RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 ARID1AO14497 2285 aa2.03□□□□□ -2.08
VIM-210ENST00000637053 ZFC3H1O60293 1989 aaKnown RBP2.03□□□□□ -2.08
VIM-210ENST00000637053 SCN8AQ9UQD0 1980 aa2.03□□□□□ -2.08
VIM-210ENST00000637053 DOCK2Q92608 1830 aa2.03□□□□□ -2.09
VIM-210ENST00000637053 ATAD5Q96QE3 1844 aa2.03□□□□□ -2.09
VIM-210ENST00000637053 RGPD1P0DJD0 1748 aa2.03□□□□□ -2.09
VIM-210ENST00000637053 XRN1Q8IZH2 1706 aaKnown RBP2.03□□□□□ -2.09
VIM-210ENST00000637053 GPATCH8Q9UKJ3 1502 aaKnown RBP2.02□□□□□ -2.09
VIM-210ENST00000637053 PTPRMP28827 1452 aa2.02□□□□□ -2.09
VIM-210ENST00000637053 TRPM6Q9BX84 2022 aa2.02□□□□□ -2.09
VIM-210ENST00000637053 IGLV11-55A0A075B6I3 123 aa2.02□□□□□ -2.09
VIM-210ENST00000637053 A0A087WYN8 130 aa2.02□□□□□ -2.09
VIM-210ENST00000637053 IGHV3-15A0A0B4J1V0 119 aa2.02□□□□□ -2.09
VIM-210ENST00000637053 IGHV3-73A0A0B4J1V6 119 aa2.02□□□□□ -2.09
VIM-210ENST00000637053 IGHV1-3A0A0C4DH29 117 aa2.02□□□□□ -2.09
VIM-210ENST00000637053 A0A0G2JND7 137 aa2.02□□□□□ -2.09
VIM-210ENST00000637053 A6NDX4 124 aa2.02□□□□□ -2.09
VIM-210ENST00000637053 C16orf90A8MZG2 172 aa2.02□□□□□ -2.09
VIM-210ENST00000637053 H3BMM0 161 aa2.02□□□□□ -2.09
VIM-210ENST00000637053 FXYD1O00168 92 aa2.02□□□□□ -2.09
VIM-210ENST00000637053 INSP01308 110 aa2.02□□□□□ -2.09
VIM-210ENST00000637053 NOVP48745 357 aa2.02□□□□□ -2.09
VIM-210ENST00000637053 ROMO1P60602 79 aa2.02□□□□□ -2.09
VIM-210ENST00000637053 ZNF117Q03924 483 aa2.02□□□□□ -2.09
VIM-210ENST00000637053 DEFB121Q5J5C9 76 aa2.02□□□□□ -2.09
VIM-210ENST00000637053 C1orf134Q5TEV5 83 aa2.02□□□□□ -2.09
VIM-210ENST00000637053 SDIM1Q6ZPB5 146 aa2.02□□□□□ -2.09
VIM-210ENST00000637053 NTM-AS1Q6ZSK4 140 aa2.02□□□□□ -2.09
VIM-210ENST00000637053 BAGE3Q86Y29 109 aa2.02□□□□□ -2.09
VIM-210ENST00000637053 BAGE2Q86Y30 109 aa2.02□□□□□ -2.09
VIM-210ENST00000637053 DEFB107AQ8IZN7 70 aa2.02□□□□□ -2.09
VIM-210ENST00000637053 DYNAPQ8N1N2 210 aa2.02□□□□□ -2.09
VIM-210ENST00000637053 ZNF525Q8N782 197 aa2.02□□□□□ -2.09
VIM-210ENST00000637053 Q8N9W7 124 aa2.02□□□□□ -2.09
VIM-210ENST00000637053 UBE2WQ96B02 151 aa2.02□□□□□ -2.09
VIM-210ENST00000637053 LINC00574Q9H8X3 128 aa2.02□□□□□ -2.09
VIM-210ENST00000637053 NHP2Q9NX24 153 aaKnown RBP2.02□□□□□ -2.09
VIM-210ENST00000637053 TP53TG3Q9ULZ0 132 aa2.02□□□□□ -2.09
VIM-210ENST00000637053 HILPDAQ9Y5L2 63 aa2.02□□□□□ -2.09
VIM-210ENST00000637053 TRAPPC1Q9Y5R8 145 aa2.02□□□□□ -2.09
VIM-210ENST00000637053 U3KQK5 164 aa2.02□□□□□ -2.09
VIM-210ENST00000637053 RGPD2P0DJD1 1756 aa2.02□□□□□ -2.09
VIM-210ENST00000637053 MROH2AA6NES4 1674 aa2.02□□□□□ -2.09
VIM-210ENST00000637053 CFAP43Q8NDM7 1665 aa2.02□□□□□ -2.09
VIM-210ENST00000637053 MYO3AQ8NEV4 1616 aa2.02□□□□□ -2.09
VIM-210ENST00000637053 UNC13BO14795 1591 aa2.02□□□□□ -2.09
VIM-210ENST00000637053 CDC42BPAQ5VT25 1732 aa2.01□□□□□ -2.09
VIM-210ENST00000637053 A6NIN4 97 aa2.01□□□□□ -2.09
VIM-210ENST00000637053 PLA2G2AP14555 144 aa2.01□□□□□ -2.09
VIM-210ENST00000637053 MDKP21741 143 aaPredicted RBP2.01□□□□□ -2.09
VIM-210ENST00000637053 KLKP1Q107X0 134 aa2.01□□□□□ -2.09
VIM-210ENST00000637053 ZNF791Q3KP31 576 aaPredicted RBP2.01□□□□□ -2.09
VIM-210ENST00000637053 C9orf116Q5BN46 136 aaPredicted RBP2.01□□□□□ -2.09
VIM-210ENST00000637053 LYZL1Q6UWQ5 148 aa2.01□□□□□ -2.09
VIM-210ENST00000637053 C6orf201Q7Z4U5 140 aa2.01□□□□□ -2.09
VIM-210ENST00000637053 LYZL2Q7Z4W2 148 aa2.01□□□□□ -2.09
VIM-210ENST00000637053 FAM223AQ8IWN6 122 aa2.01□□□□□ -2.09
VIM-210ENST00000637053 C1orf64Q8NEQ6 169 aa2.01□□□□□ -2.09
VIM-210ENST00000637053 SPTSSBQ8NFR3 76 aa2.01□□□□□ -2.09
VIM-210ENST00000637053 CYP4F30PQ9H0H9 118 aa2.01□□□□□ -2.09
VIM-210ENST00000637053 FGF22Q9HCT0 170 aa2.01□□□□□ -2.09
VIM-210ENST00000637053 PTPRBP23467 1997 aa2.01□□□□□ -2.09
VIM-210ENST00000637053 VWDEQ8N2E2 1590 aa2.01□□□□□ -2.09
VIM-210ENST00000637053 MYO5AQ9Y4I1 1855 aaKnown RBP2.01□□□□□ -2.09
VIM-210ENST00000637053 ARFGEF2Q9Y6D5 1785 aa2□□□□□ -2.09
VIM-210ENST00000637053 PLXNB1O43157 2135 aa2□□□□□ -2.09
VIM-210ENST00000637053 PIKFYVEQ9Y2I7 2098 aa2□□□□□ -2.09
VIM-210ENST00000637053 COL5A3P25940 1745 aaPredicted RBP2□□□□□ -2.09
VIM-210ENST00000637053 ITSN1Q15811 1721 aa2□□□□□ -2.09
VIM-210ENST00000637053 TET2Q6N021 2002 aaPredicted RBP2□□□□□ -2.09
VIM-210ENST00000637053 KIAA0556O60303 1618 aa2□□□□□ -2.09
VIM-210ENST00000637053 HCG22E2RYF7 251 aa2□□□□□ -2.09
VIM-210ENST00000637053 C5orf67F2Z3F1 127 aa2□□□□□ -2.09
VIM-210ENST00000637053 CRPP02741 224 aa2□□□□□ -2.09
VIM-210ENST00000637053 CLPSP04118 112 aa2□□□□□ -2.09
VIM-210ENST00000637053 CD24P25063 80 aa2□□□□□ -2.09
VIM-210ENST00000637053 LYZP61626 148 aa2□□□□□ -2.09
VIM-210ENST00000637053 C15orf32Q32M92 178 aa2□□□□□ -2.09
VIM-210ENST00000637053 FAM229BQ4G0N7 80 aa2□□□□□ -2.09
VIM-210ENST00000637053 Q6ZQT0 140 aa2□□□□□ -2.09
VIM-210ENST00000637053 VMO1Q7Z5L0 202 aa2□□□□□ -2.09
VIM-210ENST00000637053 SMIM29Q86T20 159 aa2□□□□□ -2.09
VIM-210ENST00000637053 MUC7Q8TAX7 377 aa2□□□□□ -2.09
VIM-210ENST00000637053 TIMM21Q9BVV7 248 aa2□□□□□ -2.09
VIM-210ENST00000637053 BPESC1Q9GZL8 116 aa2□□□□□ -2.09
VIM-210ENST00000637053 DYNLRB1Q9NP97 96 aa2□□□□□ -2.09
VIM-210ENST00000637053 ICOSQ9Y6W8 199 aa2□□□□□ -2.09
VIM-210ENST00000637053 ARL2-SNX15V9GYD0 113 aa2□□□□□ -2.09
VIM-210ENST00000637053 IQGAP2Q13576 1575 aa2□□□□□ -2.09
VIM-210ENST00000637053 KIAA0586Q9BVV6 1533 aa2□□□□□ -2.09
VIM-210ENST00000637053 ANKRD12Q6UB98 2062 aa2□□□□□ -2.09
VIM-210ENST00000637053 WIZO95785 1651 aa1.99□□□□□ -2.09
VIM-210ENST00000637053 MED12LQ86YW9 2145 aa1.99□□□□□ -2.09
VIM-210ENST00000637053 IGLV7-46A0A075B6I9 117 aa1.99□□□□□ -2.09
VIM-210ENST00000637053 TRAV7A0A075B6U4 112 aa1.99□□□□□ -2.09
VIM-210ENST00000637053 TRBV6-7A0A0A0MS04 114 aa1.99□□□□□ -2.09
VIM-210ENST00000637053 A0A0B4J2C4 111 aa1.99□□□□□ -2.09
VIM-210ENST00000637053 TRBV10-3A0A0K0K1G6 114 aa1.99□□□□□ -2.09
VIM-210ENST00000637053 TRBV10-2A0A0K0K1G8 114 aa1.99□□□□□ -2.09
VIM-210ENST00000637053 LOC285095A0A1B0GVY8 99 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms