RNA–Protein interactions for RNA: ENST00000638372.1

SCARB2-208, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-208ENST00000638372 H3BUA1 57 aa11.16□□□□□ -0.62
SCARB2-208ENST00000638372 I3L3M4 83 aa11.16□□□□□ -0.62
SCARB2-208ENST00000638372 COA6Q5JTJ3 125 aaKnown RBP11.16□□□□□ -0.62
SCARB2-208ENST00000638372 COX11Q9Y6N1 276 aa11.16□□□□□ -0.62
SCARB2-208ENST00000638372 C5orf56Q8N8D9 126 aa11.16□□□□□ -0.62
SCARB2-208ENST00000638372 LGALS9BQ3B8N2 356 aa11.16□□□□□ -0.62
SCARB2-208ENST00000638372 LGALS9CQ6DKI2 356 aa11.16□□□□□ -0.62
SCARB2-208ENST00000638372 ATP6V0BQ99437 205 aa11.16□□□□□ -0.62
SCARB2-208ENST00000638372 HCFC1P51610 2035 aa11.15□□□□□ -0.62
SCARB2-208ENST00000638372 A0A1B0GV72 72 aa11.15□□□□□ -0.62
SCARB2-208ENST00000638372 SLURP1P55000 103 aa11.15□□□□□ -0.62
SCARB2-208ENST00000638372 IGF2BP2-AS1Q96M15 143 aa11.15□□□□□ -0.62
SCARB2-208ENST00000638372 ZNF747Q9BV97 191 aa11.15□□□□□ -0.62
SCARB2-208ENST00000638372 MYMXA0A1B0GTQ4 84 aa11.15□□□□□ -0.62
SCARB2-208ENST00000638372 DEFB113Q30KQ7 82 aa11.15□□□□□ -0.62
SCARB2-208ENST00000638372 C10orf126Q8N4M7 172 aa11.15□□□□□ -0.62
SCARB2-208ENST00000638372 WIPF2Q8TF74 440 aaPredicted RBP11.15□□□□□ -0.62
SCARB2-208ENST00000638372 FANCD2OSQ96PS1 177 aa11.15□□□□□ -0.62
SCARB2-208ENST00000638372 RNASE13Q5GAN3 156 aaKnown RBP11.15□□□□□ -0.63
SCARB2-208ENST00000638372 F8VRH5 84 aa11.14□□□□□ -0.63
SCARB2-208ENST00000638372 CRYGCP07315 174 aa11.14□□□□□ -0.63
SCARB2-208ENST00000638372 GATD1Q8NB37 220 aa11.14□□□□□ -0.63
SCARB2-208ENST00000638372 GTSF1Q8WW33 167 aa11.14□□□□□ -0.63
SCARB2-208ENST00000638372 VWC2LB2RUY7 222 aa11.14□□□□□ -0.63
SCARB2-208ENST00000638372 S100A7L2Q5SY68 101 aa11.14□□□□□ -0.63
SCARB2-208ENST00000638372 LGALS1P09382 135 aaKnown RBP11.14□□□□□ -0.63
SCARB2-208ENST00000638372 LINC00173Q6ZV60 143 aa11.14□□□□□ -0.63
SCARB2-208ENST00000638372 JPT2Q9H910 190 aa11.14□□□□□ -0.63
SCARB2-208ENST00000638372 COX8AP10176 69 aa11.14□□□□□ -0.63
SCARB2-208ENST00000638372 TDRG1Q3Y452 100 aa11.14□□□□□ -0.63
SCARB2-208ENST00000638372 MTURNQ8N3F0 131 aa11.13□□□□□ -0.63
SCARB2-208ENST00000638372 F5H768 121 aa11.13□□□□□ -0.63
SCARB2-208ENST00000638372 INS-IGF2F8WCM5 200 aa11.13□□□□□ -0.63
SCARB2-208ENST00000638372 DAZAP2Q15038 168 aaPredicted RBP11.13□□□□□ -0.63
SCARB2-208ENST00000638372 APRG1Q8IVJ8 170 aa11.13□□□□□ -0.63
SCARB2-208ENST00000638372 TNRC6AQ8NDV7 1962 aaKnown RBP11.13□□□□□ -0.63
SCARB2-208ENST00000638372 HLA-DRB4P13762 266 aa11.13□□□□□ -0.63
SCARB2-208ENST00000638372 ZNF503Q96F45 646 aa11.13□□□□□ -0.63
SCARB2-208ENST00000638372 SIRPDQ9H106 197 aa11.13□□□□□ -0.63
SCARB2-208ENST00000638372 HLA-DRB4X5D2U9 266 aa11.13□□□□□ -0.63
SCARB2-208ENST00000638372 PTPRSQ13332 1948 aa11.13□□□□□ -0.63
SCARB2-208ENST00000638372 POLQO75417 2590 aa11.13□□□□□ -0.63
SCARB2-208ENST00000638372 IGKV1D-37A0A075B6S9 117 aa11.12□□□□□ -0.63
SCARB2-208ENST00000638372 SLC25A20O43772 301 aa11.12□□□□□ -0.63
SCARB2-208ENST00000638372 DLX4Q92988 240 aaPredicted RBP11.12□□□□□ -0.63
SCARB2-208ENST00000638372 LENEPQ9Y5L5 61 aa11.12□□□□□ -0.63
SCARB2-208ENST00000638372 MRPL52Q86TS9 123 aaKnown RBP11.12□□□□□ -0.63
SCARB2-208ENST00000638372 ATXN8Q156A1 80 aa11.12□□□□□ -0.63
SCARB2-208ENST00000638372 MRPL53Q96EL3 112 aaKnown RBP11.11□□□□□ -0.63
SCARB2-208ENST00000638372 TMEM141Q96I45 108 aa11.11□□□□□ -0.63
SCARB2-208ENST00000638372 NUP210LQ5VU65 1888 aa11.11□□□□□ -0.63
SCARB2-208ENST00000638372 RBAKDNA6NC62 111 aa11.11□□□□□ -0.63
SCARB2-208ENST00000638372 LINC01548A6NM66 108 aa11.11□□□□□ -0.63
SCARB2-208ENST00000638372 C19orf84I3L1E1 186 aa11.11□□□□□ -0.63
SCARB2-208ENST00000638372 CCL24O00175 119 aa11.11□□□□□ -0.63
SCARB2-208ENST00000638372 FOXI2Q6ZQN5 318 aa11.11□□□□□ -0.63
SCARB2-208ENST00000638372 A0A096LPF7 62 aa11.11□□□□□ -0.63
SCARB2-208ENST00000638372 WI2-2373I1.2A0A1W2PRP0 233 aa11.11□□□□□ -0.63
SCARB2-208ENST00000638372 LMO4P61968 165 aa11.11□□□□□ -0.63
SCARB2-208ENST00000638372 GAGE6Q13070 117 aa11.1□□□□□ -0.63
SCARB2-208ENST00000638372 KLF5Q13887 457 aaPredicted RBP11.1□□□□□ -0.63
SCARB2-208ENST00000638372 RPL39LQ96EH5 51 aaKnown RBP11.1□□□□□ -0.63
SCARB2-208ENST00000638372 C20orf78Q9BR46 151 aa11.1□□□□□ -0.63
SCARB2-208ENST00000638372 LINC00574Q9H8X3 128 aa11.1□□□□□ -0.63
SCARB2-208ENST00000638372 C16orf54Q6UWD8 224 aa11.1□□□□□ -0.63
SCARB2-208ENST00000638372 KLF12Q9Y4X4 402 aa11.1□□□□□ -0.63
SCARB2-208ENST00000638372 TRBV25-1A0A075B6N4 114 aa11.1□□□□□ -0.63
SCARB2-208ENST00000638372 DAD1P61803 113 aa11.1□□□□□ -0.63
SCARB2-208ENST00000638372 UNQ9165/PRO28630Q6UXU0 137 aa11.1□□□□□ -0.63
SCARB2-208ENST00000638372 CST9LQ9H4G1 147 aa11.1□□□□□ -0.63
SCARB2-208ENST00000638372 TRBV12-3P01733 135 aa11.1□□□□□ -0.63
SCARB2-208ENST00000638372 PRSS29PA6NIE9 313 aa11.09□□□□□ -0.63
SCARB2-208ENST00000638372 TRAV8-3A0A0A6YYJ7 113 aa11.09□□□□□ -0.63
SCARB2-208ENST00000638372 NPSP0C0P6 89 aa11.09□□□□□ -0.63
SCARB2-208ENST00000638372 PFN2P35080 140 aa11.09□□□□□ -0.63
SCARB2-208ENST00000638372 SS18Q15532 418 aa11.09□□□□□ -0.63
SCARB2-208ENST00000638372 Q6ZVH6 145 aa11.09□□□□□ -0.63
SCARB2-208ENST00000638372 PCP2Q8IVA1 136 aa11.09□□□□□ -0.63
SCARB2-208ENST00000638372 EPG5Q9HCE0 2579 aa11.08□□□□□ -0.64
SCARB2-208ENST00000638372 C9JAW5 83 aa11.08□□□□□ -0.64
SCARB2-208ENST00000638372 C2orf82Q6UX34 121 aa11.08□□□□□ -0.64
SCARB2-208ENST00000638372 KLF2Q9Y5W3 355 aaPredicted RBP11.08□□□□□ -0.64
SCARB2-208ENST00000638372 U3KQE9 123 aa11.08□□□□□ -0.64
SCARB2-208ENST00000638372 SIGMAR1Q99720 223 aa11.08□□□□□ -0.64
SCARB2-208ENST00000638372 BVES-AS1Q5T3Y7 98 aa11.08□□□□□ -0.64
SCARB2-208ENST00000638372 TMEM243Q9BU79 118 aa11.08□□□□□ -0.64
SCARB2-208ENST00000638372 NOP10Q9NPE3 64 aaKnown RBP11.08□□□□□ -0.64
SCARB2-208ENST00000638372 NDUFA12Q9UI09 145 aa11.08□□□□□ -0.64
SCARB2-208ENST00000638372 IGHV4OR15-8A0A075B7B6 117 aa11.07□□□□□ -0.64
SCARB2-208ENST00000638372 A0A087WW49 117 aa11.07□□□□□ -0.64
SCARB2-208ENST00000638372 IGHG2P01859 326 aa11.07□□□□□ -0.64
SCARB2-208ENST00000638372 ZNF493Q6ZR52 646 aa11.07□□□□□ -0.64
SCARB2-208ENST00000638372 LEPROTO15243 131 aa11.07□□□□□ -0.64
SCARB2-208ENST00000638372 EIF4EBP1Q13541 118 aaPredicted RBP11.07□□□□□ -0.64
SCARB2-208ENST00000638372 ADAMTSL5Q6ZMM2 481 aa11.06□□□□□ -0.64
SCARB2-208ENST00000638372 K7ERJ3 54 aa11.06□□□□□ -0.64
SCARB2-208ENST00000638372 TRAV8-4A0A0B4J246 113 aa11.06□□□□□ -0.64
SCARB2-208ENST00000638372 J3QQQ9 107 aa11.06□□□□□ -0.64
SCARB2-208ENST00000638372 TSSC4Q9Y5U2 329 aaPredicted RBP11.06□□□□□ -0.64
SCARB2-208ENST00000638372 ETDBQ3ZM63 59 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms