RNA–Protein interactions for RNA: ENST00000637616.1

CACNA1A-243, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-243ENST00000637616 TMEM219Q86XT9 240 aa15.32■□□□□ 0.04
CACNA1A-243ENST00000637616 TSPAN13O95857 204 aa15.32■□□□□ 0.04
CACNA1A-243ENST00000637616 FHL3Q13643 280 aa15.32■□□□□ 0.04
CACNA1A-243ENST00000637616 ANXA2RQ3ZCQ2 193 aa15.32■□□□□ 0.04
CACNA1A-243ENST00000637616 RNF223E7ERA6 249 aa15.32■□□□□ 0.04
CACNA1A-243ENST00000637616 CFAP126Q5VTH2 177 aa15.32■□□□□ 0.04
CACNA1A-243ENST00000637616 COL6A6A6NMZ7 2263 aa15.31■□□□□ 0.04
CACNA1A-243ENST00000637616 CCL21O00585 134 aa15.31■□□□□ 0.04
CACNA1A-243ENST00000637616 RNASE4P34096 147 aaKnown RBP15.31■□□□□ 0.04
CACNA1A-243ENST00000637616 ARL3P36405 182 aa15.31■□□□□ 0.04
CACNA1A-243ENST00000637616 RPL11P62913 178 aaKnown RBP15.31■□□□□ 0.04
CACNA1A-243ENST00000637616 PTPRQQ9UMZ3 2332 aa15.3■□□□□ 0.04
CACNA1A-243ENST00000637616 EEF1AKMT3Q96AZ1 226 aa15.3■□□□□ 0.04
CACNA1A-243ENST00000637616 DLX4Q92988 240 aaPredicted RBP15.3■□□□□ 0.04
CACNA1A-243ENST00000637616 TRBV12-3P01733 135 aa15.3■□□□□ 0.04
CACNA1A-243ENST00000637616 UNQ9165/PRO28630Q6UXU0 137 aa15.3■□□□□ 0.04
CACNA1A-243ENST00000637616 ZFAND2AQ8N6M9 145 aa15.3■□□□□ 0.04
CACNA1A-243ENST00000637616 DPH3P1Q9H4G8 78 aa15.3■□□□□ 0.04
CACNA1A-243ENST00000637616 SPTAN1Q13813 2472 aaKnown RBP15.29■□□□□ 0.04
CACNA1A-243ENST00000637616 IGHV3OR16-10A0A075B7F0 116 aa15.29■□□□□ 0.04
CACNA1A-243ENST00000637616 SAA4P35542 130 aa15.29■□□□□ 0.04
CACNA1A-243ENST00000637616 C1QTNF4Q9BXJ3 329 aa15.29■□□□□ 0.04
CACNA1A-243ENST00000637616 CDIP1Q9H305 208 aa15.29■□□□□ 0.04
CACNA1A-243ENST00000637616 JPT2Q9H910 190 aa15.29■□□□□ 0.04
CACNA1A-243ENST00000637616 C11orf86A6NJI1 115 aa15.29■□□□□ 0.04
CACNA1A-243ENST00000637616 MT-ATP8P03928 68 aa15.29■□□□□ 0.04
CACNA1A-243ENST00000637616 CRYGDP07320 174 aa15.29■□□□□ 0.04
CACNA1A-243ENST00000637616 Q6ZS46 218 aa15.28■□□□□ 0.04
CACNA1A-243ENST00000637616 AJUBAQ96IF1 538 aa15.28■□□□□ 0.04
CACNA1A-243ENST00000637616 RPL39P62891 51 aaKnown RBP15.28■□□□□ 0.04
CACNA1A-243ENST00000637616 MINOS1Q5TGZ0 78 aa15.28■□□□□ 0.04
CACNA1A-243ENST00000637616 MINOS1-NBL1R4GNA1 71 aa15.28■□□□□ 0.04
CACNA1A-243ENST00000637616 COX6B1P14854 86 aa15.27■□□□□ 0.04
CACNA1A-243ENST00000637616 ASIPP42127 132 aa15.27■□□□□ 0.04
CACNA1A-243ENST00000637616 TSHBP01222 138 aa15.27■□□□□ 0.03
CACNA1A-243ENST00000637616 TRAV26-1A0A087WT03 109 aa15.26■□□□□ 0.03
CACNA1A-243ENST00000637616 SPINK8P0C7L1 97 aa15.26■□□□□ 0.03
CACNA1A-243ENST00000637616 GPHB5Q86YW7 130 aa15.26■□□□□ 0.03
CACNA1A-243ENST00000637616 SRD5A1P18405 259 aa15.26■□□□□ 0.03
CACNA1A-243ENST00000637616 UBE2D1P51668 147 aa15.26■□□□□ 0.03
CACNA1A-243ENST00000637616 SIRPDQ9H106 197 aa15.26■□□□□ 0.03
CACNA1A-243ENST00000637616 TP53TG1Q9Y2A0 90 aa15.26■□□□□ 0.03
CACNA1A-243ENST00000637616 OOSP1A8MZH6 123 aa15.25■□□□□ 0.03
CACNA1A-243ENST00000637616 LINC01619G3V211 115 aa15.25■□□□□ 0.03
CACNA1A-243ENST00000637616 TCF15Q12870 199 aa15.25■□□□□ 0.03
CACNA1A-243ENST00000637616 TRAV21A0A0B4J279 112 aa15.25■□□□□ 0.03
CACNA1A-243ENST00000637616 TCL1BO95988 128 aa15.25■□□□□ 0.03
CACNA1A-243ENST00000637616 CD7P09564 240 aa15.25■□□□□ 0.03
CACNA1A-243ENST00000637616 TSPEAR-AS2P59090 65 aa15.25■□□□□ 0.03
CACNA1A-243ENST00000637616 OR10J6PQ8NGY7 276 aa15.25■□□□□ 0.03
CACNA1A-243ENST00000637616 ITLN2Q8WWU7 325 aaPredicted RBP15.25■□□□□ 0.03
CACNA1A-243ENST00000637616 CARD19Q96LW7 228 aa15.25■□□□□ 0.03
CACNA1A-243ENST00000637616 U3KQE9 123 aa15.25■□□□□ 0.03
CACNA1A-243ENST00000637616 MUC4Q99102 2169 aa15.24■□□□□ 0.03
CACNA1A-243ENST00000637616 A6NJY4 79 aa15.24■□□□□ 0.03
CACNA1A-243ENST00000637616 XGP55808 180 aa15.24■□□□□ 0.03
CACNA1A-243ENST00000637616 CFAP161Q6P656 301 aa15.24■□□□□ 0.03
CACNA1A-243ENST00000637616 MRPL53Q96EL3 112 aaKnown RBP15.24■□□□□ 0.03
CACNA1A-243ENST00000637616 A0A087WWL8 130 aa15.24■□□□□ 0.03
CACNA1A-243ENST00000637616 IGLV4-69A0A075B6H9 119 aa15.23■□□□□ 0.03
CACNA1A-243ENST00000637616 TRBV7-1A0A0A6YYK4 115 aa15.23■□□□□ 0.03
CACNA1A-243ENST00000637616 IGHV3-11P01762 117 aa15.23■□□□□ 0.03
CACNA1A-243ENST00000637616 RNASE3P12724 160 aaKnown RBP15.23■□□□□ 0.03
CACNA1A-243ENST00000637616 TMEM170BQ5T4T1 132 aa15.23■□□□□ 0.03
CACNA1A-243ENST00000637616 NDUFA11Q86Y39 141 aa15.23■□□□□ 0.03
CACNA1A-243ENST00000637616 GEMIN7Q9H840 131 aaKnown RBP15.23■□□□□ 0.03
CACNA1A-243ENST00000637616 KIR2DL4Q99706 377 aa15.23■□□□□ 0.03
CACNA1A-243ENST00000637616 A0A0J9YY99 117 aa15.23■□□□□ 0.03
CACNA1A-243ENST00000637616 C1orf122Q6ZSJ8 110 aa15.23■□□□□ 0.03
CACNA1A-243ENST00000637616 IGF2RP11717 2491 aa15.21■□□□□ 0.03
CACNA1A-243ENST00000637616 CENPVL3A0A0U1RRI6 287 aa15.21■□□□□ 0.03
CACNA1A-243ENST00000637616 F5H697 171 aa15.21■□□□□ 0.03
CACNA1A-243ENST00000637616 C11orf71Q6IPW1 123 aa15.21■□□□□ 0.03
CACNA1A-243ENST00000637616 C9orf139Q6ZV77 190 aa15.21■□□□□ 0.03
CACNA1A-243ENST00000637616 A0A1W2PPR1 153 aa15.21■□□□□ 0.03
CACNA1A-243ENST00000637616 RAX2Q96IS3 184 aa15.21■□□□□ 0.03
CACNA1A-243ENST00000637616 LINC00477Q96M19 166 aa15.21■□□□□ 0.03
CACNA1A-243ENST00000637616 OPRPNQ99935 248 aaPredicted RBP15.21■□□□□ 0.03
CACNA1A-243ENST00000637616 H7C2G1 150 aa15.2■□□□□ 0.02
CACNA1A-243ENST00000637616 CFC1BP0CG36 223 aa15.2■□□□□ 0.02
CACNA1A-243ENST00000637616 CFC1P0CG37 223 aa15.2■□□□□ 0.02
CACNA1A-243ENST00000637616 SCGB1C2P0DMR2 95 aa15.2■□□□□ 0.02
CACNA1A-243ENST00000637616 UBE2D3P61077 147 aa15.2■□□□□ 0.02
CACNA1A-243ENST00000637616 UBE2D2P62837 147 aa15.2■□□□□ 0.02
CACNA1A-243ENST00000637616 IGHV3-64A0A075B6Q5 118 aa15.2■□□□□ 0.02
CACNA1A-243ENST00000637616 CRYBA4P53673 196 aa15.2■□□□□ 0.02
CACNA1A-243ENST00000637616 UBE2E1P51965 193 aa15.19■□□□□ 0.02
CACNA1A-243ENST00000637616 Q6ZUT4 128 aa15.19■□□□□ 0.02
CACNA1A-243ENST00000637616 C5orf56Q8N8D9 126 aa15.19■□□□□ 0.02
CACNA1A-243ENST00000637616 ZNRF2Q8NHG8 242 aa15.19■□□□□ 0.02
CACNA1A-243ENST00000637616 TCTEX1D4Q5JR98 221 aa15.18■□□□□ 0.02
CACNA1A-243ENST00000637616 TRAV41A0A0B4J266 112 aa15.18■□□□□ 0.02
CACNA1A-243ENST00000637616 EDN2P20800 178 aa15.18■□□□□ 0.02
CACNA1A-243ENST00000637616 FAM74A4Q5TZK3 123 aa15.18■□□□□ 0.02
CACNA1A-243ENST00000637616 IGIPA6NJ69 53 aa15.17■□□□□ 0.02
CACNA1A-243ENST00000637616 ZNF256Q9Y2P7 627 aaPredicted RBP15.17■□□□□ 0.02
CACNA1A-243ENST00000637616 IGHV3-30P01768 117 aa15.17■□□□□ 0.02
CACNA1A-243ENST00000637616 IGHV3-30-5P0DP03 117 aa15.17■□□□□ 0.02
CACNA1A-243ENST00000637616 LINC00315P59091 139 aa15.17■□□□□ 0.02
CACNA1A-243ENST00000637616 ADORA2A-AS1P86434 159 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms