RNA–Protein interactions for RNA: ENST00000621396.4

CBWD3-216, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-216ENST00000621396 HIST1H2BHQ93079 126 aa11.58□□□□□ -0.56
CBWD3-216ENST00000621396 HIST1H2BNQ99877 126 aa11.58□□□□□ -0.56
CBWD3-216ENST00000621396 HIST1H2BMQ99879 126 aa11.58□□□□□ -0.56
CBWD3-216ENST00000621396 IGHV3-16A0A0C4DH30 117 aa11.57□□□□□ -0.56
CBWD3-216ENST00000621396 ATP5L2Q7Z4Y8 100 aa11.57□□□□□ -0.56
CBWD3-216ENST00000621396 KCNS1Q96KK3 526 aa11.57□□□□□ -0.56
CBWD3-216ENST00000621396 RIGQ13278 110 aa11.57□□□□□ -0.56
CBWD3-216ENST00000621396 AMN1Q8IY45 258 aa11.57□□□□□ -0.56
CBWD3-216ENST00000621396 CLUHP3Q96NS8 147 aa11.57□□□□□ -0.56
CBWD3-216ENST00000621396 JPT2Q9H910 190 aa11.57□□□□□ -0.56
CBWD3-216ENST00000621396 GSN-AS1Q9NRJ2 163 aa11.56□□□□□ -0.56
CBWD3-216ENST00000621396 F2Z2F3 143 aa11.56□□□□□ -0.56
CBWD3-216ENST00000621396 APCSP02743 223 aa11.56□□□□□ -0.56
CBWD3-216ENST00000621396 OR5AL1P0C617 328 aa11.56□□□□□ -0.56
CBWD3-216ENST00000621396 IGHV4-30-4P0DP06 118 aa11.56□□□□□ -0.56
CBWD3-216ENST00000621396 RAB5BP61020 215 aa11.56□□□□□ -0.56
CBWD3-216ENST00000621396 CSTL1Q9H114 145 aa11.56□□□□□ -0.56
CBWD3-216ENST00000621396 SNAI2O43623 268 aa11.55□□□□□ -0.56
CBWD3-216ENST00000621396 CSNK1G2-AS1Q8NCQ2 148 aa11.55□□□□□ -0.56
CBWD3-216ENST00000621396 DNAH3Q8TD57 4116 aa11.55□□□□□ -0.56
CBWD3-216ENST00000621396 WDR73Q6P4I2 378 aa11.55□□□□□ -0.56
CBWD3-216ENST00000621396 CNFNQ9BYD5 112 aa11.55□□□□□ -0.56
CBWD3-216ENST00000621396 GAS8-AS1O95177 125 aa11.54□□□□□ -0.56
CBWD3-216ENST00000621396 HLA-DQA1P01909 254 aa11.54□□□□□ -0.56
CBWD3-216ENST00000621396 SCRT2Q9NQ03 307 aa11.54□□□□□ -0.56
CBWD3-216ENST00000621396 C14orf178Q8N769 122 aaPredicted RBP11.53□□□□□ -0.56
CBWD3-216ENST00000621396 LOC102724200A0A096LPH7 203 aaPredicted RBP11.52□□□□□ -0.56
CBWD3-216ENST00000621396 SMKR1H3BMG3 65 aa11.52□□□□□ -0.56
CBWD3-216ENST00000621396 SRIP30626 198 aa11.52□□□□□ -0.56
CBWD3-216ENST00000621396 NDUFA6P56556 154 aa11.52□□□□□ -0.56
CBWD3-216ENST00000621396 EGFEM1PQ0D2K5 195 aa11.52□□□□□ -0.56
CBWD3-216ENST00000621396 DEFB135Q30KP9 77 aa11.52□□□□□ -0.56
CBWD3-216ENST00000621396 RASL11AQ6T310 242 aa11.52□□□□□ -0.56
CBWD3-216ENST00000621396 A0A087WWL8 130 aa11.51□□□□□ -0.57
CBWD3-216ENST00000621396 TRAV26-2A0A0B4J265 109 aa11.51□□□□□ -0.57
CBWD3-216ENST00000621396 MT-ND6P03923 174 aa11.51□□□□□ -0.57
CBWD3-216ENST00000621396 ZNF876PQ49A33 203 aa11.51□□□□□ -0.57
CBWD3-216ENST00000621396 C9orf85Q96MD7 179 aa11.51□□□□□ -0.57
CBWD3-216ENST00000621396 NCR2O95944 276 aa11.51□□□□□ -0.57
CBWD3-216ENST00000621396 SNRPEP62304 92 aaKnown RBP11.51□□□□□ -0.57
CBWD3-216ENST00000621396 C11orf72Q8NBR9 251 aa11.51□□□□□ -0.57
CBWD3-216ENST00000621396 TRGV11A0A075B6L2 103 aa11.5□□□□□ -0.57
CBWD3-216ENST00000621396 AMBPP02760 352 aa11.5□□□□□ -0.57
CBWD3-216ENST00000621396 EMP1P54849 157 aa11.5□□□□□ -0.57
CBWD3-216ENST00000621396 PDZD11Q5EBL8 140 aa11.5□□□□□ -0.57
CBWD3-216ENST00000621396 SAMD5Q5TGI4 173 aa11.5□□□□□ -0.57
CBWD3-216ENST00000621396 SAMD10Q9BYL1 202 aa11.5□□□□□ -0.57
CBWD3-216ENST00000621396 IQCJQ1A5X6 159 aa11.5□□□□□ -0.57
CBWD3-216ENST00000621396 DNLZQ5SXM8 178 aa11.5□□□□□ -0.57
CBWD3-216ENST00000621396 FAM74A4Q5TZK3 123 aa11.5□□□□□ -0.57
CBWD3-216ENST00000621396 MORN3Q6PF18 240 aaPredicted RBP11.5□□□□□ -0.57
CBWD3-216ENST00000621396 ZNF493Q6ZR52 646 aa11.5□□□□□ -0.57
CBWD3-216ENST00000621396 RCHY1Q96PM5 261 aa11.5□□□□□ -0.57
CBWD3-216ENST00000621396 C1QTNF4Q9BXJ3 329 aa11.5□□□□□ -0.57
CBWD3-216ENST00000621396 S100A6P06703 90 aa11.49□□□□□ -0.57
CBWD3-216ENST00000621396 GATA1P15976 413 aaPredicted RBP11.49□□□□□ -0.57
CBWD3-216ENST00000621396 FAM104BQ5XKR9 115 aa11.49□□□□□ -0.57
CBWD3-216ENST00000621396 RNF185Q96GF1 192 aa11.49□□□□□ -0.57
CBWD3-216ENST00000621396 GOLT1BQ9Y3E0 138 aa11.49□□□□□ -0.57
CBWD3-216ENST00000621396 D6R8Y8 96 aa11.49□□□□□ -0.57
CBWD3-216ENST00000621396 MRPL51Q4U2R6 128 aaKnown RBP11.49□□□□□ -0.57
CBWD3-216ENST00000621396 C20orf144Q9BQM9 153 aa11.49□□□□□ -0.57
CBWD3-216ENST00000621396 TMEM191AQ9H0A3 160 aa11.49□□□□□ -0.57
CBWD3-216ENST00000621396 MRPL16Q9NX20 251 aaKnown RBP11.49□□□□□ -0.57
CBWD3-216ENST00000621396 IGHV4-4A0A075B6R2 117 aa11.48□□□□□ -0.57
CBWD3-216ENST00000621396 IGHV3-73A0A0B4J1V6 119 aa11.48□□□□□ -0.57
CBWD3-216ENST00000621396 RAB4AP20338 218 aa11.48□□□□□ -0.57
CBWD3-216ENST00000621396 COX19Q49B96 90 aa11.48□□□□□ -0.57
CBWD3-216ENST00000621396 ZNF705AQ6ZN79 300 aaPredicted RBP11.48□□□□□ -0.57
CBWD3-216ENST00000621396 RNASE8Q8TDE3 154 aaKnown RBP11.48□□□□□ -0.57
CBWD3-216ENST00000621396 A0A1B0GW15 77 aa11.48□□□□□ -0.57
CBWD3-216ENST00000621396 DEFB4AO15263 64 aa11.48□□□□□ -0.57
CBWD3-216ENST00000621396 CACNG7P62955 275 aa11.48□□□□□ -0.57
CBWD3-216ENST00000621396 TMEM256Q8N2U0 113 aa11.48□□□□□ -0.57
CBWD3-216ENST00000621396 ALKBH7Q9BT30 221 aaPredicted RBP11.48□□□□□ -0.57
CBWD3-216ENST00000621396 S100A8P05109 93 aa11.47□□□□□ -0.57
CBWD3-216ENST00000621396 MGPP08493 103 aa11.47□□□□□ -0.57
CBWD3-216ENST00000621396 NUPR1O60356 82 aa11.47□□□□□ -0.57
CBWD3-216ENST00000621396 MED14OSP0DP75 135 aa11.47□□□□□ -0.57
CBWD3-216ENST00000621396 NOP10Q9NPE3 64 aaKnown RBP11.47□□□□□ -0.57
CBWD3-216ENST00000621396 ZNF415Q09FC8 603 aa11.46□□□□□ -0.57
CBWD3-216ENST00000621396 RRN3P1Q2M238 152 aa11.46□□□□□ -0.58
CBWD3-216ENST00000621396 GATD1Q8NB37 220 aa11.46□□□□□ -0.58
CBWD3-216ENST00000621396 TENM3Q9P273 2699 aa11.45□□□□□ -0.58
CBWD3-216ENST00000621396 PLAC8L1A1L4L8 177 aa11.45□□□□□ -0.58
CBWD3-216ENST00000621396 CKS2P33552 79 aa11.45□□□□□ -0.58
CBWD3-216ENST00000621396 SMIM15Q7Z3B0 74 aa11.45□□□□□ -0.58
CBWD3-216ENST00000621396 TMEM263Q8WUH6 116 aaKnown RBP11.45□□□□□ -0.58
CBWD3-216ENST00000621396 TRGV1A0A0A0MS02 117 aa11.45□□□□□ -0.58
CBWD3-216ENST00000621396 NXPH4O95158 308 aa11.45□□□□□ -0.58
CBWD3-216ENST00000621396 APOC4P55056 127 aa11.45□□□□□ -0.58
CBWD3-216ENST00000621396 Q6ZTI0 123 aa11.45□□□□□ -0.58
CBWD3-216ENST00000621396 C18orf32Q8TCD1 76 aa11.45□□□□□ -0.58
CBWD3-216ENST00000621396 AP1S3Q96PC3 154 aa11.45□□□□□ -0.58
CBWD3-216ENST00000621396 LOC389332A0A1B0GUA5 103 aa11.44□□□□□ -0.58
CBWD3-216ENST00000621396 DEFB104AQ8WTQ1 72 aa11.44□□□□□ -0.58
CBWD3-216ENST00000621396 RETNQ9HD89 108 aa11.44□□□□□ -0.58
CBWD3-216ENST00000621396 X6R8D5 127 aa11.44□□□□□ -0.58
CBWD3-216ENST00000621396 C5orf52A6NGY3 159 aa11.44□□□□□ -0.58
CBWD3-216ENST00000621396 M0R2P5 195 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms