RNA–Protein interactions for RNA: ENST00000637397.1

CLN5-218, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 5,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-218ENST00000637397 ZNF493Q6ZR52 646 aa12.36□□□□□ -0.43
CLN5-218ENST00000637397 ATP6V0BQ99437 205 aa12.36□□□□□ -0.43
CLN5-218ENST00000637397 MLST8Q9BVC4 326 aa12.36□□□□□ -0.43
CLN5-218ENST00000637397 WFDC2Q14508 124 aa12.35□□□□□ -0.43
CLN5-218ENST00000637397 NPBQ8NG41 125 aa12.35□□□□□ -0.43
CLN5-218ENST00000637397 CUL9Q8IWT3 2517 aa12.35□□□□□ -0.43
CLN5-218ENST00000637397 NDUFA12Q9UI09 145 aa12.35□□□□□ -0.43
CLN5-218ENST00000637397 WI2-2373I1.2A0A1W2PRP0 233 aa12.35□□□□□ -0.43
CLN5-218ENST00000637397 SLC25A20O43772 301 aa12.35□□□□□ -0.43
CLN5-218ENST00000637397 EML5Q05BV3 1969 aa12.34□□□□□ -0.43
CLN5-218ENST00000637397 H3BMM0 161 aa12.34□□□□□ -0.43
CLN5-218ENST00000637397 HOXB4P17483 251 aaPredicted RBP12.34□□□□□ -0.43
CLN5-218ENST00000637397 PTPN13Q12923 2485 aa12.34□□□□□ -0.43
CLN5-218ENST00000637397 UBE2WQ96B02 151 aa12.34□□□□□ -0.43
CLN5-218ENST00000637397 FOXI2Q6ZQN5 318 aa12.34□□□□□ -0.43
CLN5-218ENST00000637397 SPATA12Q7Z6I5 190 aa12.34□□□□□ -0.43
CLN5-218ENST00000637397 KLHL30-AS1Q8NEE0 82 aa12.34□□□□□ -0.43
CLN5-218ENST00000637397 MSMBP08118 114 aa12.34□□□□□ -0.43
CLN5-218ENST00000637397 TMEM86BQ8N661 226 aa12.34□□□□□ -0.43
CLN5-218ENST00000637397 IGHV3-38A0A0C4DH36 116 aa12.33□□□□□ -0.44
CLN5-218ENST00000637397 MALP21145 153 aa12.33□□□□□ -0.44
CLN5-218ENST00000637397 INSP01308 110 aa12.33□□□□□ -0.44
CLN5-218ENST00000637397 RNASE13Q5GAN3 156 aaKnown RBP12.33□□□□□ -0.44
CLN5-218ENST00000637397 IGHV7-4-1A0A0J9YVY3 117 aa12.33□□□□□ -0.44
CLN5-218ENST00000637397 OTOGLQ3ZCN5 2332 aa12.33□□□□□ -0.44
CLN5-218ENST00000637397 LENEPQ9Y5L5 61 aa12.33□□□□□ -0.44
CLN5-218ENST00000637397 XCL2Q9UBD3 114 aa12.32□□□□□ -0.44
CLN5-218ENST00000637397 ODF1Q14990 250 aa12.32□□□□□ -0.44
CLN5-218ENST00000637397 MRPL53Q96EL3 112 aaKnown RBP12.32□□□□□ -0.44
CLN5-218ENST00000637397 CENPVL3A0A0U1RRI6 287 aa12.31□□□□□ -0.44
CLN5-218ENST00000637397 C10orf142B7Z368 130 aa12.31□□□□□ -0.44
CLN5-218ENST00000637397 LEPROTO15243 131 aa12.31□□□□□ -0.44
CLN5-218ENST00000637397 MAPK1IP1LQ8NDC0 245 aa12.31□□□□□ -0.44
CLN5-218ENST00000637397 LINC00574Q9H8X3 128 aa12.31□□□□□ -0.44
CLN5-218ENST00000637397 Q8N7P7 452 aa12.31□□□□□ -0.44
CLN5-218ENST00000637397 DSCR9P59020 149 aa12.31□□□□□ -0.44
CLN5-218ENST00000637397 C22orf34Q6ZV56 151 aa12.31□□□□□ -0.44
CLN5-218ENST00000637397 HIGD1BQ9P298 99 aa12.31□□□□□ -0.44
CLN5-218ENST00000637397 NTN5Q8WTR8 489 aaPredicted RBP12.3□□□□□ -0.44
CLN5-218ENST00000637397 FANCD2OSQ96PS1 177 aa12.3□□□□□ -0.44
CLN5-218ENST00000637397 Q8N9W7 124 aa12.3□□□□□ -0.44
CLN5-218ENST00000637397 RHODO00212 210 aa12.3□□□□□ -0.44
CLN5-218ENST00000637397 TRBV6-1A0A0K0K1D8 114 aa12.29□□□□□ -0.44
CLN5-218ENST00000637397 C6orf226Q5I0X4 101 aa12.29□□□□□ -0.44
CLN5-218ENST00000637397 TCTEX1D4Q5JR98 221 aa12.29□□□□□ -0.44
CLN5-218ENST00000637397 GAGE2AQ6NT46 116 aa12.29□□□□□ -0.44
CLN5-218ENST00000637397 NOTCH2Q04721 2471 aa12.29□□□□□ -0.44
CLN5-218ENST00000637397 RPL35AP18077 110 aaKnown RBP12.29□□□□□ -0.44
CLN5-218ENST00000637397 ZNF80P51504 273 aaPredicted RBP12.29□□□□□ -0.44
CLN5-218ENST00000637397 CFC1BP0CG36 223 aa12.29□□□□□ -0.44
CLN5-218ENST00000637397 CFC1P0CG37 223 aa12.29□□□□□ -0.44
CLN5-218ENST00000637397 VWC2LB2RUY7 222 aa12.28□□□□□ -0.44
CLN5-218ENST00000637397 DEFB1P60022 68 aa12.28□□□□□ -0.44
CLN5-218ENST00000637397 LGALS1P09382 135 aaKnown RBP12.28□□□□□ -0.44
CLN5-218ENST00000637397 HIST1H4AP62805 103 aaKnown RBP12.28□□□□□ -0.44
CLN5-218ENST00000637397 LINC00310P59036 64 aa12.28□□□□□ -0.44
CLN5-218ENST00000637397 ATRXP46100 2492 aa12.27□□□□□ -0.44
CLN5-218ENST00000637397 GAGE12JA6NER3 117 aa12.27□□□□□ -0.44
CLN5-218ENST00000637397 GAGE4Q13068 117 aa12.27□□□□□ -0.44
CLN5-218ENST00000637397 GAGE5Q13069 117 aa12.27□□□□□ -0.44
CLN5-218ENST00000637397 ZNRF2Q8NHG8 242 aa12.27□□□□□ -0.44
CLN5-218ENST00000637397 ATG2AQ2TAZ0 1938 aa12.27□□□□□ -0.45
CLN5-218ENST00000637397 C1QTNF4Q9BXJ3 329 aa12.27□□□□□ -0.45
CLN5-218ENST00000637397 TLN1Q9Y490 2541 aaKnown RBP12.26□□□□□ -0.45
CLN5-218ENST00000637397 S100A7L2Q5SY68 101 aa12.26□□□□□ -0.45
CLN5-218ENST00000637397 LINC01356Q8N9X3 169 aa12.26□□□□□ -0.45
CLN5-218ENST00000637397 G3V4G9 280 aa12.25□□□□□ -0.45
CLN5-218ENST00000637397 RPL39P62891 51 aaKnown RBP12.25□□□□□ -0.45
CLN5-218ENST00000637397 NSUN5P1Q3KNT7 163 aa12.25□□□□□ -0.45
CLN5-218ENST00000637397 SUMO4Q6EEV6 95 aa12.25□□□□□ -0.45
CLN5-218ENST00000637397 ZFP2Q6ZN57 461 aa12.25□□□□□ -0.45
CLN5-218ENST00000637397 CARD19Q96LW7 228 aa12.25□□□□□ -0.45
CLN5-218ENST00000637397 SORL1Q92673 2214 aa12.24□□□□□ -0.45
CLN5-218ENST00000637397 CFHR3Q02985 330 aa12.24□□□□□ -0.45
CLN5-218ENST00000637397 JPT2Q9H910 190 aa12.24□□□□□ -0.45
CLN5-218ENST00000637397 EDA2RQ9HAV5 297 aa12.24□□□□□ -0.45
CLN5-218ENST00000637397 A0A0J9YXV3 536 aa12.24□□□□□ -0.45
CLN5-218ENST00000637397 BLCAPP62952 87 aa12.24□□□□□ -0.45
CLN5-218ENST00000637397 C16orf54Q6UWD8 224 aa12.24□□□□□ -0.45
CLN5-218ENST00000637397 A4D1N5 150 aa12.24□□□□□ -0.45
CLN5-218ENST00000637397 RHOHQ15669 191 aa12.23□□□□□ -0.45
CLN5-218ENST00000637397 C9orf47Q6ZRZ4 202 aa12.23□□□□□ -0.45
CLN5-218ENST00000637397 BAALCQ8WXS3 180 aa12.23□□□□□ -0.45
CLN5-218ENST00000637397 RNF223E7ERA6 249 aa12.22□□□□□ -0.45
CLN5-218ENST00000637397 DEFB130BP0DP73 79 aa12.22□□□□□ -0.45
CLN5-218ENST00000637397 DEFB130AP0DP74 79 aa12.22□□□□□ -0.45
CLN5-218ENST00000637397 PFN2P35080 140 aa12.22□□□□□ -0.45
CLN5-218ENST00000637397 MYCNOSP40205 109 aa12.22□□□□□ -0.45
CLN5-218ENST00000637397 IFITM1P13164 125 aa12.22□□□□□ -0.45
CLN5-218ENST00000637397 TRAV12-1A0A0B4J245 112 aa12.22□□□□□ -0.45
CLN5-218ENST00000637397 CRIP1P50238 77 aa12.22□□□□□ -0.45
CLN5-218ENST00000637397 AJUBAQ96IF1 538 aa12.22□□□□□ -0.45
CLN5-218ENST00000637397 ZFP36P26651 326 aaKnown RBP12.22□□□□□ -0.45
CLN5-218ENST00000637397 E9PLD3 99 aa12.21□□□□□ -0.45
CLN5-218ENST00000637397 MYO9AB2RTY4 2548 aa12.21□□□□□ -0.45
CLN5-218ENST00000637397 RBX1P62877 108 aa12.21□□□□□ -0.45
CLN5-218ENST00000637397 C15orf53Q8NAA6 179 aa12.21□□□□□ -0.45
CLN5-218ENST00000637397 GATA3P23771 443 aa12.21□□□□□ -0.46
CLN5-218ENST00000637397 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.2□□□□□ -0.46
CLN5-218ENST00000637397 IGKV2-29A2NJV5 120 aaPredicted RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms