RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 TEX48A0A1B0GUV7 120 aa8.8□□□□□ -1
LINC00339-213ENST00000642137 H3BVH4 76 aa8.8□□□□□ -1
LINC00339-213ENST00000642137 M0R2P5 195 aa8.8□□□□□ -1
LINC00339-213ENST00000642137 PIK3CD-AS1Q5SR53 167 aa8.8□□□□□ -1
LINC00339-213ENST00000642137 FAM222AQ5U5X8 452 aa8.8□□□□□ -1
LINC00339-213ENST00000642137 WDR73Q6P4I2 378 aa8.8□□□□□ -1
LINC00339-213ENST00000642137 FER1L6-AS1Q8NA97 138 aa8.8□□□□□ -1
LINC00339-213ENST00000642137 RASL10AQ92737 203 aa8.8□□□□□ -1
LINC00339-213ENST00000642137 NDUFAF3Q9BU61 184 aa8.8□□□□□ -1
LINC00339-213ENST00000642137 TMEM242Q9NWH2 141 aa8.8□□□□□ -1
LINC00339-213ENST00000642137 MUC4Q99102 2169 aa8.79□□□□□ -1
LINC00339-213ENST00000642137 C7orf77A4D0Y5 90 aa8.79□□□□□ -1
LINC00339-213ENST00000642137 CXorf65A6NEN9 183 aa8.79□□□□□ -1
LINC00339-213ENST00000642137 RHEBQ15382 184 aa8.79□□□□□ -1
LINC00339-213ENST00000642137 LINC00612Q8N6U2 182 aa8.79□□□□□ -1
LINC00339-213ENST00000642137 GTSF1Q8WW33 167 aa8.79□□□□□ -1
LINC00339-213ENST00000642137 PHLDA3Q9Y5J5 127 aa8.79□□□□□ -1
LINC00339-213ENST00000642137 HUWE1Q7Z6Z7 4374 aaKnown RBP8.79□□□□□ -1
LINC00339-213ENST00000642137 NBEAL2Q6ZNJ1 2754 aa8.78□□□□□ -1
LINC00339-213ENST00000642137 A0A087WWC5 75 aa8.78□□□□□ -1
LINC00339-213ENST00000642137 SMIM27A0A1W2PRY6 76 aa8.78□□□□□ -1
LINC00339-213ENST00000642137 CACNG7P62955 275 aa8.78□□□□□ -1
LINC00339-213ENST00000642137 LYZL1Q6UWQ5 148 aa8.78□□□□□ -1
LINC00339-213ENST00000642137 IMMP2LQ96T52 175 aa8.78□□□□□ -1
LINC00339-213ENST00000642137 EDA2RQ9HAV5 297 aa8.78□□□□□ -1
LINC00339-213ENST00000642137 RPS10P5Q9NQ39 176 aa8.78□□□□□ -1
LINC00339-213ENST00000642137 NAT8BQ9UHF3 227 aa8.78□□□□□ -1
LINC00339-213ENST00000642137 MEGF8Q7Z7M0 2845 aa8.78□□□□□ -1
LINC00339-213ENST00000642137 IGHV4-4A0A075B6R2 117 aa8.77□□□□□ -1.01
LINC00339-213ENST00000642137 TRGV1A0A0A0MS02 117 aa8.77□□□□□ -1.01
LINC00339-213ENST00000642137 CTRLP40313 264 aa8.77□□□□□ -1.01
LINC00339-213ENST00000642137 ZNF876PQ49A33 203 aa8.77□□□□□ -1.01
LINC00339-213ENST00000642137 DMRTA1Q5VZB9 504 aa8.77□□□□□ -1.01
LINC00339-213ENST00000642137 Q6ZTI0 123 aa8.77□□□□□ -1.01
LINC00339-213ENST00000642137 ZFP82Q8N141 532 aa8.77□□□□□ -1.01
LINC00339-213ENST00000642137 SYT8Q8NBV8 401 aa8.77□□□□□ -1.01
LINC00339-213ENST00000642137 C11orf45Q8TAV5 145 aa8.77□□□□□ -1.01
LINC00339-213ENST00000642137 C18orf15Q96N68 181 aa8.77□□□□□ -1.01
LINC00339-213ENST00000642137 CELA1Q9UNI1 258 aa8.77□□□□□ -1.01
LINC00339-213ENST00000642137 GAGE12BA1L429 117 aa8.76□□□□□ -1.01
LINC00339-213ENST00000642137 HIGD1CA8MV81 97 aa8.76□□□□□ -1.01
LINC00339-213ENST00000642137 GAGE7O76087 117 aa8.76□□□□□ -1.01
LINC00339-213ENST00000642137 GAGE12FP0CL80 117 aa8.76□□□□□ -1.01
LINC00339-213ENST00000642137 GAGE12GP0CL81 117 aa8.76□□□□□ -1.01
LINC00339-213ENST00000642137 GAGE12IP0CL82 117 aa8.76□□□□□ -1.01
LINC00339-213ENST00000642137 DAD1P61803 113 aa8.76□□□□□ -1.01
LINC00339-213ENST00000642137 C12orf74Q32Q52 190 aa8.76□□□□□ -1.01
LINC00339-213ENST00000642137 SPANXN1Q5VSR9 72 aa8.76□□□□□ -1.01
LINC00339-213ENST00000642137 NUP35Q8NFH5 326 aa8.76□□□□□ -1.01
LINC00339-213ENST00000642137 OR10AG1Q8NH19 301 aa8.76□□□□□ -1.01
LINC00339-213ENST00000642137 PGLYRP4Q96LB8 373 aa8.76□□□□□ -1.01
LINC00339-213ENST00000642137 TPPP3Q9BW30 176 aa8.76□□□□□ -1.01
LINC00339-213ENST00000642137 CNFNQ9BYD5 112 aa8.76□□□□□ -1.01
LINC00339-213ENST00000642137 MRPL16Q9NX20 251 aaKnown RBP8.76□□□□□ -1.01
LINC00339-213ENST00000642137 CIDEAO60543 219 aa8.75□□□□□ -1.01
LINC00339-213ENST00000642137 NXPH4O95158 308 aa8.75□□□□□ -1.01
LINC00339-213ENST00000642137 DEFB130BP0DP73 79 aa8.75□□□□□ -1.01
LINC00339-213ENST00000642137 DEFB130AP0DP74 79 aa8.75□□□□□ -1.01
LINC00339-213ENST00000642137 NTF3P20783 257 aa8.75□□□□□ -1.01
LINC00339-213ENST00000642137 BORCS7Q96B45 105 aa8.75□□□□□ -1.01
LINC00339-213ENST00000642137 PRKDCP78527 4128 aaKnown RBP8.74□□□□□ -1.01
LINC00339-213ENST00000642137 TRGV2A0A075B6R0 118 aa8.74□□□□□ -1.01
LINC00339-213ENST00000642137 MUC21A0A0G2JKD1 596 aa8.74□□□□□ -1.01
LINC00339-213ENST00000642137 MUC21A0A140T8X8 626 aa8.74□□□□□ -1.01
LINC00339-213ENST00000642137 A0A1B0GUT8 65 aa8.74□□□□□ -1.01
LINC00339-213ENST00000642137 A8MWV9 139 aa8.74□□□□□ -1.01
LINC00339-213ENST00000642137 M0R381 172 aa8.74□□□□□ -1.01
LINC00339-213ENST00000642137 RS1O15537 224 aa8.74□□□□□ -1.01
LINC00339-213ENST00000642137 S100A1P23297 94 aa8.74□□□□□ -1.01
LINC00339-213ENST00000642137 FAM3BP58499 235 aaPredicted RBP8.74□□□□□ -1.01
LINC00339-213ENST00000642137 TRAV4A0A0B4J268 109 aa8.73□□□□□ -1.01
LINC00339-213ENST00000642137 NANOS2P60321 138 aaKnown RBP8.73□□□□□ -1.01
LINC00339-213ENST00000642137 SSTP61278 116 aa8.73□□□□□ -1.01
LINC00339-213ENST00000642137 RIGQ13278 110 aa8.73□□□□□ -1.01
LINC00339-213ENST00000642137 KCNIP4Q6PIL6 250 aa8.73□□□□□ -1.01
LINC00339-213ENST00000642137 ATRAIDQ6UW56 229 aa8.73□□□□□ -1.01
LINC00339-213ENST00000642137 POM121L12Q8N7R1 296 aa8.73□□□□□ -1.01
LINC00339-213ENST00000642137 OR4C5Q8NGB2 326 aa8.73□□□□□ -1.01
LINC00339-213ENST00000642137 MSRB1Q9NZV6 116 aa8.73□□□□□ -1.01
LINC00339-213ENST00000642137 FBN3Q75N90 2809 aa8.73□□□□□ -1.01
LINC00339-213ENST00000642137 TRAV9-1A0A075B6T8 112 aa8.72□□□□□ -1.01
LINC00339-213ENST00000642137 A0A1B0GW15 77 aa8.72□□□□□ -1.01
LINC00339-213ENST00000642137 ATP5G1P05496 136 aa8.72□□□□□ -1.01
LINC00339-213ENST00000642137 TRGC1P0CF51 173 aa8.72□□□□□ -1.01
LINC00339-213ENST00000642137 S100PP25815 95 aa8.72□□□□□ -1.01
LINC00339-213ENST00000642137 TWIST1Q15672 202 aa8.72□□□□□ -1.01
LINC00339-213ENST00000642137 CFAP126Q5VTH2 177 aa8.72□□□□□ -1.01
LINC00339-213ENST00000642137 JPT2Q9H910 190 aa8.72□□□□□ -1.01
LINC00339-213ENST00000642137 ATP6V1G1O75348 118 aa8.71□□□□□ -1.02
LINC00339-213ENST00000642137 CRYGDP07320 174 aa8.71□□□□□ -1.02
LINC00339-213ENST00000642137 ZFP2Q6ZN57 461 aa8.71□□□□□ -1.02
LINC00339-213ENST00000642137 Q6ZTC4 211 aa8.71□□□□□ -1.02
LINC00339-213ENST00000642137 ATP5L2Q7Z4Y8 100 aa8.71□□□□□ -1.02
LINC00339-213ENST00000642137 BTF3L4Q96K17 158 aa8.71□□□□□ -1.02
LINC00339-213ENST00000642137 TENM3Q9P273 2699 aa8.71□□□□□ -1.02
LINC00339-213ENST00000642137 NACAE9PAV3 2078 aa8.7□□□□□ -1.02
LINC00339-213ENST00000642137 SMIM17P0DL12 118 aa8.7□□□□□ -1.02
LINC00339-213ENST00000642137 UFSP1Q6NVU6 142 aa8.7□□□□□ -1.02
LINC00339-213ENST00000642137 SMIM15Q7Z3B0 74 aa8.7□□□□□ -1.02
LINC00339-213ENST00000642137 ZNF479Q96JC4 524 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms