RNA–Protein interactions for RNA: ENST00000637671.1

SYNGAP1-223, Transcript of synaptic Ras GTPase activating protein 1, human

TSL 5

Gene SYNGAP1, Length 100 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SYNGAP1-223	ENST00000637671	NIT1	Q86X76	327 aa		7.61	□□□□□ -1.19
SYNGAP1-223	ENST00000637671	C9orf85	Q96MD7	179 aa		7.61	□□□□□ -1.19
SYNGAP1-223	ENST00000637671	WDR61	Q9GZS3	305 aa	Known RBP	7.61	□□□□□ -1.19
SYNGAP1-223	ENST00000637671	PGPEP1L	A6NFU8	196 aa		7.6	□□□□□ -1.19
SYNGAP1-223	ENST00000637671	CCDC160	A6NGH7	325 aa		7.6	□□□□□ -1.19
SYNGAP1-223	ENST00000637671		A8MWV9	139 aa		7.6	□□□□□ -1.19
SYNGAP1-223	ENST00000637671	NHLH2	Q02577	135 aa		7.6	□□□□□ -1.19
SYNGAP1-223	ENST00000637671	ARL6IP6	Q8N6S5	226 aa		7.6	□□□□□ -1.19
SYNGAP1-223	ENST00000637671	TVP23C	Q96ET8	276 aa		7.6	□□□□□ -1.19
SYNGAP1-223	ENST00000637671	DNAJC30	Q96LL9	226 aa		7.6	□□□□□ -1.19
SYNGAP1-223	ENST00000637671	SEC22C	Q9BRL7	303 aa		7.6	□□□□□ -1.19
SYNGAP1-223	ENST00000637671	CHCHD7	Q9BUK0	85 aa		7.6	□□□□□ -1.19
SYNGAP1-223	ENST00000637671	C1orf43	Q9BWL3	253 aa		7.6	□□□□□ -1.19
SYNGAP1-223	ENST00000637671	PARL	Q9H300	379 aa		7.6	□□□□□ -1.19
SYNGAP1-223	ENST00000637671	MBD2	Q9UBB5	411 aa		7.6	□□□□□ -1.19
SYNGAP1-223	ENST00000637671	TNXB	P22105	4242 aa		7.6	□□□□□ -1.19
SYNGAP1-223	ENST00000637671	TRAV6	A0A075B6T7	132 aa		7.59	□□□□□ -1.19
SYNGAP1-223	ENST00000637671		A0A0D9SG52	128 aa		7.59	□□□□□ -1.19
SYNGAP1-223	ENST00000637671	LGALSL	Q3ZCW2	172 aa	Predicted RBP	7.59	□□□□□ -1.19
SYNGAP1-223	ENST00000637671	DMRTA1	Q5VZB9	504 aa		7.59	□□□□□ -1.19
SYNGAP1-223	ENST00000637671	ATRAID	Q6UW56	229 aa		7.59	□□□□□ -1.19
SYNGAP1-223	ENST00000637671	HSD17B11	Q8NBQ5	300 aa		7.59	□□□□□ -1.19
SYNGAP1-223	ENST00000637671	OR2T35	Q8NGX2	323 aa		7.59	□□□□□ -1.19
SYNGAP1-223	ENST00000637671	SERTM2	A0A1B0GWG4	89 aa		7.58	□□□□□ -1.2
SYNGAP1-223	ENST00000637671		K7EQM0	130 aa		7.58	□□□□□ -1.2
SYNGAP1-223	ENST00000637671	CRP	P02741	224 aa		7.58	□□□□□ -1.2
SYNGAP1-223	ENST00000637671	IL15RA	Q13261	267 aa		7.58	□□□□□ -1.2
SYNGAP1-223	ENST00000637671	ZFP69	Q49AA0	526 aa		7.58	□□□□□ -1.2
SYNGAP1-223	ENST00000637671	ZC2HC1A	Q96GY0	325 aa		7.58	□□□□□ -1.2
SYNGAP1-223	ENST00000637671	DPH3P1	Q9H4G8	78 aa		7.58	□□□□□ -1.2
SYNGAP1-223	ENST00000637671	NUDT15	Q9NV35	164 aa		7.58	□□□□□ -1.2
SYNGAP1-223	ENST00000637671	C11orf21	Q9P2W6	132 aa		7.58	□□□□□ -1.2
SYNGAP1-223	ENST00000637671	GCG	P01275	180 aa		7.57	□□□□□ -1.2
SYNGAP1-223	ENST00000637671	TCRB	P04435	133 aa		7.57	□□□□□ -1.2
SYNGAP1-223	ENST00000637671	RNASE3	P12724	160 aa	Known RBP	7.57	□□□□□ -1.2
SYNGAP1-223	ENST00000637671	IL7	P13232	177 aa		7.57	□□□□□ -1.2
SYNGAP1-223	ENST00000637671	S100A4	P26447	101 aa	Known RBP	7.57	□□□□□ -1.2
SYNGAP1-223	ENST00000637671	GNG5	P63218	68 aa		7.57	□□□□□ -1.2
SYNGAP1-223	ENST00000637671	PIK3CD-AS1	Q5SR53	167 aa		7.57	□□□□□ -1.2
SYNGAP1-223	ENST00000637671	PQLC2	Q6ZP29	291 aa		7.57	□□□□□ -1.2
SYNGAP1-223	ENST00000637671	SGK494	Q96LW2	274 aa		7.57	□□□□□ -1.2
SYNGAP1-223	ENST00000637671	LINC00479	Q96M42	142 aa		7.57	□□□□□ -1.2
SYNGAP1-223	ENST00000637671	SAMD10	Q9BYL1	202 aa		7.57	□□□□□ -1.2
SYNGAP1-223	ENST00000637671	OR5AC2	Q9NZP5	309 aa		7.57	□□□□□ -1.2
SYNGAP1-223	ENST00000637671	USP17L23	D6RBM5	183 aa		7.56	□□□□□ -1.2
SYNGAP1-223	ENST00000637671	RHOD	O00212	210 aa		7.56	□□□□□ -1.2
SYNGAP1-223	ENST00000637671	LYRM1	O43325	122 aa		7.56	□□□□□ -1.2
SYNGAP1-223	ENST00000637671	HLA-DQA1	P01909	254 aa		7.56	□□□□□ -1.2
SYNGAP1-223	ENST00000637671	ASIP	P42127	132 aa		7.56	□□□□□ -1.2
SYNGAP1-223	ENST00000637671	ZNF80	P51504	273 aa	Predicted RBP	7.56	□□□□□ -1.2
SYNGAP1-223	ENST00000637671	SMUG1	Q53HV7	270 aa		7.56	□□□□□ -1.2
SYNGAP1-223	ENST00000637671	DGAT2L7P	Q6IED9	249 aa		7.56	□□□□□ -1.2
SYNGAP1-223	ENST00000637671	C14orf178	Q8N769	122 aa	Predicted RBP	7.56	□□□□□ -1.2
SYNGAP1-223	ENST00000637671	TMEM75	Q8N9X5	138 aa		7.56	□□□□□ -1.2
SYNGAP1-223	ENST00000637671	OR2G3	Q8NGZ4	309 aa		7.56	□□□□□ -1.2
SYNGAP1-223	ENST00000637671	SCGB1C1	Q8TD33	95 aa		7.56	□□□□□ -1.2
SYNGAP1-223	ENST00000637671	SDHC	Q99643	169 aa	Predicted RBP	7.56	□□□□□ -1.2
SYNGAP1-223	ENST00000637671		A0A1W2PPV4	95 aa		7.55	□□□□□ -1.2
SYNGAP1-223	ENST00000637671	TMEM262	E9PQX1	116 aa		7.55	□□□□□ -1.2
SYNGAP1-223	ENST00000637671		Q9UF83	564 aa		7.55	□□□□□ -1.2
SYNGAP1-223	ENST00000637671	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	7.55	□□□□□ -1.2
SYNGAP1-223	ENST00000637671	EIF3G	O75821	320 aa	Known RBP eCLIP	7.54	□□□□□ -1.2
SYNGAP1-223	ENST00000637671	H2AFB2	P0C5Z0	115 aa		7.54	□□□□□ -1.2
SYNGAP1-223	ENST00000637671	LRRC37A5P	Q49AS3	106 aa		7.54	□□□□□ -1.2
SYNGAP1-223	ENST00000637671	C9orf163	Q8N9P6	203 aa		7.54	□□□□□ -1.2
SYNGAP1-223	ENST00000637671	C5orf17	Q8NAS9	161 aa		7.54	□□□□□ -1.2
SYNGAP1-223	ENST00000637671	OR10G7	Q8NGN6	311 aa		7.54	□□□□□ -1.2
SYNGAP1-223	ENST00000637671	PSG8	Q9UQ74	426 aa		7.54	□□□□□ -1.2
SYNGAP1-223	ENST00000637671	PLA2G10	O15496	165 aa		7.53	□□□□□ -1.2
SYNGAP1-223	ENST00000637671	TCRA	P04437	139 aa		7.53	□□□□□ -1.2
SYNGAP1-223	ENST00000637671	PRSS1	P07477	247 aa		7.53	□□□□□ -1.2
SYNGAP1-223	ENST00000637671	RPL19	P84098	196 aa	Known RBP	7.53	□□□□□ -1.2
SYNGAP1-223	ENST00000637671	FAM74A4	Q5TZK3	123 aa		7.53	□□□□□ -1.2
SYNGAP1-223	ENST00000637671	UFSP1	Q6NVU6	142 aa		7.53	□□□□□ -1.2
SYNGAP1-223	ENST00000637671	PRNT	Q86SH4	94 aa		7.53	□□□□□ -1.2
SYNGAP1-223	ENST00000637671	C15orf54	Q8N8G6	183 aa		7.53	□□□□□ -1.2
SYNGAP1-223	ENST00000637671	ANG	P03950	147 aa	Known RBP	7.52	□□□□□ -1.21
SYNGAP1-223	ENST00000637671	PKIA	P61925	76 aa		7.52	□□□□□ -1.21
SYNGAP1-223	ENST00000637671	RPL36A	P83881	106 aa	Known RBP	7.52	□□□□□ -1.21
SYNGAP1-223	ENST00000637671	FLI1	Q01543	452 aa	Predicted RBP	7.52	□□□□□ -1.21
SYNGAP1-223	ENST00000637671	SAPCD1	Q5SSQ6	148 aa		7.52	□□□□□ -1.21
SYNGAP1-223	ENST00000637671	ENHO	Q6UWT2	76 aa		7.52	□□□□□ -1.21
SYNGAP1-223	ENST00000637671	RPL36AL	Q969Q0	106 aa	Known RBP	7.52	□□□□□ -1.21
SYNGAP1-223	ENST00000637671	DPH3	Q96FX2	82 aa		7.52	□□□□□ -1.21
SYNGAP1-223	ENST00000637671	JPT2	Q9H910	190 aa		7.52	□□□□□ -1.21
SYNGAP1-223	ENST00000637671	IL36B	Q9NZH7	164 aa		7.52	□□□□□ -1.21
SYNGAP1-223	ENST00000637671	TRBV10-1	A0A0K0K1A3	114 aa		7.51	□□□□□ -1.21
SYNGAP1-223	ENST00000637671	MIA	Q16674	131 aa		7.51	□□□□□ -1.21
SYNGAP1-223	ENST00000637671	OR11H4	Q8NGC9	324 aa		7.51	□□□□□ -1.21
SYNGAP1-223	ENST00000637671	IGKV3D-20	A0A0C4DH25	116 aa		7.5	□□□□□ -1.21
SYNGAP1-223	ENST00000637671		H3BVH4	76 aa		7.5	□□□□□ -1.21
SYNGAP1-223	ENST00000637671	PANO1	I0J062	215 aa		7.5	□□□□□ -1.21
SYNGAP1-223	ENST00000637671	ARL14EPL	P0DKL9	152 aa		7.5	□□□□□ -1.21
SYNGAP1-223	ENST00000637671	CYCS	P99999	105 aa	Known RBP	7.5	□□□□□ -1.21
SYNGAP1-223	ENST00000637671	SDIM1	Q6ZPB5	146 aa		7.5	□□□□□ -1.21
SYNGAP1-223	ENST00000637671	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	7.5	□□□□□ -1.21
SYNGAP1-223	ENST00000637671	HSPB11	Q9Y547	144 aa		7.5	□□□□□ -1.21
SYNGAP1-223	ENST00000637671	TRBV7-3	A0A075B6L6	115 aa		7.49	□□□□□ -1.21
SYNGAP1-223	ENST00000637671		A0A087WWL8	130 aa		7.49	□□□□□ -1.21
SYNGAP1-223	ENST00000637671	TRBV6-8	A0A0A6YYG3	113 aa		7.49	□□□□□ -1.21

Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms