RNA–Protein interactions for RNA: ENST00000623342.1

SND1-IT1-201, SND1 intronic transcript 1, humanhuman

BASIC

Gene SND1-IT1, Length 2,481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1-201ENST00000623342 PRSS1P07477 247 aa6.26□□□□□ -1.41
SND1-IT1-201ENST00000623342 SMIM17P0DL12 118 aa6.26□□□□□ -1.41
SND1-IT1-201ENST00000623342 ODF1Q14990 250 aa6.26□□□□□ -1.41
SND1-IT1-201ENST00000623342 PSMG4Q5JS54 123 aa6.26□□□□□ -1.41
SND1-IT1-201ENST00000623342 BOD1L2Q8IYS8 172 aa6.26□□□□□ -1.41
SND1-IT1-201ENST00000623342 DCANP1Q8TF63 244 aa6.26□□□□□ -1.41
SND1-IT1-201ENST00000623342 SELENOKQ9Y6D0 94 aa6.26□□□□□ -1.41
SND1-IT1-201ENST00000623342 ATP5LO75964 103 aa6.26□□□□□ -1.41
SND1-IT1-201ENST00000623342 KIR3DS1Q14943 382 aa6.26□□□□□ -1.41
SND1-IT1-201ENST00000623342 C10orf99Q6UWK7 81 aa6.26□□□□□ -1.41
SND1-IT1-201ENST00000623342 DPH3P1Q9H4G8 78 aa6.26□□□□□ -1.41
SND1-IT1-201ENST00000623342 ZMAT4Q9H898 229 aa6.26□□□□□ -1.41
SND1-IT1-201ENST00000623342 OTOGQ6ZRI0 2925 aa6.26□□□□□ -1.41
SND1-IT1-201ENST00000623342 KLLNB2CW77 178 aa6.25□□□□□ -1.41
SND1-IT1-201ENST00000623342 GNRH2O43555 120 aa6.25□□□□□ -1.41
SND1-IT1-201ENST00000623342 MYOZ3Q8TDC0 251 aa6.25□□□□□ -1.41
SND1-IT1-201ENST00000623342 VPREB3Q9UKI3 123 aa6.25□□□□□ -1.41
SND1-IT1-201ENST00000623342 TAX1BP3O14907 124 aa6.25□□□□□ -1.41
SND1-IT1-201ENST00000623342 SIVA1O15304 175 aa6.25□□□□□ -1.41
SND1-IT1-201ENST00000623342 SPRY2O43597 315 aa6.25□□□□□ -1.41
SND1-IT1-201ENST00000623342 RNASE3P12724 160 aaKnown RBP6.25□□□□□ -1.41
SND1-IT1-201ENST00000623342 C14orf178Q8N769 122 aaPredicted RBP6.25□□□□□ -1.41
SND1-IT1-201ENST00000623342 OR9G4Q8NGQ1 327 aa6.25□□□□□ -1.41
SND1-IT1-201ENST00000623342 FOXC2Q99958 501 aa6.25□□□□□ -1.41
SND1-IT1-201ENST00000623342 SMIM2Q9BVW6 85 aa6.25□□□□□ -1.41
SND1-IT1-201ENST00000623342 CR1P17927 2039 aa6.25□□□□□ -1.41
SND1-IT1-201ENST00000623342 RNF223E7ERA6 249 aa6.24□□□□□ -1.41
SND1-IT1-201ENST00000623342 FSHBP01225 129 aa6.24□□□□□ -1.41
SND1-IT1-201ENST00000623342 IGKCP01834 107 aa6.24□□□□□ -1.41
SND1-IT1-201ENST00000623342 NMUP48645 174 aa6.24□□□□□ -1.41
SND1-IT1-201ENST00000623342 PTTG1IPP53801 180 aa6.24□□□□□ -1.41
SND1-IT1-201ENST00000623342 TCTAP57738 103 aa6.24□□□□□ -1.41
SND1-IT1-201ENST00000623342 UBE2V1Q13404 147 aa6.24□□□□□ -1.41
SND1-IT1-201ENST00000623342 TMEM97Q5BJF2 176 aa6.24□□□□□ -1.41
SND1-IT1-201ENST00000623342 RASL10AQ92737 203 aa6.24□□□□□ -1.41
SND1-IT1-201ENST00000623342 AP1S3Q96PC3 154 aa6.24□□□□□ -1.41
SND1-IT1-201ENST00000623342 C20orf78Q9BR46 151 aa6.24□□□□□ -1.41
SND1-IT1-201ENST00000623342 CCL25O15444 150 aa6.24□□□□□ -1.41
SND1-IT1-201ENST00000623342 DPM2O94777 84 aa6.24□□□□□ -1.41
SND1-IT1-201ENST00000623342 SUMO2P61956 95 aaKnown RBP6.24□□□□□ -1.41
SND1-IT1-201ENST00000623342 FAM159AQ6UWV7 190 aa6.24□□□□□ -1.41
SND1-IT1-201ENST00000623342 Q6YL49 198 aa6.24□□□□□ -1.41
SND1-IT1-201ENST00000623342 HHLA3Q9XRX5 114 aa6.24□□□□□ -1.41
SND1-IT1-201ENST00000623342 NXPH4O95158 308 aa6.23□□□□□ -1.41
SND1-IT1-201ENST00000623342 ELANEP08246 267 aa6.23□□□□□ -1.41
SND1-IT1-201ENST00000623342 MGPP08493 103 aa6.23□□□□□ -1.41
SND1-IT1-201ENST00000623342 LGALS1P09382 135 aaKnown RBP6.23□□□□□ -1.41
SND1-IT1-201ENST00000623342 IGHV4-31P0DP07 118 aa6.23□□□□□ -1.41
SND1-IT1-201ENST00000623342 SEC11AP67812 179 aa6.23□□□□□ -1.41
SND1-IT1-201ENST00000623342 ORMDL2Q53FV1 153 aa6.23□□□□□ -1.41
SND1-IT1-201ENST00000623342 PCP2Q8IVA1 136 aa6.23□□□□□ -1.41
SND1-IT1-201ENST00000623342 C7orf71A4D174 169 aa6.23□□□□□ -1.41
SND1-IT1-201ENST00000623342 K7EMI3 77 aa6.23□□□□□ -1.41
SND1-IT1-201ENST00000623342 PPP1R17O96001 155 aa6.23□□□□□ -1.41
SND1-IT1-201ENST00000623342 SNRPD3P62318 126 aaKnown RBP6.23□□□□□ -1.41
SND1-IT1-201ENST00000623342 RPL39LQ96EH5 51 aaKnown RBP6.23□□□□□ -1.41
SND1-IT1-201ENST00000623342 ODF3Q96PU9 254 aa6.23□□□□□ -1.41
SND1-IT1-201ENST00000623342 ZNF702PQ9H963 129 aa6.23□□□□□ -1.41
SND1-IT1-201ENST00000623342 LGALS9O00182 355 aa6.22□□□□□ -1.41
SND1-IT1-201ENST00000623342 ZNF688P0C7X2 276 aa6.22□□□□□ -1.41
SND1-IT1-201ENST00000623342 HSD52Q0P140 79 aa6.22□□□□□ -1.41
SND1-IT1-201ENST00000623342 VAMP3Q15836 100 aa6.22□□□□□ -1.41
SND1-IT1-201ENST00000623342 POM121L12Q8N7R1 296 aa6.22□□□□□ -1.41
SND1-IT1-201ENST00000623342 IGHV4OR15-8A0A075B7B6 117 aa6.22□□□□□ -1.41
SND1-IT1-201ENST00000623342 A0A087WW49 117 aa6.22□□□□□ -1.41
SND1-IT1-201ENST00000623342 A0A087WX48 190 aa6.22□□□□□ -1.41
SND1-IT1-201ENST00000623342 TRAV12-3A0A0B4J271 114 aa6.22□□□□□ -1.41
SND1-IT1-201ENST00000623342 CBY3A6NI87 242 aa6.22□□□□□ -1.41
SND1-IT1-201ENST00000623342 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.22□□□□□ -1.41
SND1-IT1-201ENST00000623342 K7EQG2 157 aa6.22□□□□□ -1.41
SND1-IT1-201ENST00000623342 SYNJ2BPP57105 145 aa6.22□□□□□ -1.41
SND1-IT1-201ENST00000623342 ADAMTSL5Q6ZMM2 481 aa6.22□□□□□ -1.41
SND1-IT1-201ENST00000623342 WFDC12Q8WWY7 111 aa6.22□□□□□ -1.41
SND1-IT1-201ENST00000623342 UBE2E2Q96LR5 201 aa6.22□□□□□ -1.41
SND1-IT1-201ENST00000623342 BEX4Q9NWD9 120 aaPredicted RBP6.22□□□□□ -1.41
SND1-IT1-201ENST00000623342 MRPL35Q9NZE8 188 aaKnown RBP6.22□□□□□ -1.41
SND1-IT1-201ENST00000623342 IGKV2D-26A0A0A0MRZ7 120 aa6.21□□□□□ -1.41
SND1-IT1-201ENST00000623342 A0A0J9YX75 114 aa6.21□□□□□ -1.41
SND1-IT1-201ENST00000623342 HOXA3O43365 443 aaPredicted RBP6.21□□□□□ -1.41
SND1-IT1-201ENST00000623342 CD7P09564 240 aa6.21□□□□□ -1.41
SND1-IT1-201ENST00000623342 DEFB113Q30KQ7 82 aa6.21□□□□□ -1.41
SND1-IT1-201ENST00000623342 ZC2HC1BQ5TFG8 222 aa6.21□□□□□ -1.41
SND1-IT1-201ENST00000623342 TOMM6Q96B49 74 aa6.21□□□□□ -1.41
SND1-IT1-201ENST00000623342 TMEM160Q9NX00 188 aa6.21□□□□□ -1.41
SND1-IT1-201ENST00000623342 KIF25-AS1Q9Y6Z4 181 aa6.21□□□□□ -1.41
SND1-IT1-201ENST00000623342 TRAV12-1A0A0B4J245 112 aa6.21□□□□□ -1.42
SND1-IT1-201ENST00000623342 A6NDN8 102 aa6.21□□□□□ -1.42
SND1-IT1-201ENST00000623342 HOXD3P31249 432 aaPredicted RBP6.21□□□□□ -1.42
SND1-IT1-201ENST00000623342 ERASQ7Z444 233 aa6.21□□□□□ -1.42
SND1-IT1-201ENST00000623342 GTSCR1Q86UQ5 136 aa6.21□□□□□ -1.42
SND1-IT1-201ENST00000623342 RNF152Q8N8N0 203 aa6.21□□□□□ -1.42
SND1-IT1-201ENST00000623342 SCGB3A1Q96QR1 104 aa6.21□□□□□ -1.42
SND1-IT1-201ENST00000623342 HLA-DRB4P13762 266 aa6.2□□□□□ -1.42
SND1-IT1-201ENST00000623342 PLNP26678 52 aa6.2□□□□□ -1.42
SND1-IT1-201ENST00000623342 LINC00315P59091 139 aa6.2□□□□□ -1.42
SND1-IT1-201ENST00000623342 Q5PR19 223 aa6.2□□□□□ -1.42
SND1-IT1-201ENST00000623342 LRRC75A-AS1Q8N1F1 130 aa6.2□□□□□ -1.42
SND1-IT1-201ENST00000623342 HLA-DRB4X5D2U9 266 aa6.2□□□□□ -1.42
SND1-IT1-201ENST00000623342 H7C1H1 209 aa6.2□□□□□ -1.42
SND1-IT1-201ENST00000623342 DUSP14O95147 198 aaKnown RBP6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms