RNA–Protein interactions for RNA: ENST00000636670.1

CACNA1A-229, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 740 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-229ENST00000636670 H3BNG1 76 aa11.32□□□□□ -0.6
CACNA1A-229ENST00000636670 ORM1P02763 201 aa11.32□□□□□ -0.6
CACNA1A-229ENST00000636670 RNASE3P12724 160 aaKnown RBP11.32□□□□□ -0.6
CACNA1A-229ENST00000636670 ZNF506Q5JVG8 444 aa11.32□□□□□ -0.6
CACNA1A-229ENST00000636670 TEX261Q6UWH6 196 aa11.32□□□□□ -0.6
CACNA1A-229ENST00000636670 PTH2Q96A98 100 aa11.32□□□□□ -0.6
CACNA1A-229ENST00000636670 MED9Q9NWA0 146 aa11.32□□□□□ -0.6
CACNA1A-229ENST00000636670 TRAV4A0A0B4J268 109 aa11.31□□□□□ -0.6
CACNA1A-229ENST00000636670 RBFOX3A6NFN3 312 aa11.31□□□□□ -0.6
CACNA1A-229ENST00000636670 KRBOX1C9JBD0 128 aa11.31□□□□□ -0.6
CACNA1A-229ENST00000636670 TMEM250H0YL14 139 aa11.31□□□□□ -0.6
CACNA1A-229ENST00000636670 M0R036 132 aa11.31□□□□□ -0.6
CACNA1A-229ENST00000636670 RTL8CO15255 209 aa11.31□□□□□ -0.6
CACNA1A-229ENST00000636670 NDUFS6O75380 124 aaKnown RBP11.31□□□□□ -0.6
CACNA1A-229ENST00000636670 CXCL1P09341 107 aa11.31□□□□□ -0.6
CACNA1A-229ENST00000636670 S100A4P26447 101 aaKnown RBP11.31□□□□□ -0.6
CACNA1A-229ENST00000636670 OR5I1Q13606 314 aa11.31□□□□□ -0.6
CACNA1A-229ENST00000636670 IL36BQ9NZH7 164 aa11.31□□□□□ -0.6
CACNA1A-229ENST00000636670 UBR4Q5T4S7 5183 aa11.3□□□□□ -0.6
CACNA1A-229ENST00000636670 TRAV26-1A0A087WT03 109 aa11.3□□□□□ -0.6
CACNA1A-229ENST00000636670 CDK2AP2O75956 126 aa11.3□□□□□ -0.6
CACNA1A-229ENST00000636670 GNG4P50150 75 aa11.3□□□□□ -0.6
CACNA1A-229ENST00000636670 H3BVH4 76 aa11.29□□□□□ -0.6
CACNA1A-229ENST00000636670 IGHV3-53P01767 116 aa11.29□□□□□ -0.6
CACNA1A-229ENST00000636670 SLAQ13239 276 aa11.29□□□□□ -0.6
CACNA1A-229ENST00000636670 TOR2AQ5JU69 321 aa11.29□□□□□ -0.6
CACNA1A-229ENST00000636670 PIK3CD-AS1Q5SR53 167 aa11.29□□□□□ -0.6
CACNA1A-229ENST00000636670 PRR27Q6MZM9 219 aa11.29□□□□□ -0.6
CACNA1A-229ENST00000636670 FAM210AQ96ND0 272 aa11.29□□□□□ -0.6
CACNA1A-229ENST00000636670 DMBT1Q9UGM3 2413 aaPredicted RBP11.29□□□□□ -0.6
CACNA1A-229ENST00000636670 TRBV20OR9-2A0A075B6H5 130 aa11.28□□□□□ -0.6
CACNA1A-229ENST00000636670 C9JCJ5 164 aa11.28□□□□□ -0.6
CACNA1A-229ENST00000636670 NUDT3O95989 172 aa11.28□□□□□ -0.6
CACNA1A-229ENST00000636670 IGLV2-8P01709 118 aa11.28□□□□□ -0.6
CACNA1A-229ENST00000636670 ZNF876PQ49A33 203 aa11.28□□□□□ -0.6
CACNA1A-229ENST00000636670 Q8N1X5 172 aa11.28□□□□□ -0.6
CACNA1A-229ENST00000636670 POM121L12Q8N7R1 296 aa11.28□□□□□ -0.6
CACNA1A-229ENST00000636670 ZNF479Q96JC4 524 aa11.28□□□□□ -0.6
CACNA1A-229ENST00000636670 BIN3Q9NQY0 253 aa11.28□□□□□ -0.6
CACNA1A-229ENST00000636670 PRO0255Q9UI72 69 aa11.28□□□□□ -0.6
CACNA1A-229ENST00000636670 TRGV4A0A0C4DH28 118 aa11.27□□□□□ -0.61
CACNA1A-229ENST00000636670 A0A0J9YY99 117 aa11.27□□□□□ -0.61
CACNA1A-229ENST00000636670 RAB19A4D1S5 217 aa11.27□□□□□ -0.61
CACNA1A-229ENST00000636670 CIDEAO60543 219 aa11.27□□□□□ -0.61
CACNA1A-229ENST00000636670 SFTA3P0C7M3 94 aa11.27□□□□□ -0.61
CACNA1A-229ENST00000636670 FHL2Q14192 279 aa11.27□□□□□ -0.61
CACNA1A-229ENST00000636670 RNF212Q495C1 297 aa11.27□□□□□ -0.61
CACNA1A-229ENST00000636670 UBE2DNLQ8IWF7 75 aa11.27□□□□□ -0.61
CACNA1A-229ENST00000636670 OR4C5Q8NGB2 326 aa11.27□□□□□ -0.61
CACNA1A-229ENST00000636670 VSIG2Q96IQ7 327 aa11.27□□□□□ -0.61
CACNA1A-229ENST00000636670 PARLQ9H300 379 aa11.27□□□□□ -0.61
CACNA1A-229ENST00000636670 TMSB15BA0A087X1C1 80 aa11.26□□□□□ -0.61
CACNA1A-229ENST00000636670 GRIFINA4D1Z8 144 aa11.26□□□□□ -0.61
CACNA1A-229ENST00000636670 PGPEP1LA6NFU8 196 aa11.26□□□□□ -0.61
CACNA1A-229ENST00000636670 RS1O15537 224 aa11.26□□□□□ -0.61
CACNA1A-229ENST00000636670 ARMS2P0C7Q2 107 aa11.26□□□□□ -0.61
CACNA1A-229ENST00000636670 MGST1P10620 155 aaKnown RBP11.26□□□□□ -0.61
CACNA1A-229ENST00000636670 CRYBA4P53673 196 aa11.26□□□□□ -0.61
CACNA1A-229ENST00000636670 SYT8Q8NBV8 401 aa11.26□□□□□ -0.61
CACNA1A-229ENST00000636670 EIF5A2Q9GZV4 153 aaKnown RBP11.26□□□□□ -0.61
CACNA1A-229ENST00000636670 SCRT2Q9NQ03 307 aa11.26□□□□□ -0.61
CACNA1A-229ENST00000636670 PAX4O43316 350 aa11.25□□□□□ -0.61
CACNA1A-229ENST00000636670 FAM3BP58499 235 aaPredicted RBP11.25□□□□□ -0.61
CACNA1A-229ENST00000636670 RPL19P84098 196 aaKnown RBP11.25□□□□□ -0.61
CACNA1A-229ENST00000636670 C19orf71A6NCJ1 209 aa11.24□□□□□ -0.61
CACNA1A-229ENST00000636670 A8MWV9 139 aa11.24□□□□□ -0.61
CACNA1A-229ENST00000636670 CFAP126Q5VTH2 177 aa11.24□□□□□ -0.61
CACNA1A-229ENST00000636670 ZFP82Q8N141 532 aa11.24□□□□□ -0.61
CACNA1A-229ENST00000636670 HHLA3Q9XRX5 114 aa11.24□□□□□ -0.61
CACNA1A-229ENST00000636670 PHLDA3Q9Y5J5 127 aa11.24□□□□□ -0.61
CACNA1A-229ENST00000636670 ICOSQ9Y6W8 199 aa11.24□□□□□ -0.61
CACNA1A-229ENST00000636670 PCNPQ8WW12 178 aaKnown RBP11.23□□□□□ -0.61
CACNA1A-229ENST00000636670 DAZAP1Q96EP5 407 aaKnown RBP11.23□□□□□ -0.61
CACNA1A-229ENST00000636670 APOBP04114 4563 aaKnown RBP11.22□□□□□ -0.61
CACNA1A-229ENST00000636670 A0A096LPF7 62 aa11.22□□□□□ -0.61
CACNA1A-229ENST00000636670 SNAI2O43623 268 aa11.22□□□□□ -0.61
CACNA1A-229ENST00000636670 NXPH4O95158 308 aa11.22□□□□□ -0.61
CACNA1A-229ENST00000636670 P01737 135 aa11.22□□□□□ -0.61
CACNA1A-229ENST00000636670 GATA1P15976 413 aaPredicted RBP11.22□□□□□ -0.61
CACNA1A-229ENST00000636670 CCL18P55774 89 aa11.22□□□□□ -0.61
CACNA1A-229ENST00000636670 RPS20P60866 119 aaKnown RBP11.22□□□□□ -0.61
CACNA1A-229ENST00000636670 RHODO00212 210 aa11.21□□□□□ -0.61
CACNA1A-229ENST00000636670 SRP19P09132 144 aaKnown RBP11.21□□□□□ -0.61
CACNA1A-229ENST00000636670 OR5AL1P0C617 328 aa11.21□□□□□ -0.61
CACNA1A-229ENST00000636670 ZFP2Q6ZN57 461 aa11.21□□□□□ -0.61
CACNA1A-229ENST00000636670 LY96Q9Y6Y9 160 aa11.21□□□□□ -0.61
CACNA1A-229ENST00000636670 LRP1BQ9NZR2 4599 aa11.21□□□□□ -0.62
CACNA1A-229ENST00000636670 XKRY2A2RUG3 117 aa11.2□□□□□ -0.62
CACNA1A-229ENST00000636670 K7EN84 100 aa11.2□□□□□ -0.62
CACNA1A-229ENST00000636670 CEBPGP53567 150 aa11.2□□□□□ -0.62
CACNA1A-229ENST00000636670 RHOHQ15669 191 aa11.2□□□□□ -0.62
CACNA1A-229ENST00000636670 MRPL23Q16540 153 aaKnown RBP11.2□□□□□ -0.62
CACNA1A-229ENST00000636670 DMRTA1Q5VZB9 504 aa11.2□□□□□ -0.62
CACNA1A-229ENST00000636670 OR2D3Q8NGH3 330 aa11.2□□□□□ -0.62
CACNA1A-229ENST00000636670 SMIM7Q9BQ49 75 aa11.2□□□□□ -0.62
CACNA1A-229ENST00000636670 SSBP4Q9BWG4 385 aaPredicted RBP11.2□□□□□ -0.62
CACNA1A-229ENST00000636670 TRBV6-4A0A1B0GX49 114 aa11.19□□□□□ -0.62
CACNA1A-229ENST00000636670 M0R2N4 97 aa11.19□□□□□ -0.62
CACNA1A-229ENST00000636670 M0R381 172 aa11.19□□□□□ -0.62
CACNA1A-229ENST00000636670 GYPEP15421 78 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms