RNA–Protein interactions for RNA: ENST00000621526.4

CPNE3-211, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 279 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-211ENST00000621526 RAB2BQ8WUD1 216 aa1.36□□□□□ -2.19
CPNE3-211ENST00000621526 MITD1Q8WV92 249 aa1.36□□□□□ -2.19
CPNE3-211ENST00000621526 ASB13Q8WXK3 278 aa1.36□□□□□ -2.19
CPNE3-211ENST00000621526 RPL36ALQ969Q0 106 aaKnown RBP1.36□□□□□ -2.19
CPNE3-211ENST00000621526 GGACTQ9BVM4 153 aa1.36□□□□□ -2.19
CPNE3-211ENST00000621526 GFRA4Q9GZZ7 299 aa1.36□□□□□ -2.19
CPNE3-211ENST00000621526 PARLQ9H300 379 aa1.36□□□□□ -2.19
CPNE3-211ENST00000621526 NAA60Q9H7X0 242 aa1.36□□□□□ -2.19
CPNE3-211ENST00000621526 TXNL4BQ9NX01 149 aaKnown RBP1.36□□□□□ -2.19
CPNE3-211ENST00000621526 GPR132Q9UNW8 380 aa1.36□□□□□ -2.19
CPNE3-211ENST00000621526 STRAPQ9Y3F4 350 aaKnown RBP1.36□□□□□ -2.19
CPNE3-211ENST00000621526 A0A087WZ39 114 aa1.35□□□□□ -2.19
CPNE3-211ENST00000621526 GVQW2A0A096LPI5 108 aaPredicted RBP1.35□□□□□ -2.19
CPNE3-211ENST00000621526 DUXBA0A1W2PPF3 345 aa1.35□□□□□ -2.19
CPNE3-211ENST00000621526 FAM24AA6NFZ4 105 aa1.35□□□□□ -2.19
CPNE3-211ENST00000621526 AGPAT2O15120 278 aa1.35□□□□□ -2.19
CPNE3-211ENST00000621526 ZNF861PO60384 105 aa1.35□□□□□ -2.19
CPNE3-211ENST00000621526 CIB2O75838 187 aa1.35□□□□□ -2.19
CPNE3-211ENST00000621526 GNAO1P09471 354 aa1.35□□□□□ -2.19
CPNE3-211ENST00000621526 NBEAP1P0C6P0 100 aa1.35□□□□□ -2.19
CPNE3-211ENST00000621526 SDC2P34741 201 aa1.35□□□□□ -2.19
CPNE3-211ENST00000621526 CYCSP99999 105 aaKnown RBP1.35□□□□□ -2.19
CPNE3-211ENST00000621526 ID3Q02535 119 aa1.35□□□□□ -2.19
CPNE3-211ENST00000621526 KRTAP13-3Q3SY46 172 aa1.35□□□□□ -2.19
CPNE3-211ENST00000621526 C9orf116Q5BN46 136 aaPredicted RBP1.35□□□□□ -2.19
CPNE3-211ENST00000621526 RNASE10Q5GAN6 216 aaKnown RBP1.35□□□□□ -2.19
CPNE3-211ENST00000621526 ZNF506Q5JVG8 444 aa1.35□□□□□ -2.19
CPNE3-211ENST00000621526 SPANXN5Q5MJ07 72 aa1.35□□□□□ -2.19
CPNE3-211ENST00000621526 IZUMO2Q6UXV1 221 aa1.35□□□□□ -2.19
CPNE3-211ENST00000621526 LYZL2Q7Z4W2 148 aa1.35□□□□□ -2.19
CPNE3-211ENST00000621526 EXOC3-AS1Q8N2X6 119 aa1.35□□□□□ -2.19
CPNE3-211ENST00000621526 C14orf178Q8N769 122 aaPredicted RBP1.35□□□□□ -2.19
CPNE3-211ENST00000621526 C15orf56Q8N910 161 aa1.35□□□□□ -2.19
CPNE3-211ENST00000621526 C15orf40Q8WUR7 153 aa1.35□□□□□ -2.19
CPNE3-211ENST00000621526 TVP23CQ96ET8 276 aa1.35□□□□□ -2.19
CPNE3-211ENST00000621526 LINC00526Q96FQ7 95 aa1.35□□□□□ -2.19
CPNE3-211ENST00000621526 SMIM8Q96KF7 97 aa1.35□□□□□ -2.19
CPNE3-211ENST00000621526 SCGB3A2Q96PL1 93 aa1.35□□□□□ -2.19
CPNE3-211ENST00000621526 PFDN5Q99471 154 aa1.35□□□□□ -2.19
CPNE3-211ENST00000621526 KIR2DL4Q99706 377 aa1.35□□□□□ -2.19
CPNE3-211ENST00000621526 CHCHD5Q9BSY4 110 aa1.35□□□□□ -2.19
CPNE3-211ENST00000621526 GPN1Q9HCN4 374 aaPredicted RBP1.35□□□□□ -2.19
CPNE3-211ENST00000621526 S100A14Q9HCY8 104 aa1.35□□□□□ -2.19
CPNE3-211ENST00000621526 COMMD3Q9UBI1 195 aa1.35□□□□□ -2.19
CPNE3-211ENST00000621526 RABL2AQ9UBK7 228 aaPredicted RBP1.35□□□□□ -2.19
CPNE3-211ENST00000621526 PAIP2BQ9ULR5 123 aaKnown RBP1.35□□□□□ -2.19
CPNE3-211ENST00000621526 RABL2BQ9UNT1 228 aa1.35□□□□□ -2.19
CPNE3-211ENST00000621526 C14orf166Q9Y224 244 aaKnown RBP1.35□□□□□ -2.19
CPNE3-211ENST00000621526 IGKV2-40A0A087WW87 121 aaPredicted RBP1.34□□□□□ -2.19
CPNE3-211ENST00000621526 TRAV34A0A0B4J273 112 aa1.34□□□□□ -2.19
CPNE3-211ENST00000621526 LOC107984640A0A0U1RRK4 108 aa1.34□□□□□ -2.19
CPNE3-211ENST00000621526 SMCO3A2RU48 225 aa1.34□□□□□ -2.19
CPNE3-211ENST00000621526 F5H697 171 aa1.34□□□□□ -2.19
CPNE3-211ENST00000621526 PTTG1O95997 202 aa1.34□□□□□ -2.19
CPNE3-211ENST00000621526 IGKV2D-40P01614 121 aaPredicted RBP1.34□□□□□ -2.19
CPNE3-211ENST00000621526 APOA1P02647 267 aa1.34□□□□□ -2.19
CPNE3-211ENST00000621526 CD3DP04234 171 aa1.34□□□□□ -2.19
CPNE3-211ENST00000621526 IAPPP10997 89 aa1.34□□□□□ -2.19
CPNE3-211ENST00000621526 ANXA3P12429 323 aa1.34□□□□□ -2.19
CPNE3-211ENST00000621526 RNASE3P12724 160 aaKnown RBP1.34□□□□□ -2.19
CPNE3-211ENST00000621526 RPL29P47914 159 aaKnown RBP1.34□□□□□ -2.19
CPNE3-211ENST00000621526 TAS2R30P59541 319 aa1.34□□□□□ -2.19
CPNE3-211ENST00000621526 S100A10P60903 97 aa1.34□□□□□ -2.19
CPNE3-211ENST00000621526 RAB4BP61018 213 aa1.34□□□□□ -2.19
CPNE3-211ENST00000621526 GNGT1P63211 74 aa1.34□□□□□ -2.19
CPNE3-211ENST00000621526 SSBP1Q04837 148 aaKnown RBP1.34□□□□□ -2.19
