RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-223ENST00000637823 SNURFLB1AK76 121 aa8.57□□□□□ -1.04
CLN6-223ENST00000637823 FABP9Q0Z7S8 132 aa8.57□□□□□ -1.04
CLN6-223ENST00000637823 TWIST1Q15672 202 aa8.57□□□□□ -1.04
CLN6-223ENST00000637823 SPANXN1Q5VSR9 72 aa8.57□□□□□ -1.04
CLN6-223ENST00000637823 GATD1Q8NB37 220 aa8.57□□□□□ -1.04
CLN6-223ENST00000637823 CSNK1G2-AS1Q8NCQ2 148 aa8.57□□□□□ -1.04
CLN6-223ENST00000637823 C9orf85Q96MD7 179 aa8.57□□□□□ -1.04
CLN6-223ENST00000637823 MRPL18Q9H0U6 180 aaKnown RBP8.57□□□□□ -1.04
CLN6-223ENST00000637823 PHLDA3Q9Y5J5 127 aa8.57□□□□□ -1.04
CLN6-223ENST00000637823 TIMM8BQ9Y5J9 83 aaPredicted RBP8.57□□□□□ -1.04
CLN6-223ENST00000637823 ANK2Q01484 3957 aa8.56□□□□□ -1.04
CLN6-223ENST00000637823 G3V4G9 280 aa8.56□□□□□ -1.04
CLN6-223ENST00000637823 HTN1P15515 57 aa8.56□□□□□ -1.04
CLN6-223ENST00000637823 APOC4P55056 127 aa8.56□□□□□ -1.04
CLN6-223ENST00000637823 RAB5BP61020 215 aa8.56□□□□□ -1.04
CLN6-223ENST00000637823 SSTP61278 116 aa8.56□□□□□ -1.04
CLN6-223ENST00000637823 ZNF493Q6ZR52 646 aa8.56□□□□□ -1.04
CLN6-223ENST00000637823 OR10AG1Q8NH19 301 aa8.56□□□□□ -1.04
CLN6-223ENST00000637823 FRZBQ92765 325 aa8.56□□□□□ -1.04
CLN6-223ENST00000637823 MDFICQ9P1T7 246 aa8.56□□□□□ -1.04
CLN6-223ENST00000637823 IGHV3OR16-12A0A075B7B8 117 aa8.55□□□□□ -1.04
CLN6-223ENST00000637823 A8MZ25 164 aa8.55□□□□□ -1.04
CLN6-223ENST00000637823 UBE2CO00762 179 aa8.55□□□□□ -1.04
CLN6-223ENST00000637823 PHOX2AO14813 284 aa8.55□□□□□ -1.04
CLN6-223ENST00000637823 APCSP02743 223 aa8.55□□□□□ -1.04
CLN6-223ENST00000637823 IGHV4-30-4P0DP06 118 aa8.55□□□□□ -1.04
CLN6-223ENST00000637823 ZNF415Q09FC8 603 aa8.55□□□□□ -1.04
CLN6-223ENST00000637823 SPXQ9BT56 116 aa8.55□□□□□ -1.04
CLN6-223ENST00000637823 MSRB1Q9NZV6 116 aa8.55□□□□□ -1.04
CLN6-223ENST00000637823 NXPH4O95158 308 aa8.54□□□□□ -1.04
CLN6-223ENST00000637823 ZNF705AQ6ZN79 300 aaPredicted RBP8.54□□□□□ -1.04
CLN6-223ENST00000637823 SMIM15Q7Z3B0 74 aa8.54□□□□□ -1.04
CLN6-223ENST00000637823 ZFP82Q8N141 532 aa8.54□□□□□ -1.04
CLN6-223ENST00000637823 PTH2Q96A98 100 aa8.54□□□□□ -1.04
CLN6-223ENST00000637823 TMEM191AQ9H0A3 160 aa8.54□□□□□ -1.04
CLN6-223ENST00000637823 TMA7Q9Y2S6 64 aaKnown RBP8.54□□□□□ -1.04
CLN6-223ENST00000637823 M0R381 172 aa8.53□□□□□ -1.04
CLN6-223ENST00000637823 PRM2P04554 102 aa8.53□□□□□ -1.04
CLN6-223ENST00000637823 TRGC1P0CF51 173 aa8.53□□□□□ -1.04
CLN6-223ENST00000637823 C11orf72Q8NBR9 251 aa8.53□□□□□ -1.04
CLN6-223ENST00000637823 SYT8Q8NBV8 401 aa8.53□□□□□ -1.04
CLN6-223ENST00000637823 SMIM9A6NGZ8 99 aa8.52□□□□□ -1.05
CLN6-223ENST00000637823 SPRY2O43597 315 aa8.52□□□□□ -1.05
CLN6-223ENST00000637823 AZU1P20160 251 aa8.52□□□□□ -1.05
CLN6-223ENST00000637823 SLAQ13239 276 aa8.52□□□□□ -1.05
CLN6-223ENST00000637823 PIK3CD-AS1Q5SR53 167 aa8.52□□□□□ -1.05
CLN6-223ENST00000637823 KPRPQ5T749 579 aaPredicted RBP8.52□□□□□ -1.05
CLN6-223ENST00000637823 DMRTA1Q5VZB9 504 aa8.52□□□□□ -1.05
CLN6-223ENST00000637823 FAM104BQ5XKR9 115 aa8.52□□□□□ -1.05
CLN6-223ENST00000637823 TMEM263Q8WUH6 116 aaKnown RBP8.52□□□□□ -1.05
CLN6-223ENST00000637823 RCHY1Q96PM5 261 aa8.52□□□□□ -1.05
CLN6-223ENST00000637823 GSN-AS1Q9NRJ2 163 aa8.52□□□□□ -1.05
CLN6-223ENST00000637823 M0R2P5 195 aa8.51□□□□□ -1.05
CLN6-223ENST00000637823 HIST1H2BKO60814 126 aa8.51□□□□□ -1.05
CLN6-223ENST00000637823 HIST1H2BJP06899 126 aa8.51□□□□□ -1.05
CLN6-223ENST00000637823 HIST1H2BOP23527 126 aa8.51□□□□□ -1.05
CLN6-223ENST00000637823 HIST1H2BBP33778 126 aa8.51□□□□□ -1.05
CLN6-223ENST00000637823 HIST1H2BDP58876 126 aa8.51□□□□□ -1.05
CLN6-223ENST00000637823 HIST1H2BCP62807 126 aa8.51□□□□□ -1.05
CLN6-223ENST00000637823 HIST2H2BEQ16778 126 aa8.51□□□□□ -1.05
CLN6-223ENST00000637823 RRN3P1Q2M238 152 aa8.51□□□□□ -1.05
CLN6-223ENST00000637823 KIAA1644Q3SXP7 199 aa8.51□□□□□ -1.05
CLN6-223ENST00000637823 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.51□□□□□ -1.05
CLN6-223ENST00000637823 RNASE8Q8TDE3 154 aaKnown RBP8.51□□□□□ -1.05
CLN6-223ENST00000637823 HIST1H2BHQ93079 126 aa8.51□□□□□ -1.05
CLN6-223ENST00000637823 C16orf74Q96GX8 76 aa8.51□□□□□ -1.05
CLN6-223ENST00000637823 HIST1H2BNQ99877 126 aa8.51□□□□□ -1.05
CLN6-223ENST00000637823 HIST1H2BMQ99879 126 aa8.51□□□□□ -1.05
CLN6-223ENST00000637823 RAB4AP20338 218 aa8.5□□□□□ -1.05
CLN6-223ENST00000637823 EVI2AP22794 236 aa8.5□□□□□ -1.05
CLN6-223ENST00000637823 ZNF876PQ49A33 203 aa8.5□□□□□ -1.05
CLN6-223ENST00000637823 Q6ZWC4 215 aa8.5□□□□□ -1.05
CLN6-223ENST00000637823 AP1S3Q96PC3 154 aa8.5□□□□□ -1.05
CLN6-223ENST00000637823 SMIM17P0DL12 118 aa8.49□□□□□ -1.05
CLN6-223ENST00000637823 DAZ2Q13117 558 aaKnown RBP8.49□□□□□ -1.05
CLN6-223ENST00000637823 MRPL51Q4U2R6 128 aaKnown RBP8.49□□□□□ -1.05
CLN6-223ENST00000637823 AMN1Q8IY45 258 aa8.49□□□□□ -1.05
CLN6-223ENST00000637823 IL17DQ8TAD2 202 aa8.49□□□□□ -1.05
CLN6-223ENST00000637823 RNF185Q96GF1 192 aa8.49□□□□□ -1.05
CLN6-223ENST00000637823 ALKBH7Q9BT30 221 aaPredicted RBP8.49□□□□□ -1.05
CLN6-223ENST00000637823 NDUFAF3Q9BU61 184 aa8.49□□□□□ -1.05
CLN6-223ENST00000637823 DPH3P1Q9H4G8 78 aa8.49□□□□□ -1.05
CLN6-223ENST00000637823 NACAE9PAV3 2078 aa8.49□□□□□ -1.05
CLN6-223ENST00000637823 PPBPP02775 128 aa8.48□□□□□ -1.05
CLN6-223ENST00000637823 DEFB135Q30KP9 77 aa8.48□□□□□ -1.05
CLN6-223ENST00000637823 LGALS9BQ3B8N2 356 aa8.48□□□□□ -1.05
CLN6-223ENST00000637823 C14orf178Q8N769 122 aaPredicted RBP8.48□□□□□ -1.05
CLN6-223ENST00000637823 RASL10AQ92737 203 aa8.48□□□□□ -1.05
CLN6-223ENST00000637823 RNF183Q96D59 192 aa8.48□□□□□ -1.05
CLN6-223ENST00000637823 OVOL2Q9BRP0 275 aa8.48□□□□□ -1.05
CLN6-223ENST00000637823 KIF25-AS1Q9Y6Z4 181 aa8.48□□□□□ -1.05
CLN6-223ENST00000637823 U3KQK5 164 aa8.48□□□□□ -1.05
CLN6-223ENST00000637823 X6R8D5 127 aa8.48□□□□□ -1.05
CLN6-223ENST00000637823 DNAH3Q8TD57 4116 aa8.48□□□□□ -1.05
CLN6-223ENST00000637823 PLAC8L1A1L4L8 177 aa8.47□□□□□ -1.05
CLN6-223ENST00000637823 A8MWV9 139 aa8.47□□□□□ -1.05
CLN6-223ENST00000637823 S100A6P06703 90 aa8.47□□□□□ -1.05
CLN6-223ENST00000637823 SRIP30626 198 aa8.47□□□□□ -1.05
CLN6-223ENST00000637823 CKS2P33552 79 aa8.47□□□□□ -1.05
CLN6-223ENST00000637823 NDUFA6P56556 154 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms