RNA–Protein interactions for RNA: ENST00000628516.1

LINC00628-201, long intergenic non-protein coding RNA 628, humanhuman

BASIC

Gene LINC00628, Length 1,289 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00628-201ENST00000628516 MED9Q9NWA0 146 aa11.34□□□□□ -0.59
LINC00628-201ENST00000628516 DNAH5Q8TE73 4624 aa11.34□□□□□ -0.59
LINC00628-201ENST00000628516 MUC4Q99102 2169 aa11.34□□□□□ -0.59
LINC00628-201ENST00000628516 ZNF415Q09FC8 603 aa11.33□□□□□ -0.6
LINC00628-201ENST00000628516 TOR2AQ5JU69 321 aa11.33□□□□□ -0.6
LINC00628-201ENST00000628516 ZNF506Q5JVG8 444 aa11.33□□□□□ -0.6
LINC00628-201ENST00000628516 BAGE2Q86Y30 109 aa11.33□□□□□ -0.6
LINC00628-201ENST00000628516 C11orf21Q9P2W6 132 aa11.33□□□□□ -0.6
LINC00628-201ENST00000628516 A0A1W2PPQ1 181 aa11.32□□□□□ -0.6
LINC00628-201ENST00000628516 PAX4O43316 350 aa11.32□□□□□ -0.6
LINC00628-201ENST00000628516 GNRH2O43555 120 aa11.32□□□□□ -0.6
LINC00628-201ENST00000628516 SDF2L1Q9HCN8 221 aa11.32□□□□□ -0.6
LINC00628-201ENST00000628516 TRGV11A0A075B6L2 103 aa11.31□□□□□ -0.6
LINC00628-201ENST00000628516 RAB19A4D1S5 217 aa11.31□□□□□ -0.6
LINC00628-201ENST00000628516 FABP5P3A8MUU1 101 aa11.31□□□□□ -0.6
LINC00628-201ENST00000628516 CRIP1P50238 77 aa11.31□□□□□ -0.6
LINC00628-201ENST00000628516 TDRG1Q3Y452 100 aa11.31□□□□□ -0.6
LINC00628-201ENST00000628516 COX8CQ7Z4L0 72 aa11.31□□□□□ -0.6
LINC00628-201ENST00000628516 EIF5A2Q9GZV4 153 aaKnown RBP11.31□□□□□ -0.6
LINC00628-201ENST00000628516 MDFICQ9P1T7 246 aa11.31□□□□□ -0.6
LINC00628-201ENST00000628516 PRO0255Q9UI72 69 aa11.31□□□□□ -0.6
LINC00628-201ENST00000628516 ICOSQ9Y6W8 199 aa11.31□□□□□ -0.6
LINC00628-201ENST00000628516 ABCA13Q86UQ4 5058 aa11.3□□□□□ -0.6
LINC00628-201ENST00000628516 SH2D1AO60880 128 aa11.3□□□□□ -0.6
LINC00628-201ENST00000628516 TYMSP04818 313 aa11.3□□□□□ -0.6
LINC00628-201ENST00000628516 SLAQ13239 276 aa11.3□□□□□ -0.6
LINC00628-201ENST00000628516 CENPWQ5EE01 88 aa11.3□□□□□ -0.6
LINC00628-201ENST00000628516 FAM162BQ5T6X4 162 aa11.3□□□□□ -0.6
LINC00628-201ENST00000628516 KCNS1Q96KK3 526 aa11.3□□□□□ -0.6
LINC00628-201ENST00000628516 FAM210AQ96ND0 272 aa11.3□□□□□ -0.6
LINC00628-201ENST00000628516 HHLA3Q9XRX5 114 aa11.3□□□□□ -0.6
LINC00628-201ENST00000628516 APOBP04114 4563 aaKnown RBP11.3□□□□□ -0.6
LINC00628-201ENST00000628516 IGHV3-16A0A0C4DH30 117 aa11.29□□□□□ -0.6
LINC00628-201ENST00000628516 CRYBA4P53673 196 aa11.29□□□□□ -0.6
LINC00628-201ENST00000628516 FHL2Q14192 279 aa11.29□□□□□ -0.6
LINC00628-201ENST00000628516 MLST8Q9BVC4 326 aa11.29□□□□□ -0.6
LINC00628-201ENST00000628516 M0R036 132 aa11.28□□□□□ -0.6
LINC00628-201ENST00000628516 SIVA1O15304 175 aa11.28□□□□□ -0.6
LINC00628-201ENST00000628516 ORM1P02763 201 aa11.28□□□□□ -0.6
LINC00628-201ENST00000628516 GNG4P50150 75 aa11.28□□□□□ -0.6
LINC00628-201ENST00000628516 CEBPGP53567 150 aa11.28□□□□□ -0.6
LINC00628-201ENST00000628516 ZNF674Q2M3X9 581 aa11.28□□□□□ -0.6
LINC00628-201ENST00000628516 SPATA12Q7Z6I5 190 aa11.28□□□□□ -0.6
LINC00628-201ENST00000628516 IGKV3D-20A0A0C4DH25 116 aa11.27□□□□□ -0.61
LINC00628-201ENST00000628516 TRGV4A0A0C4DH28 118 aa11.27□□□□□ -0.61
LINC00628-201ENST00000628516 B4DEV8 164 aa11.27□□□□□ -0.61
LINC00628-201ENST00000628516 TMEM250H0YL14 139 aa11.27□□□□□ -0.61
LINC00628-201ENST00000628516 NXPH4O95158 308 aa11.27□□□□□ -0.61
LINC00628-201ENST00000628516 SFTA3P0C7M3 94 aa11.27□□□□□ -0.61
LINC00628-201ENST00000628516 MGST1P10620 155 aaKnown RBP11.27□□□□□ -0.61
LINC00628-201ENST00000628516 BTF3P20290 206 aaKnown RBP11.27□□□□□ -0.61
LINC00628-201ENST00000628516 IFITM2Q01629 132 aa11.27□□□□□ -0.61
LINC00628-201ENST00000628516 MRPL23Q16540 153 aaKnown RBP11.27□□□□□ -0.61
LINC00628-201ENST00000628516 PRR27Q6MZM9 219 aa11.27□□□□□ -0.61
LINC00628-201ENST00000628516 SPXQ9BT56 116 aa11.27□□□□□ -0.61
LINC00628-201ENST00000628516 TRBV20OR9-2A0A075B6H5 130 aa11.26□□□□□ -0.61
LINC00628-201ENST00000628516 PGPEP1LA6NFU8 196 aa11.26□□□□□ -0.61
LINC00628-201ENST00000628516 IGLV2-8P01709 118 aa11.26□□□□□ -0.61
LINC00628-201ENST00000628516 LINC00315P59091 139 aa11.26□□□□□ -0.61
LINC00628-201ENST00000628516 RAB14P61106 215 aa11.26□□□□□ -0.61
LINC00628-201ENST00000628516 RASL10AQ92737 203 aa11.26□□□□□ -0.61
LINC00628-201ENST00000628516 ZNF479Q96JC4 524 aa11.26□□□□□ -0.61
LINC00628-201ENST00000628516 PARLQ9H300 379 aa11.26□□□□□ -0.61
LINC00628-201ENST00000628516 TMSB15BA0A087X1C1 80 aa11.25□□□□□ -0.61
LINC00628-201ENST00000628516 KRBOX1C9JBD0 128 aa11.25□□□□□ -0.61
LINC00628-201ENST00000628516 LYPD5Q6UWN5 251 aa11.25□□□□□ -0.61
LINC00628-201ENST00000628516 NEGR1Q7Z3B1 354 aa11.25□□□□□ -0.61
LINC00628-201ENST00000628516 GRIFINA4D1Z8 144 aa11.24□□□□□ -0.61
LINC00628-201ENST00000628516 CDK2AP2O75956 126 aa11.24□□□□□ -0.61
LINC00628-201ENST00000628516 SRP19P09132 144 aaKnown RBP11.24□□□□□ -0.61
LINC00628-201ENST00000628516 ASIPP42127 132 aa11.24□□□□□ -0.61
LINC00628-201ENST00000628516 SRSF3P84103 164 aaKnown RBP11.24□□□□□ -0.61
LINC00628-201ENST00000628516 LINC01559Q495D7 138 aa11.24□□□□□ -0.61
LINC00628-201ENST00000628516 K7EQD1 137 aa11.23□□□□□ -0.61
LINC00628-201ENST00000628516 S100A4P26447 101 aaKnown RBP11.23□□□□□ -0.61
LINC00628-201ENST00000628516 SRIP30626 198 aa11.23□□□□□ -0.61
LINC00628-201ENST00000628516 KRTAP10-2P60368 255 aa11.23□□□□□ -0.61
LINC00628-201ENST00000628516 SMIM12Q96EX1 92 aa11.23□□□□□ -0.61
LINC00628-201ENST00000628516 KRTAP4-5Q9BYR2 181 aa11.23□□□□□ -0.61
LINC00628-201ENST00000628516 TRAV4A0A0B4J268 109 aa11.22□□□□□ -0.61
LINC00628-201ENST00000628516 C9JCJ5 164 aa11.22□□□□□ -0.61
LINC00628-201ENST00000628516 C9JQL5 133 aa11.22□□□□□ -0.61
LINC00628-201ENST00000628516 M0R2P5 195 aa11.22□□□□□ -0.61
LINC00628-201ENST00000628516 NDUFS6O75380 124 aaKnown RBP11.22□□□□□ -0.61
LINC00628-201ENST00000628516 RNASE3P12724 160 aaKnown RBP11.22□□□□□ -0.61
LINC00628-201ENST00000628516 GYPEP15421 78 aa11.22□□□□□ -0.61
LINC00628-201ENST00000628516 RPL19P84098 196 aaKnown RBP11.22□□□□□ -0.61
LINC00628-201ENST00000628516 PEA15Q15121 130 aa11.22□□□□□ -0.61
LINC00628-201ENST00000628516 OR4C5Q8NGB2 326 aa11.22□□□□□ -0.61
LINC00628-201ENST00000628516 C9orf85Q96MD7 179 aa11.22□□□□□ -0.61
LINC00628-201ENST00000628516 H3BVH4 76 aa11.21□□□□□ -0.61
LINC00628-201ENST00000628516 CLLU1Q5K131 121 aa11.21□□□□□ -0.61
LINC00628-201ENST00000628516 Q6ZRN7 208 aaPredicted RBP11.21□□□□□ -0.61
LINC00628-201ENST00000628516 OCC1Q8TAD7 63 aa11.21□□□□□ -0.61
LINC00628-201ENST00000628516 DAZAP1Q96EP5 407 aaKnown RBP11.21□□□□□ -0.61
LINC00628-201ENST00000628516 SMIM7Q9BQ49 75 aa11.21□□□□□ -0.61
LINC00628-201ENST00000628516 K7EN84 100 aa11.2□□□□□ -0.62
LINC00628-201ENST00000628516 MAPKAPK5-AS1Q8N8E1 139 aa11.2□□□□□ -0.62
LINC00628-201ENST00000628516 BIN3Q9NQY0 253 aa11.2□□□□□ -0.62
LINC00628-201ENST00000628516 TRAV9-2A0A087WT02 112 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms