RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 PEX7O00628 323 aa12.16□□□□□ -0.46
PNKP-225ENST00000636214 PSCAO43653 123 aa12.16□□□□□ -0.46
PNKP-225ENST00000636214 MGST1P10620 155 aaKnown RBP12.16□□□□□ -0.46
PNKP-225ENST00000636214 ASIPP42127 132 aa12.16□□□□□ -0.46
PNKP-225ENST00000636214 ZNF506Q5JVG8 444 aa12.16□□□□□ -0.46
PNKP-225ENST00000636214 ARL2-SNX15V9GYD0 113 aa12.16□□□□□ -0.46
PNKP-225ENST00000636214 FABP5P3A8MUU1 101 aa12.15□□□□□ -0.46
PNKP-225ENST00000636214 FGF8P55075 233 aaPredicted RBP12.15□□□□□ -0.46
PNKP-225ENST00000636214 Q8N1X5 172 aa12.15□□□□□ -0.46
PNKP-225ENST00000636214 HIST1H2BAQ96A08 127 aa12.15□□□□□ -0.46
PNKP-225ENST00000636214 PTH2Q96A98 100 aa12.15□□□□□ -0.46
PNKP-225ENST00000636214 PGPEP1LA6NFU8 196 aa12.14□□□□□ -0.47
PNKP-225ENST00000636214 ARPC5O15511 151 aa12.14□□□□□ -0.47
PNKP-225ENST00000636214 UBE2G1P62253 170 aa12.14□□□□□ -0.47
PNKP-225ENST00000636214 ZNF726P1Q15940 193 aa12.14□□□□□ -0.47
PNKP-225ENST00000636214 LGALSLQ3ZCW2 172 aaPredicted RBP12.14□□□□□ -0.47
PNKP-225ENST00000636214 DPPA3Q6W0C5 159 aa12.14□□□□□ -0.47
PNKP-225ENST00000636214 Q86TA4 180 aa12.14□□□□□ -0.47
PNKP-225ENST00000636214 STOML3Q8TAV4 291 aa12.14□□□□□ -0.47
PNKP-225ENST00000636214 LINC00479Q96M42 142 aa12.14□□□□□ -0.47
PNKP-225ENST00000636214 KRTAP4-5Q9BYR2 181 aa12.14□□□□□ -0.47
PNKP-225ENST00000636214 SCRT2Q9NQ03 307 aa12.14□□□□□ -0.47
PNKP-225ENST00000636214 APOBP04114 4563 aaKnown RBP12.13□□□□□ -0.47
PNKP-225ENST00000636214 A0A087WTM6 91 aa12.13□□□□□ -0.47
PNKP-225ENST00000636214 MAP1LC3B2A6NCE7 125 aa12.13□□□□□ -0.47
PNKP-225ENST00000636214 A8MWV9 139 aa12.13□□□□□ -0.47
PNKP-225ENST00000636214 LINC01556Q5JQF7 62 aa12.13□□□□□ -0.47
PNKP-225ENST00000636214 ATP6V0E2Q8NHE4 81 aa12.13□□□□□ -0.47
PNKP-225ENST00000636214 MAP1LC3BQ9GZQ8 125 aa12.13□□□□□ -0.47
PNKP-225ENST00000636214 FAM74A7A6NL05 159 aa12.12□□□□□ -0.47
PNKP-225ENST00000636214 B4DEV8 164 aa12.12□□□□□ -0.47
PNKP-225ENST00000636214 RNASE3P12724 160 aaKnown RBP12.12□□□□□ -0.47
PNKP-225ENST00000636214 LELP1Q5T871 98 aa12.12□□□□□ -0.47
PNKP-225ENST00000636214 SYT8Q8NBV8 401 aa12.12□□□□□ -0.47
PNKP-225ENST00000636214 GTSF1LQ9H1H1 148 aa12.12□□□□□ -0.47
PNKP-225ENST00000636214 PIK3CD-AS1Q5SR53 167 aa12.11□□□□□ -0.47
PNKP-225ENST00000636214 FMC1Q96HJ9 113 aa12.11□□□□□ -0.47
PNKP-225ENST00000636214 ZFP30Q9Y2G7 519 aa12.11□□□□□ -0.47
PNKP-225ENST00000636214 CST9LP1Q5W188 147 aa12.1□□□□□ -0.47
PNKP-225ENST00000636214 ZFP2Q6ZN57 461 aa12.1□□□□□ -0.47
PNKP-225ENST00000636214 TCEAL7Q9BRU2 100 aa12.1□□□□□ -0.47
PNKP-225ENST00000636214 PARLQ9H300 379 aa12.1□□□□□ -0.47
PNKP-225ENST00000636214 Q9HAA7 133 aa12.1□□□□□ -0.47
PNKP-225ENST00000636214 IGKV3D-20A0A0C4DH25 116 aa12.09□□□□□ -0.47
PNKP-225ENST00000636214 H3BVH4 76 aa12.09□□□□□ -0.47
PNKP-225ENST00000636214 M0R036 132 aa12.09□□□□□ -0.47
PNKP-225ENST00000636214 RHODO00212 210 aa12.09□□□□□ -0.47
PNKP-225ENST00000636214 IGHV3-30P01768 117 aa12.09□□□□□ -0.47
PNKP-225ENST00000636214 IGHV3-33P01772 117 aa12.09□□□□□ -0.47
PNKP-225ENST00000636214 IGHV3-30-3P0DP02 117 aa12.09□□□□□ -0.47
PNKP-225ENST00000636214 IGHV3-30-5P0DP03 117 aa12.09□□□□□ -0.47
PNKP-225ENST00000636214 FUSP35637 526 aaKnown RBP eCLIP12.09□□□□□ -0.47
PNKP-225ENST00000636214 AKR1C3P42330 323 aa12.09□□□□□ -0.47
PNKP-225ENST00000636214 FAM162BQ5T6X4 162 aa12.09□□□□□ -0.47
PNKP-225ENST00000636214 IL36BQ9NZH7 164 aa12.09□□□□□ -0.47
PNKP-225ENST00000636214 GAGE12JA6NER3 117 aa12.08□□□□□ -0.48
PNKP-225ENST00000636214 GAGE1Q13065 139 aa12.08□□□□□ -0.48
PNKP-225ENST00000636214 GAGE4Q13068 117 aa12.08□□□□□ -0.48
PNKP-225ENST00000636214 GAGE5Q13069 117 aa12.08□□□□□ -0.48
PNKP-225ENST00000636214 GAGE13Q4V321 117 aa12.08□□□□□ -0.48
PNKP-225ENST00000636214 OR11H4Q8NGC9 324 aa12.08□□□□□ -0.48
PNKP-225ENST00000636214 IBA57-AS1B1ANH7 110 aa12.07□□□□□ -0.48
PNKP-225ENST00000636214 TPT1P13693 172 aaKnown RBP12.07□□□□□ -0.48
PNKP-225ENST00000636214 FHITP49789 147 aa12.07□□□□□ -0.48
PNKP-225ENST00000636214 ZC2HC1AQ96GY0 325 aa12.07□□□□□ -0.48
PNKP-225ENST00000636214 PHLDA3Q9Y5J5 127 aa12.07□□□□□ -0.48
PNKP-225ENST00000636214 SH2D1AO60880 128 aa12.06□□□□□ -0.48
PNKP-225ENST00000636214 ARMS2P0C7Q2 107 aa12.06□□□□□ -0.48
PNKP-225ENST00000636214 FAM74A4Q5TZK3 123 aa12.06□□□□□ -0.48
PNKP-225ENST00000636214 CYTL1Q9NRR1 136 aa12.06□□□□□ -0.48
PNKP-225ENST00000636214 IGLV5-52A0A0A0MRZ9 124 aa12.05□□□□□ -0.48
PNKP-225ENST00000636214 GRIFINA4D1Z8 144 aa12.05□□□□□ -0.48
PNKP-225ENST00000636214 EPM2AB3EWF7 344 aa12.05□□□□□ -0.48
PNKP-225ENST00000636214 KRBOX1C9JBD0 128 aa12.05□□□□□ -0.48
PNKP-225ENST00000636214 G3V3Q6 166 aa12.05□□□□□ -0.48
PNKP-225ENST00000636214 PFDN1O60925 122 aa12.05□□□□□ -0.48
PNKP-225ENST00000636214 GCSHP23434 173 aa12.05□□□□□ -0.48
PNKP-225ENST00000636214 ZNF345Q14585 488 aa12.05□□□□□ -0.48
PNKP-225ENST00000636214 TM2D2Q9BX73 214 aa12.05□□□□□ -0.48
PNKP-225ENST00000636214 A0A087WWC5 75 aa12.04□□□□□ -0.48
PNKP-225ENST00000636214 TMSB15BA0A087X1C1 80 aa12.04□□□□□ -0.48
PNKP-225ENST00000636214 KANTRA0A1W2PQU2 76 aa12.04□□□□□ -0.48
PNKP-225ENST00000636214 SMLR1H3BR10 107 aa12.04□□□□□ -0.48
PNKP-225ENST00000636214 LAGE3Q14657 143 aa12.04□□□□□ -0.48
PNKP-225ENST00000636214 TOR2AQ5JU69 321 aa12.04□□□□□ -0.48
PNKP-225ENST00000636214 DNLZQ5SXM8 178 aa12.04□□□□□ -0.48
PNKP-225ENST00000636214 DMRTA1Q5VZB9 504 aa12.04□□□□□ -0.48
PNKP-225ENST00000636214 FAM213BQ8TBF2 198 aa12.04□□□□□ -0.48
PNKP-225ENST00000636214 NTN5Q8WTR8 489 aaPredicted RBP12.04□□□□□ -0.48
PNKP-225ENST00000636214 SFT2D1Q8WV19 159 aa12.04□□□□□ -0.48
PNKP-225ENST00000636214 JPT2Q9H910 190 aa12.04□□□□□ -0.48
PNKP-225ENST00000636214 TRBV6-1A0A0K0K1D8 114 aa12.03□□□□□ -0.48
PNKP-225ENST00000636214 UMAD1C9J7I0 102 aa12.03□□□□□ -0.48
PNKP-225ENST00000636214 M0R381 172 aa12.03□□□□□ -0.48
PNKP-225ENST00000636214 PAGE4O60829 102 aa12.03□□□□□ -0.48
PNKP-225ENST00000636214 LTAP01374 205 aa12.03□□□□□ -0.48
PNKP-225ENST00000636214 EIF5AP63241 154 aaKnown RBP12.03□□□□□ -0.48
PNKP-225ENST00000636214 COX8CQ7Z4L0 72 aa12.03□□□□□ -0.48
PNKP-225ENST00000636214 ZFP82Q8N141 532 aa12.03□□□□□ -0.48
PNKP-225ENST00000636214 KCNRGQ8N5I3 272 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 206.9 ms