222 aa9.44□□□□□ -0.9
TSPAN9-201ENST00000011898 K7EIM0 57 aa9.44□□□□□ -0.9
TSPAN9-201ENST00000011898 DNAJC30Q96LL9 226 aa9.44□□□□□ -0.9
TSPAN9-201ENST00000011898 IGHV3-73A0A0B4J1V6 119 aa9.44□□□□□ -0.9
TSPAN9-201ENST00000011898 ITLN2Q8WWU7 325 aaPredicted RBP9.44□□□□□ -0.9
TSPAN9-201ENST00000011898 FAM110AQ9BQ89 295 aa9.44□□□□□ -0.9
TSPAN9-201ENST00000011898 V9GYY9 64 aa9.44□□□□□ -0.9
TSPAN9-201ENST00000011898 DMDP11532 3685 aa9.44□□□□□ -0.9
TSPAN9-201ENST00000011898 I3L2K1 104 aa9.44□□□□□ -0.9
TSPAN9-201ENST00000011898 LEPROTO15243 131 aa9.44□□□□□ -0.9
TSPAN9-201ENST00000011898 OVOL3O00110 214 aa9.43□□□□□ -0.9
TSPAN9-201ENST00000011898 C22orf34Q6ZV56 151 aa9.43□□□□□ -0.9
TSPAN9-201ENST00000011898 IGKV2D-26A0A0A0MRZ7 120 aa9.43□□□□□ -0.9
TSPAN9-201ENST00000011898 hADV29S1A0JD25 119 aa9.43□□□□□ -0.9
TSPAN9-201ENST00000011898 GATA3P23771 443 aa9.43□□□□□ -0.9
TSPAN9-201ENST00000011898 INS-IGF2F8WCM5 200 aa9.43□□□□□ -0.9
TSPAN9-201ENST00000011898 IGLV1-47P01700 117 aa9.43□□□□□ -0.9
TSPAN9-201ENST00000011898 IGLV2-23P01705 113 aa9.43□□□□□ -0.9
TSPAN9-201ENST00000011898 TM2D2Q9BX73 214 aa9.43□□□□□ -0.9
TSPAN9-201ENST00000011898 PKD1L2Q7Z442 2459 aa9.43□□□□□ -0.9
TSPAN9-201ENST00000011898 SMIM9A6NGZ8 99 aa9.42□□□□□ -0.9
TSPAN9-201ENST00000011898 EGR2P11161 476 aaPredicted RBP9.42□□□□□ -0.9
TSPAN9-201ENST00000011898 RUSC1-AS1Q66K80 236 aa9.42□□□□□ -0.9
TSPAN9-201ENST00000011898 TRBV10-2A0A0K0K1G8 114 aa9.42□□□□□ -0.9
TSPAN9-201ENST00000011898 KNCNA6PVL3 124 aa9.42□□□□□ -0.9
TSPAN9-201ENST00000011898 USMG5Q96IX5 58 aa9.42□□□□□ -0.9
TSPAN9-201ENST00000011898 LINC01587Q99440 93 aa9.42□□□□□ -0.9
TSPAN9-201ENST00000011898 MUSTN1Q8IVN3 82 aa9.42□□□□□ -0.9
TSPAN9-201ENST00000011898 TMEM86BQ8N661 226 aa9.42□□□□□ -0.9
TSPAN9-201ENST00000011898 PRSS22Q9GZN4 317 aa9.42□□□□□ -0.9
TSPAN9-201ENST00000011898 FN1P02751 2386 aaKnown RBP9.42□□□□□ -0.9
TSPAN9-201ENST00000011898 A0A0B4J2C4 111 aa9.42□□□□□ -0.9
TSPAN9-201ENST00000011898 DUSP14O95147 198 aaKnown RBP9.42□□□□□ -0.9
TSPAN9-201ENST00000011898 CRYGBP07316 175 aa9.42□□□□□ -0.9
TSPAN9-201ENST00000011898 IGLC6P0CF74 106 aa9.42□□□□□ -0.9
TSPAN9-201ENST00000011898 ADORA2A-AS1P86434 159 aa9.42□□□□□ -0.9
TSPAN9-201ENST00000011898 LINC00694P0DN24 101 aa9.41□□□□□ -0.9
TSPAN9-201ENST00000011898 Q96MF0 132 aa9.41□□□□□ -0.9
TSPAN9-201ENST00000011898 SDHAF1A6NFY7 115 aa9.41□□□□□ -0.9
TSPAN9-201ENST00000011898 FAM223BA6NKX1 122 aa9.41□□□□□ -0.9
TSPAN9-201ENST00000011898 FAM223AQ8IWN6 122 aa9.41□□□□□ -0.9
TSPAN9-201ENST00000011898 IGLV2-8P01709 118 aa9.41□□□□□ -0.9
TSPAN9-201ENST00000011898 OVOL2Q9BRP0 275 aa9.41□□□□□ -0.9
TSPAN9-201ENST00000011898 HECTD1Q9ULT8 2610 aa9.41□□□□□ -0.9
TSPAN9-201ENST00000011898 IGKV1D-37A0A075B6S9 117 aa9.4□□□□□ -0.9
TSPAN9-201ENST00000011898 A0A1B0GXF2 115 aa9.4□□□□□ -0.9
TSPAN9-201ENST00000011898 NDUFA7O95182 113 aa9.4□□□□□ -0.9
TSPAN9-201ENST00000011898 C1orf159Q96HA4 380 aa9.4□□□□□ -0.9
TSPAN9-201ENST00000011898 FBXL19-AS1Q494R0 122 aa9.4□□□□□ -0.9
TSPAN9-201ENST00000011898 NDUFA11Q86Y39 141 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms