RNA–Protein interactions for RNA: ENST00000634451.2

LINC00339-206, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-206ENST00000634451 HSPB11Q9Y547 144 aa8.4□□□□□ -1.06
LINC00339-206ENST00000634451 RBFOX3A6NFN3 312 aa8.39□□□□□ -1.07
LINC00339-206ENST00000634451 GCGP01275 180 aa8.39□□□□□ -1.07
LINC00339-206ENST00000634451 KCNS1Q96KK3 526 aa8.39□□□□□ -1.07
LINC00339-206ENST00000634451 TAS2R45P59539 299 aa8.38□□□□□ -1.07
LINC00339-206ENST00000634451 SYT8Q8NBV8 401 aa8.38□□□□□ -1.07
LINC00339-206ENST00000634451 PPP1R1CQ8WVI7 109 aa8.38□□□□□ -1.07
LINC00339-206ENST00000634451 IGKV2D-24A0A075B6R9 120 aa8.37□□□□□ -1.07
LINC00339-206ENST00000634451 TRAV8-3A0A0A6YYJ7 113 aa8.37□□□□□ -1.07
LINC00339-206ENST00000634451 IGKV3D-20A0A0C4DH25 116 aa8.37□□□□□ -1.07
LINC00339-206ENST00000634451 RNF222A6NCQ9 220 aa8.37□□□□□ -1.07
LINC00339-206ENST00000634451 TCRAP04437 139 aa8.37□□□□□ -1.07
LINC00339-206ENST00000634451 ARL14EPLP0DKL9 152 aa8.37□□□□□ -1.07
LINC00339-206ENST00000634451 MGST1P10620 155 aaKnown RBP8.37□□□□□ -1.07
LINC00339-206ENST00000634451 UFSP1Q6NVU6 142 aa8.37□□□□□ -1.07
LINC00339-206ENST00000634451 DAZAP1Q96EP5 407 aaKnown RBP8.37□□□□□ -1.07
LINC00339-206ENST00000634451 KLK12Q9UKR0 248 aa8.37□□□□□ -1.07
LINC00339-206ENST00000634451 PSG8Q9UQ74 426 aa8.37□□□□□ -1.07
LINC00339-206ENST00000634451 PRNTQ86SH4 94 aa8.36□□□□□ -1.07
LINC00339-206ENST00000634451 NIT1Q86X76 327 aa8.36□□□□□ -1.07
LINC00339-206ENST00000634451 LINC00479Q96M42 142 aa8.36□□□□□ -1.07
LINC00339-206ENST00000634451 TRAV34A0A0B4J273 112 aa8.35□□□□□ -1.07
LINC00339-206ENST00000634451 GGTLC3B5MD39 225 aa8.35□□□□□ -1.07
LINC00339-206ENST00000634451 MPC2O95563 127 aa8.35□□□□□ -1.07
LINC00339-206ENST00000634451 OXTP01178 125 aa8.35□□□□□ -1.07
LINC00339-206ENST00000634451 IFITM3Q01628 133 aa8.35□□□□□ -1.07
LINC00339-206ENST00000634451 ASAH1Q13510 395 aa8.35□□□□□ -1.07
LINC00339-206ENST00000634451 LGALSLQ3ZCW2 172 aaPredicted RBP8.35□□□□□ -1.07
LINC00339-206ENST00000634451 FAM74A1Q5RGS3 127 aa8.35□□□□□ -1.07
LINC00339-206ENST00000634451 CYB561D1Q8N8Q1 229 aa8.35□□□□□ -1.07
LINC00339-206ENST00000634451 SCGB1C1Q8TD33 95 aa8.35□□□□□ -1.07
LINC00339-206ENST00000634451 UBE2WQ96B02 151 aa8.35□□□□□ -1.07
LINC00339-206ENST00000634451 CCDC32Q9BV29 185 aa8.35□□□□□ -1.07
LINC00339-206ENST00000634451 A0A1W2PPV4 95 aa8.34□□□□□ -1.07
LINC00339-206ENST00000634451 PANO1I0J062 215 aa8.34□□□□□ -1.07
LINC00339-206ENST00000634451 TAAR5O14804 337 aa8.34□□□□□ -1.07
LINC00339-206ENST00000634451 RPL12P30050 165 aaKnown RBP8.34□□□□□ -1.07
LINC00339-206ENST00000634451 ACOT6Q3I5F7 207 aaPredicted RBP8.34□□□□□ -1.07
LINC00339-206ENST00000634451 DMRTA1Q5VZB9 504 aa8.34□□□□□ -1.07
LINC00339-206ENST00000634451 PQLC2Q6ZP29 291 aa8.34□□□□□ -1.07
LINC00339-206ENST00000634451 OR10G9Q8NGN4 311 aa8.34□□□□□ -1.07
LINC00339-206ENST00000634451 OR10G7Q8NGN6 311 aa8.34□□□□□ -1.07
LINC00339-206ENST00000634451 PTH2Q96A98 100 aa8.34□□□□□ -1.07
LINC00339-206ENST00000634451 NDFIP1Q9BT67 221 aa8.34□□□□□ -1.07
LINC00339-206ENST00000634451 H3BVH4 76 aa8.33□□□□□ -1.08
LINC00339-206ENST00000634451 MT1HL1P0DM35 61 aa8.33□□□□□ -1.08
LINC00339-206ENST00000634451 FLI1Q01543 452 aaPredicted RBP8.33□□□□□ -1.08
LINC00339-206ENST00000634451 Q8N976 141 aa8.33□□□□□ -1.08
LINC00339-206ENST00000634451 C5orf17Q8NAS9 161 aa8.33□□□□□ -1.08
LINC00339-206ENST00000634451 A0A087WWL8 130 aa8.32□□□□□ -1.08
LINC00339-206ENST00000634451 CIDEAO60543 219 aa8.32□□□□□ -1.08
LINC00339-206ENST00000634451 GCHFRP30047 84 aa8.32□□□□□ -1.08
LINC00339-206ENST00000634451 CDC34P49427 236 aaPredicted RBP8.32□□□□□ -1.08
LINC00339-206ENST00000634451 RPL37AP61513 92 aaKnown RBP8.32□□□□□ -1.08
LINC00339-206ENST00000634451 SUMO1P63165 101 aaKnown RBP8.32□□□□□ -1.08
LINC00339-206ENST00000634451 SMUG1Q53HV7 270 aa8.32□□□□□ -1.08
LINC00339-206ENST00000634451 TOR2AQ5JU69 321 aa8.32□□□□□ -1.08
LINC00339-206ENST00000634451 FAM74A4Q5TZK3 123 aa8.32□□□□□ -1.08
LINC00339-206ENST00000634451 MZT2BQ6NZ67 158 aa8.32□□□□□ -1.08
LINC00339-206ENST00000634451 ZFP2Q6ZN57 461 aa8.32□□□□□ -1.08
LINC00339-206ENST00000634451 ARL6IP6Q8N6S5 226 aa8.32□□□□□ -1.08
LINC00339-206ENST00000634451 ENKURQ8TC29 256 aa8.32□□□□□ -1.08
LINC00339-206ENST00000634451 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.32□□□□□ -1.08
LINC00339-206ENST00000634451 GRIFINA4D1Z8 144 aa8.31□□□□□ -1.08
LINC00339-206ENST00000634451 STAG3L2P0CL84 134 aa8.31□□□□□ -1.08
LINC00339-206ENST00000634451 STAG3L3P0CL85 134 aa8.31□□□□□ -1.08
LINC00339-206ENST00000634451 CRIP1P50238 77 aa8.31□□□□□ -1.08
LINC00339-206ENST00000634451 LRP2P98164 4655 aa8.31□□□□□ -1.08
LINC00339-206ENST00000634451 HSD17B11Q8NBQ5 300 aa8.31□□□□□ -1.08
LINC00339-206ENST00000634451 RAB24Q969Q5 203 aa8.31□□□□□ -1.08
LINC00339-206ENST00000634451 KRTAP3-3Q9BYR6 98 aa8.31□□□□□ -1.08
LINC00339-206ENST00000634451 KRTAP3-2Q9BYR7 98 aa8.31□□□□□ -1.08
LINC00339-206ENST00000634451 EPDR1Q9UM22 224 aa8.31□□□□□ -1.08
LINC00339-206ENST00000634451 A8MWV9 139 aa8.3□□□□□ -1.08
LINC00339-206ENST00000634451 INMT-MINDY4F8WBC2 141 aa8.3□□□□□ -1.08
LINC00339-206ENST00000634451 M0R036 132 aa8.3□□□□□ -1.08
LINC00339-206ENST00000634451 S100A4P26447 101 aaKnown RBP8.3□□□□□ -1.08
LINC00339-206ENST00000634451 ODF1Q14990 250 aa8.3□□□□□ -1.08
LINC00339-206ENST00000634451 ATRAIDQ6UW56 229 aa8.3□□□□□ -1.08
LINC00339-206ENST00000634451 ENHOQ6UWT2 76 aa8.3□□□□□ -1.08
LINC00339-206ENST00000634451 SUN5Q8TC36 379 aa8.3□□□□□ -1.08
LINC00339-206ENST00000634451 SH3BGRL3Q9H299 93 aa8.3□□□□□ -1.08
LINC00339-206ENST00000634451 BOLA1Q9Y3E2 137 aa8.3□□□□□ -1.08
LINC00339-206ENST00000634451 ARL2-SNX15V9GYD0 113 aa8.3□□□□□ -1.08
LINC00339-206ENST00000634451 RNF213Q63HN8 5207 aa8.3□□□□□ -1.08
LINC00339-206ENST00000634451 A0A087WWC5 75 aa8.29□□□□□ -1.08
LINC00339-206ENST00000634451 ASIPP42127 132 aa8.29□□□□□ -1.08
LINC00339-206ENST00000634451 CYCSP99999 105 aaKnown RBP8.29□□□□□ -1.08
LINC00339-206ENST00000634451 OR2G3Q8NGZ4 309 aa8.29□□□□□ -1.08
LINC00339-206ENST00000634451 RMI2Q96E14 147 aa8.29□□□□□ -1.08
LINC00339-206ENST00000634451 COX11Q9Y6N1 276 aa8.29□□□□□ -1.08
LINC00339-206ENST00000634451 URGCP-MRPS24S4R325 110 aa8.29□□□□□ -1.08
LINC00339-206ENST00000634451 TNXBP22105 4242 aa8.28□□□□□ -1.08
LINC00339-206ENST00000634451 TMSB15BA0A087X1C1 80 aa8.28□□□□□ -1.08
LINC00339-206ENST00000634451 SERTM2A0A1B0GWG4 89 aa8.28□□□□□ -1.08
LINC00339-206ENST00000634451 USP17L23D6RBM5 183 aa8.28□□□□□ -1.08
LINC00339-206ENST00000634451 SSNA1O43805 119 aa8.28□□□□□ -1.08
LINC00339-206ENST00000634451 PRSS1P07477 247 aa8.28□□□□□ -1.08
LINC00339-206ENST00000634451 ARMS2P0C7Q2 107 aa8.28□□□□□ -1.08
LINC00339-206ENST00000634451 ZFP69Q49AA0 526 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms