RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 RNASE3P12724 160 aaKnown RBP9.46□□□□□ -0.9
PNKP-228ENST00000637325 TPT1P13693 172 aaKnown RBP9.46□□□□□ -0.9
PNKP-228ENST00000637325 GATA1P15976 413 aaPredicted RBP9.46□□□□□ -0.9
PNKP-228ENST00000637325 BTF3P20290 206 aaKnown RBP9.46□□□□□ -0.9
PNKP-228ENST00000637325 LGALSLQ3ZCW2 172 aaPredicted RBP9.46□□□□□ -0.9
PNKP-228ENST00000637325 ZNF506Q5JVG8 444 aa9.46□□□□□ -0.9
PNKP-228ENST00000637325 CFAP126Q5VTH2 177 aa9.46□□□□□ -0.9
PNKP-228ENST00000637325 PTH2Q96A98 100 aa9.46□□□□□ -0.9
PNKP-228ENST00000637325 PRADC1Q9BSG0 188 aa9.46□□□□□ -0.9
PNKP-228ENST00000637325 TRAV9-2A0A087WT02 112 aa9.45□□□□□ -0.9
PNKP-228ENST00000637325 LOC100131303A0A0U1RQF7 123 aa9.45□□□□□ -0.9
PNKP-228ENST00000637325 H2AFB1P0C5Y9 115 aa9.45□□□□□ -0.9
PNKP-228ENST00000637325 FAM162BQ5T6X4 162 aa9.45□□□□□ -0.9
PNKP-228ENST00000637325 ZC2HC1AQ96GY0 325 aa9.45□□□□□ -0.9
PNKP-228ENST00000637325 TRBV6-1A0A0K0K1D8 114 aa9.44□□□□□ -0.9
PNKP-228ENST00000637325 M0R036 132 aa9.44□□□□□ -0.9
PNKP-228ENST00000637325 SH2D1AO60880 128 aa9.44□□□□□ -0.9
PNKP-228ENST00000637325 MED14OSP0DP75 135 aa9.44□□□□□ -0.9
PNKP-228ENST00000637325 RHOHQ15669 191 aa9.44□□□□□ -0.9
PNKP-228ENST00000637325 ZNF575Q86XF7 245 aa9.44□□□□□ -0.9
PNKP-228ENST00000637325 SLC25A29Q8N8R3 303 aa9.44□□□□□ -0.9
PNKP-228ENST00000637325 LY96Q9Y6Y9 160 aa9.44□□□□□ -0.9
PNKP-228ENST00000637325 HERC2O95714 4834 aa9.44□□□□□ -0.9
PNKP-228ENST00000637325 KIAA1109Q2LD37 5005 aa9.43□□□□□ -0.9
PNKP-228ENST00000637325 A8MWV9 139 aa9.43□□□□□ -0.9
PNKP-228ENST00000637325 C16orf90A8MZG2 172 aa9.43□□□□□ -0.9
PNKP-228ENST00000637325 KRBOX1C9JBD0 128 aa9.43□□□□□ -0.9
PNKP-228ENST00000637325 H3BVH4 76 aa9.43□□□□□ -0.9
PNKP-228ENST00000637325 LTAP01374 205 aa9.43□□□□□ -0.9
PNKP-228ENST00000637325 S100A9P06702 114 aaKnown RBP9.43□□□□□ -0.9
PNKP-228ENST00000637325 EVI2AP22794 236 aa9.43□□□□□ -0.9
PNKP-228ENST00000637325 CRIP1P50238 77 aa9.43□□□□□ -0.9
PNKP-228ENST00000637325 LINC00315P59091 139 aa9.43□□□□□ -0.9
PNKP-228ENST00000637325 EIF5AL1Q6IS14 154 aaKnown RBP9.43□□□□□ -0.9
PNKP-228ENST00000637325 COX8CQ7Z4L0 72 aa9.43□□□□□ -0.9
PNKP-228ENST00000637325 SYT8Q8NBV8 401 aa9.43□□□□□ -0.9
PNKP-228ENST00000637325 IL36BQ9NZH7 164 aa9.43□□□□□ -0.9
PNKP-228ENST00000637325 TRBV6-4A0A1B0GX49 114 aa9.42□□□□□ -0.9
PNKP-228ENST00000637325 GRIFINA4D1Z8 144 aa9.42□□□□□ -0.9
PNKP-228ENST00000637325 MGST1P10620 155 aaKnown RBP9.42□□□□□ -0.9
PNKP-228ENST00000637325 WFDC10BQ8IUB3 73 aa9.42□□□□□ -0.9
PNKP-228ENST00000637325 TMSB15BA0A087X1C1 80 aa9.41□□□□□ -0.9
PNKP-228ENST00000637325 SCO2A0A1W2PP80 73 aa9.41□□□□□ -0.9
PNKP-228ENST00000637325 TEX46H3BTG2 121 aa9.41□□□□□ -0.9
PNKP-228ENST00000637325 ARMS2P0C7Q2 107 aa9.41□□□□□ -0.9
PNKP-228ENST00000637325 RAB5CP51148 216 aa9.41□□□□□ -0.9
PNKP-228ENST00000637325 ZNF674Q2M3X9 581 aa9.41□□□□□ -0.9
PNKP-228ENST00000637325 PIK3CD-AS1Q5SR53 167 aa9.41□□□□□ -0.9
PNKP-228ENST00000637325 TCTE3Q8IZS6 198 aa9.41□□□□□ -0.9
PNKP-228ENST00000637325 PARLQ9H300 379 aa9.41□□□□□ -0.9
PNKP-228ENST00000637325 PHLDA3Q9Y5J5 127 aa9.41□□□□□ -0.9
PNKP-228ENST00000637325 TRAV8-6A0A0B4J262 113 aa9.4□□□□□ -0.9
PNKP-228ENST00000637325 TIRAPP58753 221 aa9.4□□□□□ -0.9
PNKP-228ENST00000637325 LINC01559Q495D7 138 aa9.4□□□□□ -0.9
PNKP-228ENST00000637325 DNLZQ5SXM8 178 aa9.4□□□□□ -0.9
PNKP-228ENST00000637325 DMRTA1Q5VZB9 504 aa9.4□□□□□ -0.9
PNKP-228ENST00000637325 ZFP2Q6ZN57 461 aa9.4□□□□□ -0.9
PNKP-228ENST00000637325 SPATA12Q7Z6I5 190 aa9.4□□□□□ -0.9
PNKP-228ENST00000637325 NFE4Q86UQ8 179 aa9.4□□□□□ -0.9
PNKP-228ENST00000637325 BAGE2Q86Y30 109 aa9.4□□□□□ -0.9
PNKP-228ENST00000637325 GNG13Q9P2W3 67 aa9.4□□□□□ -0.9
PNKP-228ENST00000637325 K7EP13 123 aa9.39□□□□□ -0.91
PNKP-228ENST00000637325 DNAH10OSP0CZ25 163 aa9.39□□□□□ -0.91
PNKP-228ENST00000637325 OR10J3Q5JRS4 329 aa9.39□□□□□ -0.91
PNKP-228ENST00000637325 C10orf126Q8N4M7 172 aa9.39□□□□□ -0.91
PNKP-228ENST00000637325 ATP6V0E2Q8NHE4 81 aa9.39□□□□□ -0.91
PNKP-228ENST00000637325 JPT2Q9H910 190 aa9.39□□□□□ -0.91
PNKP-228ENST00000637325 MANBALQ9NQG1 85 aa9.39□□□□□ -0.91
PNKP-228ENST00000637325 TNFRSF18Q9Y5U5 241 aa9.39□□□□□ -0.91
PNKP-228ENST00000637325 IGHV3-38A0A0C4DH36 116 aa9.38□□□□□ -0.91
PNKP-228ENST00000637325 M0R381 172 aa9.38□□□□□ -0.91
PNKP-228ENST00000637325 RHODO00212 210 aa9.38□□□□□ -0.91
PNKP-228ENST00000637325 EREGO14944 169 aa9.38□□□□□ -0.91
PNKP-228ENST00000637325 CRYGDP07320 174 aa9.38□□□□□ -0.91
PNKP-228ENST00000637325 MSRB1Q9NZV6 116 aa9.38□□□□□ -0.91
PNKP-228ENST00000637325 BOLA1Q9Y3E2 137 aa9.38□□□□□ -0.91
PNKP-228ENST00000637325 GAGE12JA6NER3 117 aa9.37□□□□□ -0.91
PNKP-228ENST00000637325 C1QBP02746 253 aa9.37□□□□□ -0.91
PNKP-228ENST00000637325 SULT1A2P50226 295 aa9.37□□□□□ -0.91
PNKP-228ENST00000637325 CCL20P78556 96 aa9.37□□□□□ -0.91
PNKP-228ENST00000637325 GAGE1Q13065 139 aa9.37□□□□□ -0.91
PNKP-228ENST00000637325 GAGE4Q13068 117 aa9.37□□□□□ -0.91
PNKP-228ENST00000637325 GAGE5Q13069 117 aa9.37□□□□□ -0.91
PNKP-228ENST00000637325 GAGE13Q4V321 117 aa9.37□□□□□ -0.91
PNKP-228ENST00000637325 FAM74A4Q5TZK3 123 aa9.37□□□□□ -0.91
PNKP-228ENST00000637325 Q6ZNX1 250 aa9.37□□□□□ -0.91
PNKP-228ENST00000637325 Q6ZRN7 208 aaPredicted RBP9.37□□□□□ -0.91
PNKP-228ENST00000637325 Q6ZSN1 163 aa9.37□□□□□ -0.91
PNKP-228ENST00000637325 SLC51BQ86UW2 128 aa9.37□□□□□ -0.91
PNKP-228ENST00000637325 ZFP82Q8N141 532 aa9.37□□□□□ -0.91
PNKP-228ENST00000637325 SAMD10Q9BYL1 202 aa9.37□□□□□ -0.91
PNKP-228ENST00000637325 GTSF1LQ9H1H1 148 aa9.37□□□□□ -0.91
PNKP-228ENST00000637325 TRAV1-1A0A0B4J248 108 aa9.36□□□□□ -0.91
PNKP-228ENST00000637325 ERVFC1-1P60608 527 aa9.36□□□□□ -0.91
PNKP-228ENST00000637325 LELP1Q5T871 98 aa9.36□□□□□ -0.91
PNKP-228ENST00000637325 PRR27Q6MZM9 219 aa9.36□□□□□ -0.91
PNKP-228ENST00000637325 SCRT2Q9NQ03 307 aa9.36□□□□□ -0.91
PNKP-228ENST00000637325 LRP1BQ9NZR2 4599 aa9.36□□□□□ -0.91
PNKP-228ENST00000637325 hCG_2014768A0A024R1R8 64 aa9.35□□□□□ -0.91
PNKP-228ENST00000637325 A0A087WWL8 130 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms