RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 IGHV3OR16-10A0A075B7F0 116 aa8.25□□□□□ -1.09
SNIP1-204ENST00000638725 TRAV41A0A0B4J266 112 aa8.25□□□□□ -1.09
SNIP1-204ENST00000638725 RNASE4P34096 147 aaKnown RBP8.25□□□□□ -1.09
SNIP1-204ENST00000638725 SFTA2Q6UW10 78 aa8.25□□□□□ -1.09
SNIP1-204ENST00000638725 SCGB1D4Q6XE38 83 aa8.25□□□□□ -1.09
SNIP1-204ENST00000638725 IGKV3-7A0A075B6H7 116 aa8.25□□□□□ -1.09
SNIP1-204ENST00000638725 NPFFO15130 113 aa8.25□□□□□ -1.09
SNIP1-204ENST00000638725 DUSP14O95147 198 aaKnown RBP8.25□□□□□ -1.09
SNIP1-204ENST00000638725 KLHL30-AS1Q8NEE0 82 aa8.25□□□□□ -1.09
SNIP1-204ENST00000638725 MRPL16Q9NX20 251 aaKnown RBP8.25□□□□□ -1.09
SNIP1-204ENST00000638725 ZFHX3Q15911 3703 aa8.25□□□□□ -1.09
SNIP1-204ENST00000638725 PTPRZ1P23471 2315 aaPredicted RBP8.24□□□□□ -1.09
SNIP1-204ENST00000638725 LINC01549A6NIU2 74 aa8.24□□□□□ -1.09
SNIP1-204ENST00000638725 SOCS3O14543 225 aa8.24□□□□□ -1.09
SNIP1-204ENST00000638725 SCGB1A1P11684 91 aa8.24□□□□□ -1.09
SNIP1-204ENST00000638725 RNASE3P12724 160 aaKnown RBP8.24□□□□□ -1.09
SNIP1-204ENST00000638725 EMP1P54849 157 aa8.24□□□□□ -1.09
SNIP1-204ENST00000638725 CRYGDP07320 174 aa8.24□□□□□ -1.09
SNIP1-204ENST00000638725 COX6B1P14854 86 aa8.24□□□□□ -1.09
SNIP1-204ENST00000638725 BPESC1Q9GZL8 116 aa8.24□□□□□ -1.09
SNIP1-204ENST00000638725 OVOL1O14753 267 aa8.23□□□□□ -1.09
SNIP1-204ENST00000638725 RPL11P62913 178 aaKnown RBP8.23□□□□□ -1.09
SNIP1-204ENST00000638725 SRSF9Q13242 221 aaKnown RBP eCLIP8.23□□□□□ -1.09
SNIP1-204ENST00000638725 C11orf86A6NJI1 115 aa8.23□□□□□ -1.09
SNIP1-204ENST00000638725 FAM223BA6NKX1 122 aa8.23□□□□□ -1.09
SNIP1-204ENST00000638725 NDUFS8O00217 210 aa8.23□□□□□ -1.09
SNIP1-204ENST00000638725 SMCPP49901 116 aaPredicted RBP8.23□□□□□ -1.09
SNIP1-204ENST00000638725 LMO4P61968 165 aa8.23□□□□□ -1.09
SNIP1-204ENST00000638725 C19orf54Q5BKX5 351 aa8.23□□□□□ -1.09
SNIP1-204ENST00000638725 FAM223AQ8IWN6 122 aa8.23□□□□□ -1.09
SNIP1-204ENST00000638725 SPTBN1Q01082 2364 aaKnown RBP8.23□□□□□ -1.09
SNIP1-204ENST00000638725 APOMO95445 188 aa8.22□□□□□ -1.09
SNIP1-204ENST00000638725 TSHBP01222 138 aa8.22□□□□□ -1.09
SNIP1-204ENST00000638725 UBTD1Q9HAC8 227 aa8.22□□□□□ -1.09
SNIP1-204ENST00000638725 MOB4Q9Y3A3 225 aa8.22□□□□□ -1.09
SNIP1-204ENST00000638725 CEP295Q9C0D2 2601 aa8.22□□□□□ -1.09
SNIP1-204ENST00000638725 IGLV4-69A0A075B6H9 119 aa8.22□□□□□ -1.09
SNIP1-204ENST00000638725 LOC107984156A0A0G2JMH3 177 aa8.22□□□□□ -1.09
SNIP1-204ENST00000638725 TSPAN13O95857 204 aa8.22□□□□□ -1.09
SNIP1-204ENST00000638725 IGHV3-11P01762 117 aa8.22□□□□□ -1.09
SNIP1-204ENST00000638725 UBE2D1P51668 147 aa8.22□□□□□ -1.09
SNIP1-204ENST00000638725 CFAP126Q5VTH2 177 aa8.22□□□□□ -1.09
SNIP1-204ENST00000638725 ARL17AQ8IVW1 177 aa8.22□□□□□ -1.09
SNIP1-204ENST00000638725 JPT2Q9H910 190 aa8.22□□□□□ -1.09
SNIP1-204ENST00000638725 TP53TG1Q9Y2A0 90 aa8.22□□□□□ -1.09
SNIP1-204ENST00000638725 MUC4Q99102 2169 aa8.22□□□□□ -1.09
SNIP1-204ENST00000638725 TMEM238LA0A1B0GVL6 79 aa8.22□□□□□ -1.09
SNIP1-204ENST00000638725 A6NJY4 79 aa8.22□□□□□ -1.09
SNIP1-204ENST00000638725 MED14OSP0DP75 135 aa8.22□□□□□ -1.09
SNIP1-204ENST00000638725 ZFP2Q6ZN57 461 aa8.22□□□□□ -1.09
SNIP1-204ENST00000638725 DLX4Q92988 240 aaPredicted RBP8.22□□□□□ -1.09
SNIP1-204ENST00000638725 FAM19A4Q96LR4 140 aa8.22□□□□□ -1.09
SNIP1-204ENST00000638725 NDUFA4O00483 81 aa8.21□□□□□ -1.1
SNIP1-204ENST00000638725 PSMB2P49721 201 aa8.21□□□□□ -1.1
SNIP1-204ENST00000638725 RPL39P62891 51 aaKnown RBP8.21□□□□□ -1.1
SNIP1-204ENST00000638725 LINC00315P59091 139 aa8.21□□□□□ -1.1
SNIP1-204ENST00000638725 ATP6V0BQ99437 205 aa8.21□□□□□ -1.1
SNIP1-204ENST00000638725 KIF25-AS1Q9Y6Z4 181 aa8.21□□□□□ -1.1
SNIP1-204ENST00000638725 CD7P09564 240 aa8.2□□□□□ -1.1
SNIP1-204ENST00000638725 FOXI1Q12951 378 aa8.2□□□□□ -1.1
SNIP1-204ENST00000638725 BRD3OSQ6XYD6 125 aa8.2□□□□□ -1.1
SNIP1-204ENST00000638725 WFDC12Q8WWY7 111 aa8.2□□□□□ -1.1
SNIP1-204ENST00000638725 C1QTNF4Q9BXJ3 329 aa8.2□□□□□ -1.1
SNIP1-204ENST00000638725 AKAP6Q13023 2319 aa8.2□□□□□ -1.1
SNIP1-204ENST00000638725 A0A0J9YY99 117 aa8.2□□□□□ -1.1
SNIP1-204ENST00000638725 SRD5A1P18405 259 aa8.2□□□□□ -1.1
SNIP1-204ENST00000638725 NBL1P41271 181 aa8.2□□□□□ -1.1
SNIP1-204ENST00000638725 Q6ZS46 218 aa8.2□□□□□ -1.1
SNIP1-204ENST00000638725 NFE4Q86UQ8 179 aa8.2□□□□□ -1.1
SNIP1-204ENST00000638725 APRG1Q8IVJ8 170 aa8.2□□□□□ -1.1
SNIP1-204ENST00000638725 ZNF418Q8TF45 676 aaPredicted RBP8.2□□□□□ -1.1
SNIP1-204ENST00000638725 A0A087WWL8 130 aa8.19□□□□□ -1.1
SNIP1-204ENST00000638725 IGIPA6NJ69 53 aa8.19□□□□□ -1.1
SNIP1-204ENST00000638725 PPP1R17O96001 155 aa8.19□□□□□ -1.1
SNIP1-204ENST00000638725 TSPEAR-AS2P59090 65 aa8.19□□□□□ -1.1
SNIP1-204ENST00000638725 SUMO4Q6EEV6 95 aa8.19□□□□□ -1.1
SNIP1-204ENST00000638725 PTH2Q96A98 100 aa8.19□□□□□ -1.1
SNIP1-204ENST00000638725 IGHV1-69DA0A0B4J2H0 117 aa8.19□□□□□ -1.1
SNIP1-204ENST00000638725 NXPH4O95158 308 aa8.19□□□□□ -1.1
SNIP1-204ENST00000638725 CRIP2P52943 208 aaPredicted RBP8.19□□□□□ -1.1
SNIP1-204ENST00000638725 HERVK_113P61574 105 aa8.19□□□□□ -1.1
SNIP1-204ENST00000638725 POM121L12Q8N7R1 296 aa8.19□□□□□ -1.1
SNIP1-204ENST00000638725 SYT8Q8NBV8 401 aa8.19□□□□□ -1.1
SNIP1-204ENST00000638725 COL6A6A6NMZ7 2263 aa8.18□□□□□ -1.1
SNIP1-204ENST00000638725 EDN2P20800 178 aa8.18□□□□□ -1.1
SNIP1-204ENST00000638725 POLR2KP53803 58 aaKnown RBP8.18□□□□□ -1.1
SNIP1-204ENST00000638725 UBE2D3P61077 147 aa8.18□□□□□ -1.1
SNIP1-204ENST00000638725 UBE2D2P62837 147 aa8.18□□□□□ -1.1
SNIP1-204ENST00000638725 KLRB1Q12918 225 aa8.18□□□□□ -1.1
SNIP1-204ENST00000638725 PMVKQ15126 192 aa8.18□□□□□ -1.1
SNIP1-204ENST00000638725 LY6EQ16553 131 aa8.18□□□□□ -1.1
SNIP1-204ENST00000638725 NDUFA11Q86Y39 141 aa8.18□□□□□ -1.1
SNIP1-204ENST00000638725 RHPN1-AS1Q9BWJ2 59 aa8.18□□□□□ -1.1
SNIP1-204ENST00000638725 ATRXP46100 2492 aa8.18□□□□□ -1.1
SNIP1-204ENST00000638725 MUC6Q6W4X9 2439 aa8.18□□□□□ -1.1
SNIP1-204ENST00000638725 IGHV4OR15-8A0A075B7B6 117 aa8.18□□□□□ -1.1
SNIP1-204ENST00000638725 A0A087WW49 117 aa8.18□□□□□ -1.1
SNIP1-204ENST00000638725 TMEM170BQ5T4T1 132 aa8.18□□□□□ -1.1
SNIP1-204ENST00000638725 A0A1B0GV72 72 aa8.17□□□□□ -1.1
SNIP1-204ENST00000638725 F5H697 171 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 115.8 ms