RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 VCX2Q9H322 139 aa10.72□□□□□ -0.69
LDB3-209ENST00000623056 C11orf86A6NJI1 115 aa10.72□□□□□ -0.69
LDB3-209ENST00000623056 LY6HO94772 140 aa10.72□□□□□ -0.69
LDB3-209ENST00000623056 MGPP08493 103 aa10.72□□□□□ -0.69
LDB3-209ENST00000623056 ZNF688P0C7X2 276 aa10.72□□□□□ -0.69
LDB3-209ENST00000623056 CLEC19AQ6UXS0 136 aa10.72□□□□□ -0.69
LDB3-209ENST00000623056 CCDC140Q96MF4 163 aa10.72□□□□□ -0.69
LDB3-209ENST00000623056 TLN1Q9Y490 2541 aaKnown RBP10.71□□□□□ -0.69
LDB3-209ENST00000623056 RELNP78509 3460 aa10.71□□□□□ -0.69
LDB3-209ENST00000623056 IGLV4-69A0A075B6H9 119 aa10.71□□□□□ -0.69
LDB3-209ENST00000623056 DUSP14O95147 198 aaKnown RBP10.71□□□□□ -0.69
LDB3-209ENST00000623056 TGFAP01135 160 aa10.71□□□□□ -0.69
LDB3-209ENST00000623056 EBI3Q14213 229 aa10.71□□□□□ -0.69
LDB3-209ENST00000623056 ANKRD29Q8N6D5 301 aa10.71□□□□□ -0.69
LDB3-209ENST00000623056 Q8N9W7 124 aa10.71□□□□□ -0.69
LDB3-209ENST00000623056 KIR2DL4Q99706 377 aa10.71□□□□□ -0.69
LDB3-209ENST00000623056 CFC1BP0CG36 223 aa10.7□□□□□ -0.7
LDB3-209ENST00000623056 CFC1P0CG37 223 aa10.7□□□□□ -0.7
LDB3-209ENST00000623056 EMP1P54849 157 aa10.7□□□□□ -0.7
LDB3-209ENST00000623056 Q6ZS46 218 aa10.7□□□□□ -0.7
LDB3-209ENST00000623056 METTL26Q96S19 204 aa10.7□□□□□ -0.7
LDB3-209ENST00000623056 DCHS2Q6V1P9 2916 aa10.7□□□□□ -0.7
LDB3-209ENST00000623056 IGHV3-30P01768 117 aa10.7□□□□□ -0.7
LDB3-209ENST00000623056 IGHV3-30-5P0DP03 117 aa10.7□□□□□ -0.7
LDB3-209ENST00000623056 TSHBP01222 138 aa10.69□□□□□ -0.7
LDB3-209ENST00000623056 S100A4P26447 101 aaKnown RBP10.69□□□□□ -0.7
LDB3-209ENST00000623056 HERVK_113P61574 105 aa10.69□□□□□ -0.7
LDB3-209ENST00000623056 C10orf126Q8N4M7 172 aa10.69□□□□□ -0.7
LDB3-209ENST00000623056 C16orf92Q96LL3 132 aa10.69□□□□□ -0.7
LDB3-209ENST00000623056 ANAPC13Q9BS18 74 aa10.69□□□□□ -0.7
LDB3-209ENST00000623056 PHLDA3Q9Y5J5 127 aa10.69□□□□□ -0.7
LDB3-209ENST00000623056 ATP6V0E1O15342 81 aa10.68□□□□□ -0.7
LDB3-209ENST00000623056 ASIPP42127 132 aa10.68□□□□□ -0.7
LDB3-209ENST00000623056 TSPEAR-AS2P59090 65 aa10.68□□□□□ -0.7
LDB3-209ENST00000623056 GPHB5Q86YW7 130 aa10.68□□□□□ -0.7
LDB3-209ENST00000623056 C20orf173Q96LM9 149 aa10.68□□□□□ -0.7
LDB3-209ENST00000623056 CACNA1BQ00975 2339 aa10.68□□□□□ -0.7
LDB3-209ENST00000623056 SCGB1C2P0DMR2 95 aa10.68□□□□□ -0.7
LDB3-209ENST00000623056 ZFAND6Q6FIF0 208 aa10.68□□□□□ -0.7
LDB3-209ENST00000623056 ZFAND2AQ8N6M9 145 aa10.68□□□□□ -0.7
LDB3-209ENST00000623056 U3KQE9 123 aa10.68□□□□□ -0.7
LDB3-209ENST00000623056 LRBAP50851 2863 aa10.68□□□□□ -0.7
LDB3-209ENST00000623056 OOSP1A8MZH6 123 aa10.67□□□□□ -0.7
LDB3-209ENST00000623056 KLK9Q2XQG4 91 aa10.67□□□□□ -0.7
LDB3-209ENST00000623056 PAPPA-AS1Q5QFB9 102 aa10.67□□□□□ -0.7
LDB3-209ENST00000623056 SLC25A29Q8N8R3 303 aa10.67□□□□□ -0.7
LDB3-209ENST00000623056 LINC01560Q8TB33 94 aa10.67□□□□□ -0.7
LDB3-209ENST00000623056 ITLN2Q8WWU7 325 aaPredicted RBP10.67□□□□□ -0.7
LDB3-209ENST00000623056 PRO1854Q9UHT4 67 aa10.67□□□□□ -0.7
LDB3-209ENST00000623056 KLK9Q9UKQ9 250 aa10.67□□□□□ -0.7
LDB3-209ENST00000623056 TP53TG1Q9Y2A0 90 aa10.67□□□□□ -0.7
LDB3-209ENST00000623056 LENEPQ9Y5L5 61 aa10.67□□□□□ -0.7
LDB3-209ENST00000623056 TRAV21A0A0B4J279 112 aa10.67□□□□□ -0.7
LDB3-209ENST00000623056 TMEM262E9PQX1 116 aa10.67□□□□□ -0.7
LDB3-209ENST00000623056 ABCA4P78363 2273 aa10.66□□□□□ -0.7
LDB3-209ENST00000623056 IGIPA6NJ69 53 aa10.66□□□□□ -0.7
LDB3-209ENST00000623056 G3V318 75 aa10.66□□□□□ -0.7
LDB3-209ENST00000623056 PMVKQ15126 192 aa10.66□□□□□ -0.7
LDB3-209ENST00000623056 ANXA2RQ3ZCQ2 193 aa10.66□□□□□ -0.7
LDB3-209ENST00000623056 TEX29Q8N6K0 151 aa10.66□□□□□ -0.7
LDB3-209ENST00000623056 CITED1Q99966 193 aa10.66□□□□□ -0.7
LDB3-209ENST00000623056 IGHV1-69DA0A0B4J2H0 117 aa10.66□□□□□ -0.7
LDB3-209ENST00000623056 PPP1R17O96001 155 aa10.66□□□□□ -0.7
LDB3-209ENST00000623056 DEFB104AQ8WTQ1 72 aa10.66□□□□□ -0.7
LDB3-209ENST00000623056 EEF1AKMT3Q96AZ1 226 aa10.66□□□□□ -0.7
LDB3-209ENST00000623056 TIMD4Q96H15 378 aa10.66□□□□□ -0.7
LDB3-209ENST00000623056 SS18L2Q9UHA2 77 aa10.66□□□□□ -0.7
LDB3-209ENST00000623056 ACACBO00763 2458 aa10.65□□□□□ -0.7
LDB3-209ENST00000623056 SLC25A20O43772 301 aa10.65□□□□□ -0.7
LDB3-209ENST00000623056 MINOS1Q5TGZ0 78 aa10.65□□□□□ -0.7
LDB3-209ENST00000623056 C9orf139Q6ZV77 190 aa10.65□□□□□ -0.7
LDB3-209ENST00000623056 MINOS1-NBL1R4GNA1 71 aa10.65□□□□□ -0.7
LDB3-209ENST00000623056 CHD8Q9HCK8 2581 aa10.65□□□□□ -0.7
LDB3-209ENST00000623056 SPTA1P02549 2419 aa10.65□□□□□ -0.7
LDB3-209ENST00000623056 TMEM170BQ5T4T1 132 aa10.64□□□□□ -0.71
LDB3-209ENST00000623056 LINC00477Q96M19 166 aa10.64□□□□□ -0.71
LDB3-209ENST00000623056 AMELXQ99217 191 aa10.64□□□□□ -0.71
LDB3-209ENST00000623056 FAM90A27PA6NNH2 459 aa10.64□□□□□ -0.71
LDB3-209ENST00000623056 GNRH2O43555 120 aa10.64□□□□□ -0.71
LDB3-209ENST00000623056 MED14OSP0DP75 135 aa10.64□□□□□ -0.71
LDB3-209ENST00000623056 CRIP2P52943 208 aaPredicted RBP10.64□□□□□ -0.71
LDB3-209ENST00000623056 DEFB1P60022 68 aa10.64□□□□□ -0.71
LDB3-209ENST00000623056 RPL39P62891 51 aaKnown RBP10.64□□□□□ -0.71
LDB3-209ENST00000623056 AJUBAQ96IF1 538 aa10.64□□□□□ -0.71
LDB3-209ENST00000623056 KMT2BQ9UMN6 2715 aaPredicted RBP10.64□□□□□ -0.71
LDB3-209ENST00000623056 SVEP1Q4LDE5 3571 aa10.64□□□□□ -0.71
LDB3-209ENST00000623056 ATRXP46100 2492 aa10.64□□□□□ -0.71
LDB3-209ENST00000623056 TRBV7-1A0A0A6YYK4 115 aa10.63□□□□□ -0.71
LDB3-209ENST00000623056 C9JAW5 83 aa10.63□□□□□ -0.71
LDB3-209ENST00000623056 GAGE5Q13069 117 aa10.63□□□□□ -0.71
LDB3-209ENST00000623056 GAGE6Q13070 117 aa10.63□□□□□ -0.71
LDB3-209ENST00000623056 TRPT1Q86TN4 253 aaKnown RBP10.63□□□□□ -0.71
LDB3-209ENST00000623056 OR10J6PQ8NGY7 276 aa10.63□□□□□ -0.71
LDB3-209ENST00000623056 ZNRF2Q8NHG8 242 aa10.63□□□□□ -0.71
LDB3-209ENST00000623056 RAX2Q96IS3 184 aa10.63□□□□□ -0.71
LDB3-209ENST00000623056 ANKHD1Q8IWZ3 2542 aaKnown RBP10.63□□□□□ -0.71
LDB3-209ENST00000623056 RNASE3P12724 160 aaKnown RBP10.63□□□□□ -0.71
LDB3-209ENST00000623056 RNASE4P34096 147 aaKnown RBP10.63□□□□□ -0.71
LDB3-209ENST00000623056 ARL3P36405 182 aa10.63□□□□□ -0.71
LDB3-209ENST00000623056 POM121L12Q8N7R1 296 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms