RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 GGCTO75223 188 aaKnown RBP0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 SC5DO75845 299 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 NPPAP01160 153 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 OXTP01178 125 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 PPYP01298 95 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 IFNA14P01570 189 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 MBP02144 154 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 APOC1P02654 83 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 PMP2P02689 132 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 IFNA4P05014 189 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 CD2P06729 351 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 UCHL1P09936 223 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 IGLC1P0CG04 106 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 STAG3L3P0CL85 134 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 PYYP10082 97 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 HLA-DRB4P13762 266 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 HIST1H1DP16402 221 aaKnown RBP0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 GADD45AP24522 165 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 PSMB9P28065 219 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 ETV6P41212 452 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 LPAR6P43657 344 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 GNG2P59768 71 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 ARPC4P59998 168 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 CDC42P60953 191 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 UBE2KP61086 200 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 RPL37AP61513 92 aaKnown RBP0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 RRAS2P62070 204 aaPredicted RBP0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 NCS1P62166 190 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 QRFPP83859 136 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 ZNF90Q03938 601 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 SLC38A11Q08AI6 406 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 NEDD8Q15843 81 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 RAB11BQ15907 218 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 ATP6V1FQ16864 119 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 RTL8BQ17RB0 113 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 ESRGQ1W209 222 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 LGALS9BQ3B8N2 356 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 Q499Y3 187 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 CDNFQ49AH0 187 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 ACSM3Q53FZ2 586 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 HSD17B12Q53GQ0 312 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 AKIRIN2Q53H80 203 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 COQ5Q5HYK3 327 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 IDNKQ5T6J7 187 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 FAM78BQ5VT40 261 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 TMEM244Q5VVB8 128 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 CD200R1LQ6Q8B3 271 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 AMTNQ6UX39 209 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 ZNF705AQ6ZN79 300 aaPredicted RBP0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 TMEM91Q6ZNR0 172 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 LYZL2Q7Z4W2 148 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 TMED4Q7Z7H5 227 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 PRNTQ86SH4 94 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 SNX29P2Q8IUI4 249 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 FAM223AQ8IWN6 122 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 Q8IYB0 196 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 GAPTQ8N292 157 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 STX19Q8N4C7 294 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 TCTEX1D1Q8N7M0 179 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 ZNF565Q8N9K5 539 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 ZNF738Q8NE65 137 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 PXT1Q8NFP0 134 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 OR8A1Q8NGG7 326 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 OR4C16Q8NGL9 310 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 OR2K2Q8NGT1 345 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 TMEM167AQ8TBQ9 72 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 GPX8Q8TED1 209 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 DCANP1Q8TF63 244 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 PP6455Q8WZ26 134 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 ANP32BQ92688 251 aaKnown RBP0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 LSM10Q969L4 123 aaKnown RBP0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 GALMQ96C23 342 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 FAM19A4Q96LR4 140 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 CNBD2Q96M20 576 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 C20orf166-AS1Q96NR2 134 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 YPEL2Q96QA6 119 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 TP53RKQ96S44 253 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 S100A13Q99584 98 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 TSNAXQ99598 290 aaKnown RBP0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 LINC00467Q9BRT7 94 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 SIKE1Q9BRV8 207 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 TMEM208Q9BTX3 173 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 TMEM70Q9BUB7 260 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 ZNF436Q9C0F3 470 aaPredicted RBP0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 CCDC90BQ9GZT6 254 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 ATG5Q9H1Y0 275 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 OR51E2Q9H255 320 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 NOP10Q9NPE3 64 aaKnown RBP0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 TMEM14BQ9NUH8 114 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 RASL12Q9NYN1 266 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 SMPXQ9UHP9 88 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 VAX2Q9UIW0 290 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 ANXA10Q9UJ72 324 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 AP3M1Q9Y2T2 418 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 LSM2Q9Y333 95 aaKnown RBP0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 MRPS16Q9Y3D3 137 aaKnown RBP0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 KLF12Q9Y4X4 402 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 HLA-DRB4X5D2U9 266 aa0.44□□□□□ -2.34
SMARCB1-209ENST00000635578 MACF1Q9UPN3 7388 aaKnown RBP0.43□□□□□ -2.34
SMARCB1-209ENST00000635578 TMSB15BA0A087X1C1 80 aa0.43□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms