RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Zic3Q62521 466 aa8.57□□□□□ -1.04
Ubr1-201ENSMUST00000028728 Olfr1382Q7TQT3 311 aa8.57□□□□□ -1.04
Ubr1-201ENSMUST00000028728 Fam214bQ8BR27 538 aa8.57□□□□□ -1.04
Ubr1-201ENSMUST00000028728 Slamf6Q9ET39 351 aa8.57□□□□□ -1.04
Ubr1-201ENSMUST00000028728 Mmp17Q9R0S3 578 aa8.57□□□□□ -1.04
Ubr1-201ENSMUST00000028728 Shank3Q4ACU6 1730 aa8.57□□□□□ -1.04
Ubr1-201ENSMUST00000028728 Pilrb2Q2YFS1 225 aa8.57□□□□□ -1.04
Ubr1-201ENSMUST00000028728 Olfr875Q7TRE5 310 aa8.57□□□□□ -1.04
Ubr1-201ENSMUST00000028728 Neurl3Q8CJC5 254 aa8.57□□□□□ -1.04
Ubr1-201ENSMUST00000028728 Spata45Q9CVW4 97 aa8.57□□□□□ -1.04
Ubr1-201ENSMUST00000028728 Prr30Q9D9B7 401 aa8.57□□□□□ -1.04
Ubr1-201ENSMUST00000028728 Ccl28Q9JIL2 130 aa8.57□□□□□ -1.04
Ubr1-201ENSMUST00000028728 Gm21976J3QNN2 249 aa8.57□□□□□ -1.04
Ubr1-201ENSMUST00000028728 CirbpP60824 172 aaKnown RBP8.57□□□□□ -1.04
Ubr1-201ENSMUST00000028728 Gm8882E9Q7E4 283 aa8.57□□□□□ -1.04
Ubr1-201ENSMUST00000028728 Ucp1P12242 307 aa8.57□□□□□ -1.04
Ubr1-201ENSMUST00000028728 PlnP61014 52 aa8.57□□□□□ -1.04
Ubr1-201ENSMUST00000028728 Bricd5Q8BV89 174 aa8.57□□□□□ -1.04
Ubr1-201ENSMUST00000028728 Pnrc2Q9CR73 140 aa8.57□□□□□ -1.04
Ubr1-201ENSMUST00000028728 Cryba2Q9JJV1 197 aa8.57□□□□□ -1.04
Ubr1-201ENSMUST00000028728 NynrinQ5DTZ0 1840 aa8.56□□□□□ -1.04
Ubr1-201ENSMUST00000028728 Trpm7Q923J1 1863 aa8.56□□□□□ -1.04
Ubr1-201ENSMUST00000028728 Ascl2O35885 263 aa8.56□□□□□ -1.04
Ubr1-201ENSMUST00000028728 Zcwpw2Q08EN7 125 aa8.56□□□□□ -1.04
Ubr1-201ENSMUST00000028728 CiartQ3TQ03 375 aa8.56□□□□□ -1.04
Ubr1-201ENSMUST00000028728 Rasl11aQ6IMB1 242 aa8.56□□□□□ -1.04
Ubr1-201ENSMUST00000028728 Igkv4-50A0A0B4J1J0 117 aa8.56□□□□□ -1.04
Ubr1-201ENSMUST00000028728 Ighv5-16A0A0B4J1P4 117 aa8.56□□□□□ -1.04
Ubr1-201ENSMUST00000028728 Gm14443A2ARX0 610 aa8.56□□□□□ -1.04
Ubr1-201ENSMUST00000028728 Foxh1O88621 401 aa8.56□□□□□ -1.04
Ubr1-201ENSMUST00000028728 Wfdc18P62810 74 aa8.56□□□□□ -1.04
Ubr1-201ENSMUST00000028728 Gm11110Q3U4K9 109 aa8.56□□□□□ -1.04
Ubr1-201ENSMUST00000028728 Dnase2bQ9QY48 354 aa8.56□□□□□ -1.04
Ubr1-201ENSMUST00000028728 Olfr1192-ps1A0A1L1SRD7 309 aa8.56□□□□□ -1.04
Ubr1-201ENSMUST00000028728 Gm21882J3QN86 361 aa8.56□□□□□ -1.04
Ubr1-201ENSMUST00000028728 Defa-rs7P50715 91 aa8.56□□□□□ -1.04
Ubr1-201ENSMUST00000028728 Gpbar1Q80SS6 329 aa8.56□□□□□ -1.04
Ubr1-201ENSMUST00000028728 Q9DAS2 200 aa8.56□□□□□ -1.04
Ubr1-201ENSMUST00000028728 Ly75Q60767 1723 aa8.56□□□□□ -1.04
Ubr1-201ENSMUST00000028728 Ltbp4Q8K4G1 1666 aa8.56□□□□□ -1.04
Ubr1-201ENSMUST00000028728 Ighv14-3A0A075B5R9 117 aa8.56□□□□□ -1.04
Ubr1-201ENSMUST00000028728 Trbv12-1A0A0B4J1H0 124 aa8.56□□□□□ -1.04
Ubr1-201ENSMUST00000028728 Ighv8-9A0A0G2JET1 119 aa8.56□□□□□ -1.04
Ubr1-201ENSMUST00000028728 Olfr1209Q3SXJ3 310 aa8.56□□□□□ -1.04
Ubr1-201ENSMUST00000028728 Fam206aQ80ZQ9 193 aaKnown RBP8.56□□□□□ -1.04
Ubr1-201ENSMUST00000028728 Znf787Q8BIF9 381 aa8.56□□□□□ -1.04
Ubr1-201ENSMUST00000028728 G6pc2Q9Z186 355 aa8.56□□□□□ -1.04
Ubr1-201ENSMUST00000028728 Dcaf10A2AKB9 566 aa8.56□□□□□ -1.04
Ubr1-201ENSMUST00000028728 Trav6-2Q5R1I4 113 aa8.56□□□□□ -1.04
Ubr1-201ENSMUST00000028728 Tspan2Q922J6 221 aa8.56□□□□□ -1.04
Ubr1-201ENSMUST00000028728 Prss29Q99MS4 279 aa8.56□□□□□ -1.04
Ubr1-201ENSMUST00000028728 Pax9P47242 342 aa8.56□□□□□ -1.04
Ubr1-201ENSMUST00000028728 Vmn1r197Q8R265 298 aa8.56□□□□□ -1.04
Ubr1-201ENSMUST00000028728 Gdf15Q9Z0J7 303 aa8.56□□□□□ -1.04
Ubr1-201ENSMUST00000028728 Kiaa0100Q5SYL3 2234 aa8.56□□□□□ -1.04
Ubr1-201ENSMUST00000028728 TracA0A075B662 137 aa8.55□□□□□ -1.04
Ubr1-201ENSMUST00000028728 Defb4P82019 63 aa8.55□□□□□ -1.04
Ubr1-201ENSMUST00000028728 Olfr433Q7TRV9 314 aa8.55□□□□□ -1.04
Ubr1-201ENSMUST00000028728 LenepQ9WVB6 61 aa8.55□□□□□ -1.04
Ubr1-201ENSMUST00000028728 Tcl1b2P56841 117 aa8.55□□□□□ -1.04
Ubr1-201ENSMUST00000028728 V1ra8Q9EQ48 279 aa8.55□□□□□ -1.04
Ubr1-201ENSMUST00000028728 Olfr1189A2AV11 306 aa8.55□□□□□ -1.04
Ubr1-201ENSMUST00000028728 Lbhd2G3UW55 114 aa8.55□□□□□ -1.04
Ubr1-201ENSMUST00000028728 Gm10283Q8C3L5 117 aa8.55□□□□□ -1.04
Ubr1-201ENSMUST00000028728 Defb5Q9EPV9 64 aa8.55□□□□□ -1.04
Ubr1-201ENSMUST00000028728 Zfp236S4R299 1847 aa8.55□□□□□ -1.04
Ubr1-201ENSMUST00000028728 BC053393A0A0B4J1F6 192 aa8.55□□□□□ -1.04
Ubr1-201ENSMUST00000028728 Gm45844A0A1B0GRQ2 137 aa8.55□□□□□ -1.04
Ubr1-201ENSMUST00000028728 Masp2Q91WP0 685 aa8.55□□□□□ -1.04
Ubr1-201ENSMUST00000028728 Tspoap1Q7TNF8 1846 aa8.55□□□□□ -1.04
Ubr1-201ENSMUST00000028728 Iqcf6G3UWF2 157 aa8.55□□□□□ -1.04
Ubr1-201ENSMUST00000028728 Il12rb1Q60837 738 aa8.55□□□□□ -1.04
Ubr1-201ENSMUST00000028728 GrhprQ91Z53 328 aa8.55□□□□□ -1.04
Ubr1-201ENSMUST00000028728 Srd5a2Q99N99 254 aa8.55□□□□□ -1.04
Ubr1-201ENSMUST00000028728 1500009C09RikD3YYW9 81 aa8.54□□□□□ -1.04
Ubr1-201ENSMUST00000028728 Ccl17F6R5P4 103 aa8.54□□□□□ -1.04
Ubr1-201ENSMUST00000028728 Mex3bQ69Z36 601 aaKnown RBP8.54□□□□□ -1.04
Ubr1-201ENSMUST00000028728 Stac2Q8R1B0 408 aa8.54□□□□□ -1.04
Ubr1-201ENSMUST00000028728 Insig2Q91WG1 225 aa8.54□□□□□ -1.04
Ubr1-201ENSMUST00000028728 Gm13030A2APQ6 143 aa8.54□□□□□ -1.04
Ubr1-201ENSMUST00000028728 Prelid3aQ8VE85 172 aa8.54□□□□□ -1.04
Ubr1-201ENSMUST00000028728 St6galnac6Q9JM95 333 aa8.54□□□□□ -1.04
Ubr1-201ENSMUST00000028728 Ndufa7Q9Z1P6 113 aaKnown RBP8.54□□□□□ -1.04
Ubr1-201ENSMUST00000028728 Scn2aA0A0J9YTW6 2006 aa8.54□□□□□ -1.04
Ubr1-201ENSMUST00000028728 Bcl6bO88282 474 aa8.54□□□□□ -1.04
Ubr1-201ENSMUST00000028728 D130052B06RikQ3UW13 202 aa8.54□□□□□ -1.04
Ubr1-201ENSMUST00000028728 Olfr476Q8VGI4 310 aa8.54□□□□□ -1.04
Ubr1-201ENSMUST00000028728 Timm10bQ9WV96 100 aa8.54□□□□□ -1.04
Ubr1-201ENSMUST00000028728 Tmem196V9GX04 182 aa8.54□□□□□ -1.04
Ubr1-201ENSMUST00000028728 Brwd3A2AHJ4 1799 aa8.54□□□□□ -1.04
Ubr1-201ENSMUST00000028728 Csn3P06796 181 aa8.54□□□□□ -1.04
Ubr1-201ENSMUST00000028728 Sox15P43267 231 aa8.54□□□□□ -1.04
Ubr1-201ENSMUST00000028728 Atp5g2P56383 146 aa8.54□□□□□ -1.04
Ubr1-201ENSMUST00000028728 Defb46Q4QY34 57 aa8.54□□□□□ -1.04
Ubr1-201ENSMUST00000028728 Mrpl14Q9D1I6 145 aa8.54□□□□□ -1.04
Ubr1-201ENSMUST00000028728 Otx1P80205 355 aa8.54□□□□□ -1.04
Ubr1-201ENSMUST00000028728 Lax1Q8BHB3 407 aa8.54□□□□□ -1.04
Ubr1-201ENSMUST00000028728 Wbp2nlQ9D529 359 aa8.54□□□□□ -1.04
Ubr1-201ENSMUST00000028728 Gpr35Q9ES90 307 aa8.54□□□□□ -1.04
Ubr1-201ENSMUST00000028728 Dock8Q8C147 2100 aa8.54□□□□□ -1.04
Retrieved 100 of 22,080 RNA–protein pairs in 32 ms