CPNE3-211ENST00000621526 SYCNQ0VAF6 134 aa1.34□□□□□ -2.19
CPNE3-211ENST00000621526 IQCJQ1A5X6 159 aa1.34□□□□□ -2.19
CPNE3-211ENST00000621526 RNF151Q2KHN1 245 aa1.34□□□□□ -2.19
CPNE3-211ENST00000621526 LGALSLQ3ZCW2 172 aaPredicted RBP1.34□□□□□ -2.19
CPNE3-211ENST00000621526 UBE2NLQ5JXB2 153 aa1.34□□□□□ -2.19
CPNE3-211ENST00000621526 DNLZQ5SXM8 178 aa1.34□□□□□ -2.19
CPNE3-211ENST00000621526 XP32Q5T750 250 aa1.34□□□□□ -2.19
CPNE3-211ENST00000621526 EIF5AL1Q6IS14 154 aaKnown RBP1.34□□□□□ -2.19
CPNE3-211ENST00000621526 PRR27Q6MZM9 219 aa1.34□□□□□ -2.19
CPNE3-211ENST00000621526 SPAG11AQ6PDA7 123 aa1.34□□□□□ -2.19
CPNE3-211ENST00000621526 TMEM14EPQ6UXP3 125 aa1.34□□□□□ -2.19
CPNE3-211ENST00000621526 NTM-AS1Q6ZSK4 140 aa1.34□□□□□ -2.19
CPNE3-211ENST00000621526 C20orf203Q8NBC4 194 aa1.34□□□□□ -2.19
CPNE3-211ENST00000621526 TMEM229BQ8NBD8 167 aa1.34□□□□□ -2.19
CPNE3-211ENST00000621526 SFRP2Q96HF1 295 aa1.34□□□□□ -2.19
CPNE3-211ENST00000621526 DIRAS2Q96HU8 199 aa1.34□□□□□ -2.19
CPNE3-211ENST00000621526 RETNLBQ9BQ08 111 aa1.34□□□□□ -2.19
CPNE3-211ENST00000621526 SLIRPQ9GZT3 109 aaKnown RBP1.34□□□□□ -2.19
CPNE3-211ENST00000621526 NAA50Q9GZZ1 169 aaKnown RBP1.34□□□□□ -2.19
CPNE3-211ENST00000621526 MED28Q9H204 178 aa1.34□□□□□ -2.19
CPNE3-211ENST00000621526 TREM1Q9NP99 234 aa1.34□□□□□ -2.19
CPNE3-211ENST00000621526 LYRM2Q9NU23 88 aaPredicted RBP1.34□□□□□ -2.19
CPNE3-211ENST00000621526 MGAT4CQ9UBM8 478 aa1.34□□□□□ -2.19
CPNE3-211ENST00000621526 MTFP1Q9UDX5 166 aa1.34□□□□□ -2.19
CPNE3-211ENST00000621526 NAGKQ9UJ70 344 aa1.34□□□□□ -2.19
CPNE3-211ENST00000621526 GPR98Q8WXG9 6306 aa1.33□□□□□ -2.2
CPNE3-211ENST00000621526 TRBV25-1A0A075B6N4 114 aa1.33□□□□□ -2.2
CPNE3-211ENST00000621526 A0A087X002 238 aa1.33□□□□□ -2.2
CPNE3-211ENST00000621526 IGHV1-58A0A0C4DH39 117 aa1.33□□□□□ -2.2
CPNE3-211ENST00000621526 TRBV6-1A0A0K0K1D8 114 aa1.33□□□□□ -2.2
CPNE3-211ENST00000621526 SMIM30A4D0T7 59 aa1.33□□□□□ -2.2
CPNE3-211ENST00000621526 GAGE12HA6NDE8 117 aa1.33□□□□□ -2.2
CPNE3-211ENST00000621526 H3BMQ9 156 aa1.33□□□□□ -2.2
CPNE3-211ENST00000621526 RAB3DO95716 219 aa1.33□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms