RNA–Protein interactions for RNA: ENST00000618944.4

TP53-223, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,404 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-223ENST00000618944 HSD52Q0P140 79 aa8.42□□□□□ -1.06
TP53-223ENST00000618944 SMIM2Q9BVW6 85 aa8.42□□□□□ -1.06
TP53-223ENST00000618944 DPH3P1Q9H4G8 78 aa8.42□□□□□ -1.06
TP53-223ENST00000618944 ACACBO00763 2458 aa8.42□□□□□ -1.06
TP53-223ENST00000618944 SUMO2P61956 95 aaKnown RBP8.42□□□□□ -1.06
TP53-223ENST00000618944 NEGR1Q7Z3B1 354 aa8.42□□□□□ -1.06
TP53-223ENST00000618944 JPT2Q9H910 190 aa8.42□□□□□ -1.06
TP53-223ENST00000618944 TRAV12-3A0A0B4J271 114 aa8.41□□□□□ -1.06
TP53-223ENST00000618944 SIVA1O15304 175 aa8.41□□□□□ -1.06
TP53-223ENST00000618944 ZNF688P0C7X2 276 aa8.41□□□□□ -1.06
TP53-223ENST00000618944 PSMB8P28062 276 aa8.41□□□□□ -1.06
TP53-223ENST00000618944 DUX5Q96PT3 197 aa8.41□□□□□ -1.06
TP53-223ENST00000618944 A6NDN8 102 aa8.41□□□□□ -1.06
TP53-223ENST00000618944 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.41□□□□□ -1.06
TP53-223ENST00000618944 H3BUT2 72 aa8.41□□□□□ -1.06
TP53-223ENST00000618944 DCANP1Q8TF63 244 aa8.41□□□□□ -1.06
TP53-223ENST00000618944 SCGB3A1Q96QR1 104 aa8.41□□□□□ -1.06
TP53-223ENST00000618944 ZFYVE26Q68DK2 2539 aa8.41□□□□□ -1.06
TP53-223ENST00000618944 FBN2P35556 2912 aa8.4□□□□□ -1.06
TP53-223ENST00000618944 DOPEY2Q9Y3R5 2298 aa8.4□□□□□ -1.06
TP53-223ENST00000618944 GCSHP23434 173 aa8.4□□□□□ -1.06
TP53-223ENST00000618944 PSMG4Q5JS54 123 aa8.4□□□□□ -1.06
TP53-223ENST00000618944 MAPKAPK5-AS1Q8N8E1 139 aa8.4□□□□□ -1.06
TP53-223ENST00000618944 LINC01356Q8N9X3 169 aa8.4□□□□□ -1.06
TP53-223ENST00000618944 AP1S3Q96PC3 154 aa8.4□□□□□ -1.06
TP53-223ENST00000618944 FAM208BQ5VWN6 2430 aa8.4□□□□□ -1.07
TP53-223ENST00000618944 TRAV12-2A0A075B6T6 113 aa8.4□□□□□ -1.07
TP53-223ENST00000618944 A0A087WX48 190 aa8.4□□□□□ -1.07
TP53-223ENST00000618944 K7EMI3 77 aa8.4□□□□□ -1.07
TP53-223ENST00000618944 ID1P41134 155 aa8.4□□□□□ -1.07
TP53-223ENST00000618944 FAM159AQ6UWV7 190 aa8.4□□□□□ -1.07
TP53-223ENST00000618944 JMJD8Q96S16 334 aa8.4□□□□□ -1.07
TP53-223ENST00000618944 A0A087WWL8 130 aa8.39□□□□□ -1.07
TP53-223ENST00000618944 H3BRM9 83 aa8.39□□□□□ -1.07
TP53-223ENST00000618944 K7EMT4 169 aa8.39□□□□□ -1.07
TP53-223ENST00000618944 CD7P09564 240 aa8.39□□□□□ -1.07
TP53-223ENST00000618944 TRBV25-1A0A075B6N4 114 aa8.39□□□□□ -1.07
TP53-223ENST00000618944 GAGE10A6NGK3 116 aa8.39□□□□□ -1.07
TP53-223ENST00000618944 C9orf118A6NHY6 69 aa8.39□□□□□ -1.07
TP53-223ENST00000618944 RNF223E7ERA6 249 aa8.39□□□□□ -1.07
TP53-223ENST00000618944 SYNJ2BPP57105 145 aa8.39□□□□□ -1.07
TP53-223ENST00000618944 APRG1Q8IVJ8 170 aa8.39□□□□□ -1.07
TP53-223ENST00000618944 CSTL1Q9H114 145 aa8.39□□□□□ -1.07
TP53-223ENST00000618944 KLLNB2CW77 178 aa8.38□□□□□ -1.07
TP53-223ENST00000618944 GATA3P23771 443 aa8.38□□□□□ -1.07
TP53-223ENST00000618944 ORMDL2Q53FV1 153 aa8.38□□□□□ -1.07
TP53-223ENST00000618944 C20orf78Q9BR46 151 aa8.38□□□□□ -1.07
TP53-223ENST00000618944 CHAC1Q9BUX1 264 aa8.38□□□□□ -1.07
TP53-223ENST00000618944 F5H697 171 aa8.38□□□□□ -1.07
TP53-223ENST00000618944 FXYD2P54710 66 aa8.38□□□□□ -1.07
TP53-223ENST00000618944 DSCR9P59020 149 aa8.38□□□□□ -1.07
TP53-223ENST00000618944 C2orf66Q6UXQ4 117 aa8.38□□□□□ -1.07
TP53-223ENST00000618944 TOMM6Q96B49 74 aa8.38□□□□□ -1.07
TP53-223ENST00000618944 BEX4Q9NWD9 120 aaPredicted RBP8.38□□□□□ -1.07
TP53-223ENST00000618944 H7C1H1 209 aa8.37□□□□□ -1.07
TP53-223ENST00000618944 SLC25A16P16260 332 aa8.37□□□□□ -1.07
TP53-223ENST00000618944 CHTOPQ9Y3Y2 248 aaKnown RBP8.37□□□□□ -1.07
TP53-223ENST00000618944 ZNF462Q96JM2 2506 aa8.37□□□□□ -1.07
TP53-223ENST00000618944 K7ERJ3 54 aa8.37□□□□□ -1.07
TP53-223ENST00000618944 LINC00315P59091 139 aa8.37□□□□□ -1.07
TP53-223ENST00000618944 MDFICQ9P1T7 246 aa8.37□□□□□ -1.07
TP53-223ENST00000618944 KIF25-AS1Q9Y6Z4 181 aa8.37□□□□□ -1.07
TP53-223ENST00000618944 MED14OSP0DP75 135 aa8.36□□□□□ -1.07
TP53-223ENST00000618944 FAM74A4Q5TZK3 123 aa8.36□□□□□ -1.07
TP53-223ENST00000618944 SORL1Q92673 2214 aa8.36□□□□□ -1.07
TP53-223ENST00000618944 MUC4Q99102 2169 aa8.36□□□□□ -1.07
TP53-223ENST00000618944 MXRA5Q9NR99 2828 aa8.36□□□□□ -1.07
TP53-223ENST00000618944 IGHV4OR15-8A0A075B7B6 117 aa8.35□□□□□ -1.07
TP53-223ENST00000618944 A0A087WW49 117 aa8.35□□□□□ -1.07
TP53-223ENST00000618944 TRBV7-9A0A0J9YWB2 115 aa8.35□□□□□ -1.07
TP53-223ENST00000618944 F8VRH5 84 aa8.35□□□□□ -1.07
TP53-223ENST00000618944 PLNP26678 52 aa8.35□□□□□ -1.07
TP53-223ENST00000618944 A0A096LNT2 108 aa8.35□□□□□ -1.07
TP53-223ENST00000618944 PRSS29PA6NIE9 313 aa8.35□□□□□ -1.07
TP53-223ENST00000618944 SMIM13P0DJ93 91 aa8.35□□□□□ -1.07
TP53-223ENST00000618944 KRTAP10-9P60411 292 aa8.35□□□□□ -1.07
TP53-223ENST00000618944 SNRPD3P62318 126 aaKnown RBP8.35□□□□□ -1.07
TP53-223ENST00000618944 SPINK13Q1W4C9 94 aa8.35□□□□□ -1.07
TP53-223ENST00000618944 SUMO4Q6EEV6 95 aa8.35□□□□□ -1.07
TP53-223ENST00000618944 NEXN-AS1Q8NBZ9 246 aa8.35□□□□□ -1.07
TP53-223ENST00000618944 BAALCQ8WXS3 180 aa8.35□□□□□ -1.07
TP53-223ENST00000618944 ZNF580Q9UK33 172 aa8.35□□□□□ -1.07
TP53-223ENST00000618944 CREBBPQ92793 2442 aa8.35□□□□□ -1.07
TP53-223ENST00000618944 ANKRD17O75179 2603 aaKnown RBP8.35□□□□□ -1.07
TP53-223ENST00000618944 LRRK2Q5S007 2527 aa8.34□□□□□ -1.07
TP53-223ENST00000618944 DUSP14O95147 198 aaKnown RBP8.34□□□□□ -1.07
TP53-223ENST00000618944 COX6B1P14854 86 aa8.34□□□□□ -1.07
TP53-223ENST00000618944 HIST2H2BDQ6DRA6 164 aa8.34□□□□□ -1.07
TP53-223ENST00000618944 HIGD1BQ9P298 99 aa8.34□□□□□ -1.07
TP53-223ENST00000618944 TRAV12-1A0A0B4J245 112 aa8.34□□□□□ -1.07
TP53-223ENST00000618944 A0A0J9YX75 114 aa8.34□□□□□ -1.07
TP53-223ENST00000618944 K7ERU9 68 aa8.34□□□□□ -1.07
TP53-223ENST00000618944 HOXA3O43365 443 aaPredicted RBP8.34□□□□□ -1.07
TP53-223ENST00000618944 HLA-DRB4P13762 266 aa8.34□□□□□ -1.07
TP53-223ENST00000618944 EMP1P54849 157 aa8.34□□□□□ -1.07
TP53-223ENST00000618944 NHP2Q9NX24 153 aaKnown RBP8.34□□□□□ -1.07
TP53-223ENST00000618944 HLA-DRB4X5D2U9 266 aa8.34□□□□□ -1.07
TP53-223ENST00000618944 HTN1P15515 57 aa8.33□□□□□ -1.08
TP53-223ENST00000618944 HOXD3P31249 432 aaPredicted RBP8.33□□□□□ -1.08
TP53-223ENST00000618944 DEFB136Q30KP8 78 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms