RNA–Protein interactions for RNA: ENST00000621016.4

CDH1-214, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-214ENST00000621016 C1orf43Q9BWL3 253 aa8.29□□□□□ -1.08
CDH1-214ENST00000621016 HLA-DRB4X5D2U9 266 aa8.29□□□□□ -1.08
CDH1-214ENST00000621016 ITPR1Q14643 2758 aa8.29□□□□□ -1.08
CDH1-214ENST00000621016 PTPN13Q12923 2485 aa8.29□□□□□ -1.08
CDH1-214ENST00000621016 A8MWV9 139 aa8.29□□□□□ -1.08
CDH1-214ENST00000621016 K7ENP7 123 aa8.29□□□□□ -1.08
CDH1-214ENST00000621016 FANCD2OSQ96PS1 177 aa8.29□□□□□ -1.08
CDH1-214ENST00000621016 ZANQ9Y493 2812 aa8.29□□□□□ -1.08
CDH1-214ENST00000621016 LRRK2Q5S007 2527 aa8.29□□□□□ -1.08
CDH1-214ENST00000621016 PKD1L2Q7Z442 2459 aa8.29□□□□□ -1.08
CDH1-214ENST00000621016 A0A096LNJ9 63 aa8.29□□□□□ -1.08
CDH1-214ENST00000621016 HOXA3O43365 443 aaPredicted RBP8.29□□□□□ -1.08
CDH1-214ENST00000621016 SH2D1AO60880 128 aa8.29□□□□□ -1.08
CDH1-214ENST00000621016 IGLC6P0CF74 106 aa8.29□□□□□ -1.08
CDH1-214ENST00000621016 SRD5A1P18405 259 aa8.29□□□□□ -1.08
CDH1-214ENST00000621016 CKS2P33552 79 aa8.29□□□□□ -1.08
CDH1-214ENST00000621016 C8orf31Q8N9H6 132 aa8.29□□□□□ -1.08
CDH1-214ENST00000621016 GAS8-AS1O95177 125 aa8.28□□□□□ -1.08
CDH1-214ENST00000621016 CLEC19AQ6UXS0 136 aa8.28□□□□□ -1.08
CDH1-214ENST00000621016 ABCA12Q86UK0 2595 aa8.28□□□□□ -1.08
CDH1-214ENST00000621016 FAM236AA0A1B0GUQ0 79 aa8.28□□□□□ -1.08
CDH1-214ENST00000621016 FAM236BA0A1B0GV22 79 aa8.28□□□□□ -1.08
CDH1-214ENST00000621016 H3BRN7 92 aa8.28□□□□□ -1.08
CDH1-214ENST00000621016 HERVK_113P63121 156 aa8.28□□□□□ -1.08
CDH1-214ENST00000621016 C15orf32Q32M92 178 aa8.28□□□□□ -1.08
CDH1-214ENST00000621016 FOXC2Q99958 501 aa8.28□□□□□ -1.08
CDH1-214ENST00000621016 PRAC2D3DTV9 90 aa8.28□□□□□ -1.08
CDH1-214ENST00000621016 EGR2P11161 476 aaPredicted RBP8.28□□□□□ -1.08
CDH1-214ENST00000621016 ZNF80P51504 273 aaPredicted RBP8.28□□□□□ -1.08
CDH1-214ENST00000621016 RPL11P62913 178 aaKnown RBP8.28□□□□□ -1.08
CDH1-214ENST00000621016 TMEM101Q96IK0 257 aa8.28□□□□□ -1.08
CDH1-214ENST00000621016 DNAJC30Q96LL9 226 aa8.28□□□□□ -1.08
CDH1-214ENST00000621016 LINC00477Q96M19 166 aa8.28□□□□□ -1.08
CDH1-214ENST00000621016 CFAP46Q8IYW2 2715 aa8.27□□□□□ -1.09
CDH1-214ENST00000621016 TRAV40A0A0B4J280 105 aa8.27□□□□□ -1.09
CDH1-214ENST00000621016 NDUFA3O95167 84 aa8.27□□□□□ -1.09
CDH1-214ENST00000621016 GATA1P15976 413 aaPredicted RBP8.27□□□□□ -1.09
CDH1-214ENST00000621016 CRIP2P52943 208 aaPredicted RBP8.27□□□□□ -1.09
CDH1-214ENST00000621016 DEFB1P60022 68 aa8.27□□□□□ -1.09
CDH1-214ENST00000621016 MORN3Q6PF18 240 aaPredicted RBP8.27□□□□□ -1.09
CDH1-214ENST00000621016 NTN5Q8WTR8 489 aaPredicted RBP8.27□□□□□ -1.09
CDH1-214ENST00000621016 LINC01587Q99440 93 aa8.27□□□□□ -1.09
CDH1-214ENST00000621016 BEX4Q9NWD9 120 aaPredicted RBP8.27□□□□□ -1.09
CDH1-214ENST00000621016 ZNF492Q9P255 531 aa8.27□□□□□ -1.09
CDH1-214ENST00000621016 A0A1W2PPR1 153 aa8.26□□□□□ -1.09
CDH1-214ENST00000621016 LY6LH3BQJ8 138 aa8.26□□□□□ -1.09
CDH1-214ENST00000621016 CD7P09564 240 aa8.26□□□□□ -1.09
CDH1-214ENST00000621016 ZNF56Q15929 161 aa8.26□□□□□ -1.09
CDH1-214ENST00000621016 DUX5Q96PT3 197 aa8.26□□□□□ -1.09
CDH1-214ENST00000621016 SONP18583 2426 aaKnown RBP8.26□□□□□ -1.09
CDH1-214ENST00000621016 TCL1BO95988 128 aa8.26□□□□□ -1.09
CDH1-214ENST00000621016 CFHR4Q92496 578 aa8.26□□□□□ -1.09
CDH1-214ENST00000621016 HAX1O00165 279 aa8.26□□□□□ -1.09
CDH1-214ENST00000621016 ADORA2A-AS1P86434 159 aa8.26□□□□□ -1.09
CDH1-214ENST00000621016 LGALS9BQ3B8N2 356 aa8.26□□□□□ -1.09
CDH1-214ENST00000621016 LGALS9CQ6DKI2 356 aa8.26□□□□□ -1.09
CDH1-214ENST00000621016 PVRIGQ6DKI7 326 aa8.26□□□□□ -1.09
CDH1-214ENST00000621016 CEMP1Q6PRD7 247 aaPredicted RBP8.26□□□□□ -1.09
CDH1-214ENST00000621016 TRPT1Q86TN4 253 aaKnown RBP8.26□□□□□ -1.09
CDH1-214ENST00000621016 GATD1Q8NB37 220 aa8.26□□□□□ -1.09
CDH1-214ENST00000621016 CTSGP08311 255 aa8.25□□□□□ -1.09
CDH1-214ENST00000621016 BRD3OSQ6XYD6 125 aa8.25□□□□□ -1.09
CDH1-214ENST00000621016 TMEM14CQ9P0S9 112 aa8.25□□□□□ -1.09
CDH1-214ENST00000621016 TEX49A0A1B0GTD5 131 aa8.24□□□□□ -1.09
CDH1-214ENST00000621016 NPYP01303 97 aa8.24□□□□□ -1.09
CDH1-214ENST00000621016 CT83Q5H943 113 aa8.24□□□□□ -1.09
CDH1-214ENST00000621016 TMEM78Q5T7P6 136 aa8.24□□□□□ -1.09
CDH1-214ENST00000621016 PRR25Q96S07 402 aa8.24□□□□□ -1.09
CDH1-214ENST00000621016 PRADC1Q9BSG0 188 aa8.24□□□□□ -1.09
CDH1-214ENST00000621016 HIGD1BQ9P298 99 aa8.24□□□□□ -1.09
CDH1-214ENST00000621016 CCDC168Q8NDH2 2452 aa8.24□□□□□ -1.09
CDH1-214ENST00000621016 IGLV11-55A0A075B6I3 123 aa8.24□□□□□ -1.09
CDH1-214ENST00000621016 ATP6V0E1O15342 81 aa8.24□□□□□ -1.09
CDH1-214ENST00000621016 LY6EQ16553 131 aa8.24□□□□□ -1.09
CDH1-214ENST00000621016 KIR2DL5BQ8NHK3 375 aa8.24□□□□□ -1.09
CDH1-214ENST00000621016 GFRA4Q9GZZ7 299 aa8.24□□□□□ -1.09
CDH1-214ENST00000621016 TRAV26-2A0A0B4J265 109 aa8.24□□□□□ -1.09
CDH1-214ENST00000621016 F8W735 103 aaPredicted RBP8.24□□□□□ -1.09
CDH1-214ENST00000621016 RS1O15537 224 aa8.24□□□□□ -1.09
CDH1-214ENST00000621016 MRPL51Q4U2R6 128 aaKnown RBP8.24□□□□□ -1.09
CDH1-214ENST00000621016 IL17RELQ6ZVW7 336 aa8.24□□□□□ -1.09
CDH1-214ENST00000621016 ORMDL3Q8N138 153 aa8.24□□□□□ -1.09
CDH1-214ENST00000621016 KLK15Q9H2R5 256 aa8.24□□□□□ -1.09
CDH1-214ENST00000621016 IGHV7-81A0A0B4J1V7 117 aa8.23□□□□□ -1.09
CDH1-214ENST00000621016 SAA4P35542 130 aa8.23□□□□□ -1.09
CDH1-214ENST00000621016 OR13C6PQ8NH95 151 aa8.23□□□□□ -1.09
CDH1-214ENST00000621016 BPESC1Q9GZL8 116 aa8.23□□□□□ -1.09
CDH1-214ENST00000621016 TMEM126AQ9H061 195 aa8.23□□□□□ -1.09
CDH1-214ENST00000621016 C2CD3Q4AC94 2353 aa8.23□□□□□ -1.09
CDH1-214ENST00000621016 WNK1Q9H4A3 2382 aa8.23□□□□□ -1.09
CDH1-214ENST00000621016 TRAV2A0A0B4J234 112 aa8.23□□□□□ -1.09
CDH1-214ENST00000621016 RBAKDNA6NC62 111 aa8.23□□□□□ -1.09
CDH1-214ENST00000621016 IGHV3-11P01762 117 aa8.23□□□□□ -1.09
CDH1-214ENST00000621016 ZNF493Q6ZR52 646 aa8.23□□□□□ -1.09
CDH1-214ENST00000621016 SMAD5-AS1Q9Y6J3 95 aa8.23□□□□□ -1.09
CDH1-214ENST00000621016 TRGV11A0A075B6L2 103 aa8.23□□□□□ -1.09
CDH1-214ENST00000621016 HBDP02042 147 aa8.23□□□□□ -1.09
CDH1-214ENST00000621016 SCGB1D4Q6XE38 83 aa8.23□□□□□ -1.09
CDH1-214ENST00000621016 OR11H6Q8NGC7 330 aa8.23□□□□□ -1.09
CDH1-214ENST00000621016 OR10J6PQ8NGY7 276 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms