RNA–Protein interactions for RNA: ENST00000636022.1

CACNA1A-222, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 3

Gene CACNA1A, Length 552 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-222	ENST00000636022	PET100	P0DJ07	73 aa		5	□□□□□ -1.61
CACNA1A-222	ENST00000636022	ADCYAP1	P18509	176 aa		5	□□□□□ -1.61
CACNA1A-222	ENST00000636022	RPL12	P30050	165 aa	Known RBP	5	□□□□□ -1.61
CACNA1A-222	ENST00000636022	TAGLN2	P37802	199 aa	Known RBP	5	□□□□□ -1.61
CACNA1A-222	ENST00000636022	CSN1S1	P47710	185 aa		5	□□□□□ -1.61
CACNA1A-222	ENST00000636022	CRYBA4	P53673	196 aa		5	□□□□□ -1.61
CACNA1A-222	ENST00000636022	LINC00315	P59091	139 aa		5	□□□□□ -1.61
CACNA1A-222	ENST00000636022	BLOC1S1	P78537	153 aa		5	□□□□□ -1.61
CACNA1A-222	ENST00000636022	SLA	Q13239	276 aa		5	□□□□□ -1.61
CACNA1A-222	ENST00000636022	PEA15	Q15121	130 aa		5	□□□□□ -1.61
CACNA1A-222	ENST00000636022	KHDC3L	Q587J8	217 aa		5	□□□□□ -1.61
CACNA1A-222	ENST00000636022	MUC21	Q5SSG8	566 aa		5	□□□□□ -1.61
CACNA1A-222	ENST00000636022		Q6AWC8	147 aa		5	□□□□□ -1.61
CACNA1A-222	ENST00000636022	CDPF1	Q6NVV7	123 aa		5	□□□□□ -1.61
CACNA1A-222	ENST00000636022	LYPD5	Q6UWN5	251 aa		5	□□□□□ -1.61
CACNA1A-222	ENST00000636022	SMIM15	Q7Z3B0	74 aa		5	□□□□□ -1.61
CACNA1A-222	ENST00000636022	CBLN2	Q8IUK8	224 aa		5	□□□□□ -1.61
CACNA1A-222	ENST00000636022	RASL10A	Q92737	203 aa		5	□□□□□ -1.61
CACNA1A-222	ENST00000636022	HIST1H2BA	Q96A08	127 aa		5	□□□□□ -1.61
CACNA1A-222	ENST00000636022	MRPL18	Q9H0U6	180 aa	Known RBP	5	□□□□□ -1.61
CACNA1A-222	ENST00000636022	RPH3AL	Q9UNE2	315 aa		5	□□□□□ -1.61
CACNA1A-222	ENST00000636022	HHLA3	Q9XRX5	114 aa		5	□□□□□ -1.61
CACNA1A-222	ENST00000636022	LENEP	Q9Y5L5	61 aa		5	□□□□□ -1.61
CACNA1A-222	ENST00000636022	ICOS	Q9Y6W8	199 aa		5	□□□□□ -1.61
CACNA1A-222	ENST00000636022	SERTM2	A0A1B0GWG4	89 aa		4.99	□□□□□ -1.61
CACNA1A-222	ENST00000636022	XKRY2	A2RUG3	117 aa		4.99	□□□□□ -1.61
CACNA1A-222	ENST00000636022	SIVA1	O15304	175 aa		4.99	□□□□□ -1.61
CACNA1A-222	ENST00000636022	NXPH4	O95158	308 aa		4.99	□□□□□ -1.61
CACNA1A-222	ENST00000636022	IFNA5	P01569	189 aa		4.99	□□□□□ -1.61
CACNA1A-222	ENST00000636022	MT-ND4L	P03901	98 aa		4.99	□□□□□ -1.61
CACNA1A-222	ENST00000636022	TAS2R45	P59539	299 aa		4.99	□□□□□ -1.61
CACNA1A-222	ENST00000636022	ZNF415	Q09FC8	603 aa		4.99	□□□□□ -1.61
CACNA1A-222	ENST00000636022	TMEM183B	Q1AE95	376 aa		4.99	□□□□□ -1.61
CACNA1A-222	ENST00000636022	TDRG1	Q3Y452	100 aa		4.99	□□□□□ -1.61
CACNA1A-222	ENST00000636022	TMEM183A	Q8IXX5	376 aa		4.99	□□□□□ -1.61
CACNA1A-222	ENST00000636022	MAPKAPK5-AS1	Q8N8E1	139 aa		4.99	□□□□□ -1.61
CACNA1A-222	ENST00000636022	OR2D3	Q8NGH3	330 aa		4.99	□□□□□ -1.61
CACNA1A-222	ENST00000636022	OR10G4	Q8NGN3	311 aa		4.99	□□□□□ -1.61
CACNA1A-222	ENST00000636022	SCGB1C1	Q8TD33	95 aa		4.99	□□□□□ -1.61
CACNA1A-222	ENST00000636022	TVP23C	Q96ET8	276 aa		4.99	□□□□□ -1.61
CACNA1A-222	ENST00000636022	ZNF479	Q96JC4	524 aa		4.99	□□□□□ -1.61
CACNA1A-222	ENST00000636022	C8orf49	Q96NF6	230 aa		4.99	□□□□□ -1.61
CACNA1A-222	ENST00000636022	SNHG12	Q9BXW3	62 aa		4.99	□□□□□ -1.61
CACNA1A-222	ENST00000636022	SMIM3	Q9BZL3	60 aa		4.99	□□□□□ -1.61
CACNA1A-222	ENST00000636022	OTOR	Q9NRC9	128 aa		4.99	□□□□□ -1.61
CACNA1A-222	ENST00000636022	DMBT1	Q9UGM3	2413 aa	Predicted RBP	4.99	□□□□□ -1.61
CACNA1A-222	ENST00000636022	PGP	A6NDG6	321 aa		4.98	□□□□□ -1.61
CACNA1A-222	ENST00000636022		K7EQD1	137 aa		4.98	□□□□□ -1.61
CACNA1A-222	ENST00000636022	SFTA3	P0C7M3	94 aa		4.98	□□□□□ -1.61
CACNA1A-222	ENST00000636022	MRPL23	Q16540	153 aa	Known RBP	4.98	□□□□□ -1.61
CACNA1A-222	ENST00000636022	PQLC2	Q6ZP29	291 aa		4.98	□□□□□ -1.61
CACNA1A-222	ENST00000636022	GOLT1A	Q6ZVE7	132 aa		4.98	□□□□□ -1.61
CACNA1A-222	ENST00000636022	NEGR1	Q7Z3B1	354 aa		4.98	□□□□□ -1.61
CACNA1A-222	ENST00000636022		Q8N1X5	172 aa		4.98	□□□□□ -1.61
CACNA1A-222	ENST00000636022	SPX	Q9BT56	116 aa		4.98	□□□□□ -1.61
CACNA1A-222	ENST00000636022	SEC11C	Q9BY50	192 aa		4.98	□□□□□ -1.61
CACNA1A-222	ENST00000636022	SMCO4	Q9NRQ5	59 aa		4.98	□□□□□ -1.61
CACNA1A-222	ENST00000636022	TNFRSF18	Q9Y5U5	241 aa		4.98	□□□□□ -1.61
CACNA1A-222	ENST00000636022	TRGV11	A0A075B6L2	103 aa		4.97	□□□□□ -1.61
CACNA1A-222	ENST00000636022	TRAV8-1	A0A0A6YYK1	113 aa		4.97	□□□□□ -1.61
CACNA1A-222	ENST00000636022	TRGV4	A0A0C4DH28	118 aa		4.97	□□□□□ -1.61
CACNA1A-222	ENST00000636022	IGHV3-16	A0A0C4DH30	117 aa		4.97	□□□□□ -1.61
CACNA1A-222	ENST00000636022	GNRH2	O43555	120 aa		4.97	□□□□□ -1.61
CACNA1A-222	ENST00000636022	GIP	P09681	153 aa	Predicted RBP	4.97	□□□□□ -1.61
CACNA1A-222	ENST00000636022	ODF1	Q14990	250 aa		4.97	□□□□□ -1.61
CACNA1A-222	ENST00000636022	ACOT6	Q3I5F7	207 aa	Predicted RBP	4.97	□□□□□ -1.61
CACNA1A-222	ENST00000636022	FAM159A	Q6UWV7	190 aa		4.97	□□□□□ -1.61
CACNA1A-222	ENST00000636022	TMUB2	Q71RG4	321 aa		4.97	□□□□□ -1.61
CACNA1A-222	ENST00000636022	OR2G3	Q8NGZ4	309 aa		4.97	□□□□□ -1.61
CACNA1A-222	ENST00000636022	CMTM2	Q8TAZ6	248 aa		4.97	□□□□□ -1.61
CACNA1A-222	ENST00000636022	TRAV4	A0A0B4J268	109 aa		4.96	□□□□□ -1.62
CACNA1A-222	ENST00000636022	TRAV21	A0A0B4J279	112 aa		4.96	□□□□□ -1.62
CACNA1A-222	ENST00000636022		A0A1W2PPV4	95 aa		4.96	□□□□□ -1.62
CACNA1A-222	ENST00000636022		M0R143	59 aa		4.96	□□□□□ -1.62
CACNA1A-222	ENST00000636022		M0R2P5	195 aa		4.96	□□□□□ -1.62
CACNA1A-222	ENST00000636022	HMGB3	O15347	200 aa	Known RBP	4.96	□□□□□ -1.62
CACNA1A-222	ENST00000636022	EIF4EBP3	O60516	100 aa	Predicted RBP	4.96	□□□□□ -1.62
CACNA1A-222	ENST00000636022	ORM1	P02763	201 aa		4.96	□□□□□ -1.62
CACNA1A-222	ENST00000636022	TYMS	P04818	313 aa		4.96	□□□□□ -1.62
CACNA1A-222	ENST00000636022	STAG3L2	P0CL84	134 aa		4.96	□□□□□ -1.62
CACNA1A-222	ENST00000636022	STAG3L3	P0CL85	134 aa		4.96	□□□□□ -1.62
CACNA1A-222	ENST00000636022	ARL14EPL	P0DKL9	152 aa		4.96	□□□□□ -1.62
CACNA1A-222	ENST00000636022	GYPE	P15421	78 aa		4.96	□□□□□ -1.62
CACNA1A-222	ENST00000636022	SRI	P30626	198 aa		4.96	□□□□□ -1.62
CACNA1A-222	ENST00000636022	PPT1	P50897	306 aa		4.96	□□□□□ -1.62
CACNA1A-222	ENST00000636022	GNG5	P63218	68 aa		4.96	□□□□□ -1.62
CACNA1A-222	ENST00000636022	ALKAL2	Q6UX46	152 aa		4.96	□□□□□ -1.62
CACNA1A-222	ENST00000636022	WFDC10B	Q8IUB3	73 aa		4.96	□□□□□ -1.62
CACNA1A-222	ENST00000636022	HSD17B11	Q8NBQ5	300 aa		4.96	□□□□□ -1.62
CACNA1A-222	ENST00000636022	OR10G9	Q8NGN4	311 aa		4.96	□□□□□ -1.62
CACNA1A-222	ENST00000636022	OR10G7	Q8NGN6	311 aa		4.96	□□□□□ -1.62
CACNA1A-222	ENST00000636022	SCRT2	Q9NQ03	307 aa		4.96	□□□□□ -1.62
CACNA1A-222	ENST00000636022	NAGK	Q9UJ70	344 aa		4.96	□□□□□ -1.62
CACNA1A-222	ENST00000636022		F6UZH7	168 aa		4.95	□□□□□ -1.62
CACNA1A-222	ENST00000636022	DNAH10OS	P0CZ25	163 aa		4.95	□□□□□ -1.62
CACNA1A-222	ENST00000636022	FUS	P35637	526 aa	Known RBP eCLIP	4.95	□□□□□ -1.62
CACNA1A-222	ENST00000636022	ZNF80	P51504	273 aa	Predicted RBP	4.95	□□□□□ -1.62
CACNA1A-222	ENST00000636022	PTTG1IP	P53801	180 aa		4.95	□□□□□ -1.62
CACNA1A-222	ENST00000636022	TIRAP	P58753	221 aa		4.95	□□□□□ -1.62
CACNA1A-222	ENST00000636022	NFE4	Q86UQ8	179 aa		4.95	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms