RNA–Protein interactions for RNA: ENST00000641009.1

LINC00339-211, long intergenic non-protein coding RNA 339, humanhuman

Gene LINC00339, Length 1,450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-211ENST00000641009 TRBV6-4A0A1B0GX49 114 aa9.37□□□□□ -0.91
LINC00339-211ENST00000641009 A0A1W2PRE2 83 aa9.37□□□□□ -0.91
LINC00339-211ENST00000641009 UBE2G2P60604 165 aa9.37□□□□□ -0.91
LINC00339-211ENST00000641009 RHOHQ15669 191 aa9.37□□□□□ -0.91
LINC00339-211ENST00000641009 FAM210AQ96ND0 272 aa9.37□□□□□ -0.91
LINC00339-211ENST00000641009 PRADC1Q9BSG0 188 aa9.37□□□□□ -0.91
LINC00339-211ENST00000641009 BORCS7-ASMTA0A0B4J1R7 106 aa9.36□□□□□ -0.91
LINC00339-211ENST00000641009 KRTAP10-1P60331 282 aa9.36□□□□□ -0.91
LINC00339-211ENST00000641009 OR10J3Q5JRS4 329 aa9.36□□□□□ -0.91
LINC00339-211ENST00000641009 SAPCD1Q5SSQ6 148 aa9.36□□□□□ -0.91
LINC00339-211ENST00000641009 ARL2-SNX15V9GYD0 113 aa9.36□□□□□ -0.91
LINC00339-211ENST00000641009 IGKV3D-20A0A0C4DH25 116 aa9.35□□□□□ -0.91
LINC00339-211ENST00000641009 CTXND1A0A1B0GTU2 59 aa9.35□□□□□ -0.91
LINC00339-211ENST00000641009 CIDEAO60543 219 aa9.35□□□□□ -0.91
LINC00339-211ENST00000641009 IFNA7P01567 189 aa9.35□□□□□ -0.91
LINC00339-211ENST00000641009 FGF8P55075 233 aaPredicted RBP9.35□□□□□ -0.91
LINC00339-211ENST00000641009 XGP55808 180 aa9.35□□□□□ -0.91
LINC00339-211ENST00000641009 LINC01556Q5JQF7 62 aa9.35□□□□□ -0.91
LINC00339-211ENST00000641009 OR2T35Q8NGX2 323 aa9.35□□□□□ -0.91
LINC00339-211ENST00000641009 PTH2Q96A98 100 aa9.35□□□□□ -0.91
LINC00339-211ENST00000641009 TRAV8-6A0A0B4J262 113 aa9.34□□□□□ -0.91
LINC00339-211ENST00000641009 G3V3Q6 166 aa9.34□□□□□ -0.91
LINC00339-211ENST00000641009 PEX7O00628 323 aa9.34□□□□□ -0.91
LINC00339-211ENST00000641009 MGST1P10620 155 aaKnown RBP9.34□□□□□ -0.91
LINC00339-211ENST00000641009 Q6ZSN1 163 aa9.34□□□□□ -0.91
LINC00339-211ENST00000641009 Q9HAA7 133 aa9.34□□□□□ -0.91
LINC00339-211ENST00000641009 FAM74A7A6NL05 159 aa9.34□□□□□ -0.91
LINC00339-211ENST00000641009 IBA57-AS1B1ANH7 110 aa9.34□□□□□ -0.91
LINC00339-211ENST00000641009 PSCAO43653 123 aa9.34□□□□□ -0.91
LINC00339-211ENST00000641009 IGHV3-30P01768 117 aa9.34□□□□□ -0.91
LINC00339-211ENST00000641009 IGHV3-33P01772 117 aa9.34□□□□□ -0.91
LINC00339-211ENST00000641009 IGHV3-30-3P0DP02 117 aa9.34□□□□□ -0.91
LINC00339-211ENST00000641009 IGHV3-30-5P0DP03 117 aa9.34□□□□□ -0.91
LINC00339-211ENST00000641009 S100A4P26447 101 aaKnown RBP9.34□□□□□ -0.91
LINC00339-211ENST00000641009 Q86TA4 180 aa9.34□□□□□ -0.91
LINC00339-211ENST00000641009 ATP6V0E2Q8NHE4 81 aa9.34□□□□□ -0.91
LINC00339-211ENST00000641009 PARLQ9H300 379 aa9.34□□□□□ -0.91
LINC00339-211ENST00000641009 SRRM2Q9UQ35 2752 aaKnown RBP9.33□□□□□ -0.92
LINC00339-211ENST00000641009 FABP5P3A8MUU1 101 aa9.33□□□□□ -0.92
LINC00339-211ENST00000641009 EPM2AB3EWF7 344 aa9.33□□□□□ -0.92
LINC00339-211ENST00000641009 LGALSLQ3ZCW2 172 aaPredicted RBP9.33□□□□□ -0.92
LINC00339-211ENST00000641009 AKR1C8PQ5T2L2 129 aa9.33□□□□□ -0.92
LINC00339-211ENST00000641009 LELP1Q5T871 98 aa9.33□□□□□ -0.92
LINC00339-211ENST00000641009 GTSF1LQ9H1H1 148 aa9.33□□□□□ -0.92
LINC00339-211ENST00000641009 JPT2Q9H910 190 aa9.33□□□□□ -0.92
LINC00339-211ENST00000641009 VPS13BQ7Z7G8 4022 aa9.33□□□□□ -0.92
LINC00339-211ENST00000641009 LRCOL1A6NCL2 159 aa9.32□□□□□ -0.92
LINC00339-211ENST00000641009 B4DEV8 164 aa9.32□□□□□ -0.92
LINC00339-211ENST00000641009 GCSHP23434 173 aa9.32□□□□□ -0.92
LINC00339-211ENST00000641009 ASIPP42127 132 aa9.32□□□□□ -0.92
LINC00339-211ENST00000641009 CRIP1P50238 77 aa9.32□□□□□ -0.92
LINC00339-211ENST00000641009 AKAP14Q86UN6 197 aa9.32□□□□□ -0.92
LINC00339-211ENST00000641009 ZC2HC1AQ96GY0 325 aa9.32□□□□□ -0.92
LINC00339-211ENST00000641009 Q9UF83 564 aa9.32□□□□□ -0.92
LINC00339-211ENST00000641009 A8MWV9 139 aa9.31□□□□□ -0.92
LINC00339-211ENST00000641009 H3BVH4 76 aa9.31□□□□□ -0.92
LINC00339-211ENST00000641009 M0R036 132 aa9.31□□□□□ -0.92
LINC00339-211ENST00000641009 ARPC5O15511 151 aa9.31□□□□□ -0.92
LINC00339-211ENST00000641009 ZFP2Q6ZN57 461 aa9.31□□□□□ -0.92
LINC00339-211ENST00000641009 Q8N3U1 123 aa9.31□□□□□ -0.92
LINC00339-211ENST00000641009 HIST1H2BAQ96A08 127 aa9.31□□□□□ -0.92
LINC00339-211ENST00000641009 SAMD10Q9BYL1 202 aa9.31□□□□□ -0.92
LINC00339-211ENST00000641009 NKX6-2Q9C056 277 aaPredicted RBP9.31□□□□□ -0.92
LINC00339-211ENST00000641009 CYTL1Q9NRR1 136 aa9.31□□□□□ -0.92
LINC00339-211ENST00000641009 IL36BQ9NZH7 164 aa9.31□□□□□ -0.92
LINC00339-211ENST00000641009 DNAH8Q96JB1 4490 aa9.3□□□□□ -0.92
LINC00339-211ENST00000641009 MAP1LC3B2A6NCE7 125 aa9.3□□□□□ -0.92
LINC00339-211ENST00000641009 GAGE12JA6NER3 117 aa9.3□□□□□ -0.92
LINC00339-211ENST00000641009 GAGE1Q13065 139 aa9.3□□□□□ -0.92
LINC00339-211ENST00000641009 GAGE4Q13068 117 aa9.3□□□□□ -0.92
LINC00339-211ENST00000641009 GAGE5Q13069 117 aa9.3□□□□□ -0.92
LINC00339-211ENST00000641009 GAGE13Q4V321 117 aa9.3□□□□□ -0.92
LINC00339-211ENST00000641009 PIK3CD-AS1Q5SR53 167 aa9.3□□□□□ -0.92
LINC00339-211ENST00000641009 DMRTA1Q5VZB9 504 aa9.3□□□□□ -0.92
LINC00339-211ENST00000641009 MAP1LC3BQ9GZQ8 125 aa9.3□□□□□ -0.92
LINC00339-211ENST00000641009 BOLA1Q9Y3E2 137 aa9.3□□□□□ -0.92
LINC00339-211ENST00000641009 IGLV5-52A0A0A0MRZ9 124 aa9.29□□□□□ -0.92
LINC00339-211ENST00000641009 KRBOX1C9JBD0 128 aa9.29□□□□□ -0.92
LINC00339-211ENST00000641009 SH2D1AO60880 128 aa9.29□□□□□ -0.92
LINC00339-211ENST00000641009 LINC00694P0DN24 101 aa9.29□□□□□ -0.92
LINC00339-211ENST00000641009 HAMPP81172 84 aa9.29□□□□□ -0.92
LINC00339-211ENST00000641009 UFSP1Q6NVU6 142 aa9.29□□□□□ -0.92
LINC00339-211ENST00000641009 C14orf178Q8N769 122 aaPredicted RBP9.29□□□□□ -0.92
LINC00339-211ENST00000641009 HERC1Q15751 4861 aa9.29□□□□□ -0.92
LINC00339-211ENST00000641009 GRIFINA4D1Z8 144 aa9.28□□□□□ -0.92
LINC00339-211ENST00000641009 SMLR1H3BR10 107 aa9.28□□□□□ -0.92
LINC00339-211ENST00000641009 ARMS2P0C7Q2 107 aa9.28□□□□□ -0.92
LINC00339-211ENST00000641009 FHITP49789 147 aa9.28□□□□□ -0.92
LINC00339-211ENST00000641009 Q5VSD8 79 aa9.28□□□□□ -0.92
LINC00339-211ENST00000641009 Q8N814 137 aa9.28□□□□□ -0.92
LINC00339-211ENST00000641009 ZFP30Q9Y2G7 519 aa9.28□□□□□ -0.92
LINC00339-211ENST00000641009 MYCBP2O75592 4640 aa9.28□□□□□ -0.92
LINC00339-211ENST00000641009 ATP6V1G1O75348 118 aa9.28□□□□□ -0.92
LINC00339-211ENST00000641009 SMR3BP02814 79 aaPredicted RBP9.28□□□□□ -0.92
LINC00339-211ENST00000641009 UBE2G1P62253 170 aa9.28□□□□□ -0.92
LINC00339-211ENST00000641009 DNLZQ5SXM8 178 aa9.28□□□□□ -0.92
LINC00339-211ENST00000641009 FAM162BQ5T6X4 162 aa9.28□□□□□ -0.92
LINC00339-211ENST00000641009 CST9LP1Q5W188 147 aa9.28□□□□□ -0.92
LINC00339-211ENST00000641009 COX8CQ7Z4L0 72 aa9.28□□□□□ -0.92
LINC00339-211ENST00000641009 FMC1Q96HJ9 113 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms