RNA–Protein interactions for RNA: ENST00000635193.1

COL11A1-211, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL11A1, Length 5,289 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-211ENST00000635193 PRR30Q53SZ7 412 aaPredicted RBP9.13□□□□□ -0.95
COL11A1-211ENST00000635193 MRPL53Q96EL3 112 aaKnown RBP9.13□□□□□ -0.95
COL11A1-211ENST00000635193 SHANK1Q9Y566 2161 aa9.13□□□□□ -0.95
COL11A1-211ENST00000635193 hADV29S1A0JD25 119 aa9.13□□□□□ -0.95
COL11A1-211ENST00000635193 LINC01356Q8N9X3 169 aa9.13□□□□□ -0.95
COL11A1-211ENST00000635193 PRB1P04280 392 aa9.12□□□□□ -0.95
COL11A1-211ENST00000635193 E9PLD3 99 aa9.12□□□□□ -0.95
COL11A1-211ENST00000635193 CRYGBP07316 175 aa9.12□□□□□ -0.95
COL11A1-211ENST00000635193 MSMBP08118 114 aa9.12□□□□□ -0.95
COL11A1-211ENST00000635193 HOXD3P31249 432 aaPredicted RBP9.12□□□□□ -0.95
COL11A1-211ENST00000635193 MSRB1Q9NZV6 116 aa9.12□□□□□ -0.95
COL11A1-211ENST00000635193 H0YGX0 51 aa9.12□□□□□ -0.95
COL11A1-211ENST00000635193 ZNF561-AS1K7EIQ3 104 aa9.12□□□□□ -0.95
COL11A1-211ENST00000635193 IGFL3Q6UXB1 125 aa9.12□□□□□ -0.95
COL11A1-211ENST00000635193 RPL39LQ96EH5 51 aaKnown RBP9.12□□□□□ -0.95
COL11A1-211ENST00000635193 CTSZQ9UBR2 303 aa9.12□□□□□ -0.95
COL11A1-211ENST00000635193 FAM215AQ9Y5M1 114 aa9.12□□□□□ -0.95
COL11A1-211ENST00000635193 C22orf46C9J442 243 aa9.12□□□□□ -0.95
COL11A1-211ENST00000635193 IGLV2-14P01704 120 aa9.12□□□□□ -0.95
COL11A1-211ENST00000635193 BRK1Q8WUW1 75 aa9.12□□□□□ -0.95
COL11A1-211ENST00000635193 LENEPQ9Y5L5 61 aa9.12□□□□□ -0.95
COL11A1-211ENST00000635193 LINC01619G3V211 115 aa9.11□□□□□ -0.95
COL11A1-211ENST00000635193 ODF1Q14990 250 aa9.11□□□□□ -0.95
COL11A1-211ENST00000635193 ZFP2Q6ZN57 461 aa9.11□□□□□ -0.95
COL11A1-211ENST00000635193 DENND4CQ5VZ89 1909 aa9.11□□□□□ -0.95
COL11A1-211ENST00000635193 I3L2K1 104 aa9.11□□□□□ -0.95
COL11A1-211ENST00000635193 LHBP01229 141 aa9.11□□□□□ -0.95
COL11A1-211ENST00000635193 CUL9Q8IWT3 2517 aa9.11□□□□□ -0.95
COL11A1-211ENST00000635193 PLXNB3Q9ULL4 1909 aa9.11□□□□□ -0.95
COL11A1-211ENST00000635193 SPRNQ5BIV9 151 aa9.11□□□□□ -0.95
COL11A1-211ENST00000635193 SPANXB1Q9NS25 103 aaPredicted RBP9.11□□□□□ -0.95
COL11A1-211ENST00000635193 SLC25A29Q8N8R3 303 aa9.11□□□□□ -0.95
COL11A1-211ENST00000635193 NKAPP1Q8N9T2 125 aa9.11□□□□□ -0.95
COL11A1-211ENST00000635193 SPRY2O43597 315 aa9.11□□□□□ -0.95
COL11A1-211ENST00000635193 IGFBPL1Q8WX77 278 aa9.1□□□□□ -0.95
COL11A1-211ENST00000635193 A0A0J9YXV3 536 aa9.1□□□□□ -0.95
COL11A1-211ENST00000635193 LGALS9O00182 355 aa9.1□□□□□ -0.95
COL11A1-211ENST00000635193 Q71RC1 249 aaPredicted RBP9.1□□□□□ -0.95
COL11A1-211ENST00000635193 ATRXP46100 2492 aa9.1□□□□□ -0.95
COL11A1-211ENST00000635193 IGKV1-17P01599 117 aa9.1□□□□□ -0.95
COL11A1-211ENST00000635193 K7EIM0 57 aa9.09□□□□□ -0.95
COL11A1-211ENST00000635193 LINC00643Q86TS7 51 aa9.09□□□□□ -0.95
COL11A1-211ENST00000635193 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.09□□□□□ -0.95
COL11A1-211ENST00000635193 IGKV2-29A2NJV5 120 aaPredicted RBP9.09□□□□□ -0.95
COL11A1-211ENST00000635193 GATA3P23771 443 aa9.09□□□□□ -0.95
COL11A1-211ENST00000635193 CLEC2BQ92478 149 aa9.09□□□□□ -0.95
COL11A1-211ENST00000635193 PIFOQ8TCI5 191 aa9.09□□□□□ -0.95
COL11A1-211ENST00000635193 IGKV1OR2-108A0A075B7D4 117 aa9.09□□□□□ -0.95
COL11A1-211ENST00000635193 TCL1BO95988 128 aa9.09□□□□□ -0.95
COL11A1-211ENST00000635193 BAALCQ8WXS3 180 aa9.09□□□□□ -0.95
COL11A1-211ENST00000635193 RITA1Q96K30 269 aa9.09□□□□□ -0.95
COL11A1-211ENST00000635193 EML6Q6ZMW3 1958 aa9.08□□□□□ -0.96
COL11A1-211ENST00000635193 NDUFA11Q86Y39 141 aa9.08□□□□□ -0.96
COL11A1-211ENST00000635193 UQCRQO14949 82 aa9.08□□□□□ -0.96
COL11A1-211ENST00000635193 SND1-IT1Q9HBX3 110 aa9.08□□□□□ -0.96
COL11A1-211ENST00000635193 PCNX1Q96RV3 2341 aa9.08□□□□□ -0.96
COL11A1-211ENST00000635193 NOTCH2Q04721 2471 aa9.07□□□□□ -0.96
COL11A1-211ENST00000635193 TOMM6Q96B49 74 aa9.07□□□□□ -0.96
COL11A1-211ENST00000635193 USF3Q68DE3 2245 aa9.07□□□□□ -0.96
COL11A1-211ENST00000635193 WFDC9Q8NEX5 89 aa9.07□□□□□ -0.96
COL11A1-211ENST00000635193 PRSS33Q8NF86 280 aa9.07□□□□□ -0.96
COL11A1-211ENST00000635193 FRMPD3Q5JV73 1810 aa9.07□□□□□ -0.96
COL11A1-211ENST00000635193 NOTCH3Q9UM47 2321 aa9.07□□□□□ -0.96
COL11A1-211ENST00000635193 Q8N1Y9 231 aa9.07□□□□□ -0.96
COL11A1-211ENST00000635193 NOTCH4Q99466 2003 aa9.07□□□□□ -0.96
COL11A1-211ENST00000635193 COL4A3Q01955 1670 aa9.07□□□□□ -0.96
COL11A1-211ENST00000635193 KIAA1671Q9BY89 1806 aa9.06□□□□□ -0.96
COL11A1-211ENST00000635193 TNRC6AQ8NDV7 1962 aaKnown RBP9.06□□□□□ -0.96
COL11A1-211ENST00000635193 CTRLP40313 264 aa9.06□□□□□ -0.96
COL11A1-211ENST00000635193 H3BUA1 57 aa9.06□□□□□ -0.96
COL11A1-211ENST00000635193 HOXB4P17483 251 aaPredicted RBP9.06□□□□□ -0.96
COL11A1-211ENST00000635193 IGLV11-55A0A075B6I3 123 aa9.06□□□□□ -0.96
COL11A1-211ENST00000635193 C11orf86A6NJI1 115 aa9.06□□□□□ -0.96
COL11A1-211ENST00000635193 TANC1Q9C0D5 1861 aa9.06□□□□□ -0.96
COL11A1-211ENST00000635193 CREBBPQ92793 2442 aa9.06□□□□□ -0.96
COL11A1-211ENST00000635193 ODF3L1Q8IXM7 274 aa9.05□□□□□ -0.96
COL11A1-211ENST00000635193 NPBQ8NG41 125 aa9.05□□□□□ -0.96
COL11A1-211ENST00000635193 YPEL4Q96NS1 127 aa9.05□□□□□ -0.96
COL11A1-211ENST00000635193 TP73-AS1Q9UF72 201 aa9.05□□□□□ -0.96
COL11A1-211ENST00000635193 DAD1P61803 113 aa9.05□□□□□ -0.96
COL11A1-211ENST00000635193 PRB2P02812 416 aaPredicted RBP9.05□□□□□ -0.96
COL11A1-211ENST00000635193 DAND5Q8N907 189 aa9.05□□□□□ -0.96
COL11A1-211ENST00000635193 TRAV4A0A0B4J268 109 aa9.05□□□□□ -0.96
COL11A1-211ENST00000635193 CTSGP08311 255 aa9.05□□□□□ -0.96
COL11A1-211ENST00000635193 A0A1B0GXF2 115 aa9.04□□□□□ -0.96
COL11A1-211ENST00000635193 JMJD7-PLA2G4BH0Y9G9 81 aa9.04□□□□□ -0.96
COL11A1-211ENST00000635193 RPL39P62891 51 aaKnown RBP9.04□□□□□ -0.96
COL11A1-211ENST00000635193 C19orf71A6NCJ1 209 aa9.04□□□□□ -0.96
COL11A1-211ENST00000635193 TMEM61Q8N0U2 210 aa9.04□□□□□ -0.96
COL11A1-211ENST00000635193 TIMM17AQ99595 171 aa9.04□□□□□ -0.96
COL11A1-211ENST00000635193 WI2-2373I1.2A0A1W2PRP0 233 aa9.04□□□□□ -0.96
COL11A1-211ENST00000635193 RNF223E7ERA6 249 aa9.04□□□□□ -0.96
COL11A1-211ENST00000635193 K7ENP7 123 aa9.04□□□□□ -0.96
COL11A1-211ENST00000635193 IGLV2-23P01705 113 aa9.04□□□□□ -0.96
COL11A1-211ENST00000635193 COX7B2Q8TF08 81 aa9.04□□□□□ -0.96
COL11A1-211ENST00000635193 SRCAPQ6ZRS2 3230 aa9.04□□□□□ -0.96
COL11A1-211ENST00000635193 GOLGB1Q14789 3259 aaKnown RBP9.04□□□□□ -0.96
COL11A1-211ENST00000635193 IGHV7-81A0A0B4J1V7 117 aa9.03□□□□□ -0.96
COL11A1-211ENST00000635193 F5H768 121 aa9.03□□□□□ -0.96
COL11A1-211ENST00000635193 MRPL36Q9P0J6 103 aaKnown RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms