RNA–Protein interactions for RNA: ENST00000619644.4

SMTN-223, Transcript of smoothelin, human

TSL 2 BASIC

Gene SMTN, Length 3,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMTN-223	ENST00000619644	CYSLTR1	Q9Y271	337 aa		11.04	□□□□□ -0.64
SMTN-223	ENST00000619644	PHLDA3	Q9Y5J5	127 aa		11.04	□□□□□ -0.64
SMTN-223	ENST00000619644	SPINK8	P0C7L1	97 aa		11.03	□□□□□ -0.64
SMTN-223	ENST00000619644	PLN	P26678	52 aa		11.03	□□□□□ -0.64
SMTN-223	ENST00000619644	RNASE4	P34096	147 aa	Known RBP	11.03	□□□□□ -0.64
SMTN-223	ENST00000619644	SMCP	P49901	116 aa	Predicted RBP	11.03	□□□□□ -0.64
SMTN-223	ENST00000619644	UNQ9165/PRO28630	Q6UXU0	137 aa		11.03	□□□□□ -0.64
SMTN-223	ENST00000619644	TRAV41	A0A0B4J266	112 aa		11.03	□□□□□ -0.64
SMTN-223	ENST00000619644	IGHV7-4-1	A0A0J9YVY3	117 aa		11.03	□□□□□ -0.64
SMTN-223	ENST00000619644	SRSF2	Q01130	221 aa	Known RBP	11.03	□□□□□ -0.64
SMTN-223	ENST00000619644	CFAP126	Q5VTH2	177 aa		11.03	□□□□□ -0.64
SMTN-223	ENST00000619644	ZNF418	Q8TF45	676 aa	Predicted RBP	11.03	□□□□□ -0.64
SMTN-223	ENST00000619644	OR11H12	B2RN74	326 aa		11.03	□□□□□ -0.64
SMTN-223	ENST00000619644	HOXA3	O43365	443 aa	Predicted RBP	11.03	□□□□□ -0.64
SMTN-223	ENST00000619644	MT-ATP8	P03928	68 aa		11.03	□□□□□ -0.64
SMTN-223	ENST00000619644	NFE4	Q86UQ8	179 aa		11.03	□□□□□ -0.64
SMTN-223	ENST00000619644	OR11H1	Q8NG94	326 aa		11.03	□□□□□ -0.64
SMTN-223	ENST00000619644	OR11H2	Q8NH07	326 aa		11.03	□□□□□ -0.64
SMTN-223	ENST00000619644	C20orf173	Q96LM9	149 aa		11.03	□□□□□ -0.64
SMTN-223	ENST00000619644	TRBV7-1	A0A0A6YYK4	115 aa		11.02	□□□□□ -0.64
SMTN-223	ENST00000619644	MYMX	A0A1B0GTQ4	84 aa		11.02	□□□□□ -0.64
SMTN-223	ENST00000619644	FHL3	Q13643	280 aa		11.02	□□□□□ -0.64
SMTN-223	ENST00000619644	OR10J6P	Q8NGY7	276 aa		11.02	□□□□□ -0.64
SMTN-223	ENST00000619644	RPL39L	Q96EH5	51 aa	Known RBP	11.02	□□□□□ -0.64
SMTN-223	ENST00000619644	SCGB3A1	Q96QR1	104 aa		11.02	□□□□□ -0.64
SMTN-223	ENST00000619644	PF4V1	P10720	104 aa		11.02	□□□□□ -0.65
SMTN-223	ENST00000619644	CFAP161	Q6P656	301 aa		11.02	□□□□□ -0.65
SMTN-223	ENST00000619644	RBAKDN	A6NC62	111 aa		11.01	□□□□□ -0.65
SMTN-223	ENST00000619644	SFTA2	Q6UW10	78 aa		11.01	□□□□□ -0.65
SMTN-223	ENST00000619644	NRAC	Q8N912	160 aa		11.01	□□□□□ -0.65
SMTN-223	ENST00000619644	ATP6V0E2	Q8NHE4	81 aa		11.01	□□□□□ -0.65
SMTN-223	ENST00000619644	DLX4	Q92988	240 aa	Predicted RBP	11.01	□□□□□ -0.65
SMTN-223	ENST00000619644	C5orf56	Q8N8D9	126 aa		11.01	□□□□□ -0.65
SMTN-223	ENST00000619644		F8VRH5	84 aa		11	□□□□□ -0.65
SMTN-223	ENST00000619644	LINC01619	G3V211	115 aa		11	□□□□□ -0.65
SMTN-223	ENST00000619644	EMP1	P54849	157 aa		11	□□□□□ -0.65
SMTN-223	ENST00000619644	GNRH2	O43555	120 aa		11	□□□□□ -0.65
SMTN-223	ENST00000619644	XG	P55808	180 aa		11	□□□□□ -0.65
SMTN-223	ENST00000619644	LINC01549	A6NIU2	74 aa		10.99	□□□□□ -0.65
SMTN-223	ENST00000619644		H7C1H1	209 aa		10.99	□□□□□ -0.65
SMTN-223	ENST00000619644	LGALS1	P09382	135 aa	Known RBP	10.99	□□□□□ -0.65
SMTN-223	ENST00000619644		Q6ZUT4	128 aa		10.99	□□□□□ -0.65
SMTN-223	ENST00000619644	AJUBA	Q96IF1	538 aa		10.99	□□□□□ -0.65
SMTN-223	ENST00000619644	PSMB2	P49721	201 aa		10.99	□□□□□ -0.65
SMTN-223	ENST00000619644	ANXA2R	Q3ZCQ2	193 aa		10.99	□□□□□ -0.65
SMTN-223	ENST00000619644	PTH2	Q96A98	100 aa		10.99	□□□□□ -0.65
SMTN-223	ENST00000619644	LOC107984156	A0A0G2JMH3	177 aa		10.99	□□□□□ -0.65
SMTN-223	ENST00000619644	ASIP	P42127	132 aa		10.99	□□□□□ -0.65
SMTN-223	ENST00000619644	LMO4	P61968	165 aa		10.99	□□□□□ -0.65
SMTN-223	ENST00000619644	ARL17A	Q8IVW1	177 aa		10.99	□□□□□ -0.65
SMTN-223	ENST00000619644	SMIM2	Q9BVW6	85 aa		10.99	□□□□□ -0.65
SMTN-223	ENST00000619644		F5H697	171 aa		10.98	□□□□□ -0.65
SMTN-223	ENST00000619644	IGKV3-20	P01619	116 aa		10.98	□□□□□ -0.65
SMTN-223	ENST00000619644	C9orf47	Q6ZRZ4	202 aa		10.98	□□□□□ -0.65
SMTN-223	ENST00000619644	MOB4	Q9Y3A3	225 aa		10.98	□□□□□ -0.65
SMTN-223	ENST00000619644	CRYBG3	Q68DQ2	2970 aa		10.98	□□□□□ -0.65
SMTN-223	ENST00000619644	SUMO2	P61956	95 aa	Known RBP	10.97	□□□□□ -0.65
SMTN-223	ENST00000619644	ZFP2	Q6ZN57	461 aa		10.97	□□□□□ -0.65
SMTN-223	ENST00000619644	TRAV12-1	A0A0B4J245	112 aa		10.97	□□□□□ -0.65
SMTN-223	ENST00000619644	SCGB1D4	Q6XE38	83 aa		10.97	□□□□□ -0.65
SMTN-223	ENST00000619644	C9orf139	Q6ZV77	190 aa		10.97	□□□□□ -0.65
SMTN-223	ENST00000619644	TRAV21	A0A0B4J279	112 aa		10.97	□□□□□ -0.65
SMTN-223	ENST00000619644	TSPAN13	O95857	204 aa		10.97	□□□□□ -0.65
SMTN-223	ENST00000619644		A6NJY4	79 aa		10.96	□□□□□ -0.66
SMTN-223	ENST00000619644	GATA3	P23771	443 aa		10.96	□□□□□ -0.66
SMTN-223	ENST00000619644	RNF183	Q96D59	192 aa		10.96	□□□□□ -0.66
SMTN-223	ENST00000619644	CENPE	Q02224	2701 aa		10.96	□□□□□ -0.66
SMTN-223	ENST00000619644	FAM74A4	Q5TZK3	123 aa		10.96	□□□□□ -0.66
SMTN-223	ENST00000619644	CARD19	Q96LW7	228 aa		10.96	□□□□□ -0.66
SMTN-223	ENST00000619644	PRADC1	Q9BSG0	188 aa		10.96	□□□□□ -0.66
SMTN-223	ENST00000619644	USP9Y	O00507	2555 aa	Predicted RBP	10.95	□□□□□ -0.66
SMTN-223	ENST00000619644	ZNF815P	A8K554	130 aa		10.95	□□□□□ -0.66
SMTN-223	ENST00000619644		H3BUX3	64 aa		10.95	□□□□□ -0.66
SMTN-223	ENST00000619644	BLCAP	P62952	87 aa		10.95	□□□□□ -0.66
SMTN-223	ENST00000619644	C2orf66	Q6UXQ4	117 aa		10.95	□□□□□ -0.66
SMTN-223	ENST00000619644	PLEKHB2	Q96CS7	222 aa		10.95	□□□□□ -0.66
SMTN-223	ENST00000619644	RASL10A	Q92737	203 aa		10.95	□□□□□ -0.66
SMTN-223	ENST00000619644	DPH3P1	Q9H4G8	78 aa		10.95	□□□□□ -0.66
SMTN-223	ENST00000619644		A0A087WWL8	130 aa		10.94	□□□□□ -0.66
SMTN-223	ENST00000619644	C19orf84	I3L1E1	186 aa		10.94	□□□□□ -0.66
SMTN-223	ENST00000619644	UBE2D1	P51668	147 aa		10.94	□□□□□ -0.66
SMTN-223	ENST00000619644	SRSF9	Q13242	221 aa	Known RBP eCLIP	10.94	□□□□□ -0.66
SMTN-223	ENST00000619644	PPDPFL	Q8WWR9	84 aa		10.94	□□□□□ -0.66
SMTN-223	ENST00000619644	JPT2	Q9H910	190 aa		10.94	□□□□□ -0.66
SMTN-223	ENST00000619644	CELSR2	Q9HCU4	2923 aa		10.94	□□□□□ -0.66
SMTN-223	ENST00000619644	IGHV4-38-2	P0DP08	117 aa		10.94	□□□□□ -0.66
SMTN-223	ENST00000619644	UCN	P55089	124 aa		10.94	□□□□□ -0.66
SMTN-223	ENST00000619644	ORMDL2	Q53FV1	153 aa		10.94	□□□□□ -0.66
SMTN-223	ENST00000619644	ZFAND2A	Q8N6M9	145 aa		10.94	□□□□□ -0.66
SMTN-223	ENST00000619644	LINC00477	Q96M19	166 aa		10.94	□□□□□ -0.66
SMTN-223	ENST00000619644	ERG28	Q9UKR5	140 aa		10.94	□□□□□ -0.66
SMTN-223	ENST00000619644	EDN2	P20800	178 aa		10.94	□□□□□ -0.66
SMTN-223	ENST00000619644	TEN1	Q86WV5	123 aa		10.94	□□□□□ -0.66
SMTN-223	ENST00000619644	NEXN-AS1	Q8NBZ9	246 aa		10.94	□□□□□ -0.66
SMTN-223	ENST00000619644	RHPN1-AS1	Q9BWJ2	59 aa		10.94	□□□□□ -0.66
SMTN-223	ENST00000619644	ABCA2	Q9BZC7	2435 aa		10.93	□□□□□ -0.66
SMTN-223	ENST00000619644	UBE2D3	P61077	147 aa		10.93	□□□□□ -0.66
SMTN-223	ENST00000619644	UBE2D2	P62837	147 aa		10.93	□□□□□ -0.66
SMTN-223	ENST00000619644		Q6ZS46	218 aa		10.93	□□□□□ -0.66
SMTN-223	ENST00000619644	MRPL53	Q96EL3	112 aa	Known RBP	10.93	□□□□□ -0.66

Retrieved 100 of 20,778 RNA–protein pairs in 1162.8 ms