RNA–Protein interactions for RNA: ENST00000617904.4

TRAPPC3-210, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-210ENST00000617904 TRAV12-2A0A075B6T6 113 aa12.37□□□□□ -0.43
TRAPPC3-210ENST00000617904 CBY3A6NI87 242 aa12.37□□□□□ -0.43
TRAPPC3-210ENST00000617904 UBE2CO00762 179 aa12.37□□□□□ -0.43
TRAPPC3-210ENST00000617904 PPBPP02775 128 aa12.37□□□□□ -0.43
TRAPPC3-210ENST00000617904 HOXA5P20719 270 aa12.37□□□□□ -0.43
TRAPPC3-210ENST00000617904 SRIP30626 198 aa12.37□□□□□ -0.43
TRAPPC3-210ENST00000617904 COA6Q5JTJ3 125 aaKnown RBP12.37□□□□□ -0.43
TRAPPC3-210ENST00000617904 TRPT1Q86TN4 253 aaKnown RBP12.37□□□□□ -0.43
TRAPPC3-210ENST00000617904 TIMM8BQ9Y5J9 83 aaPredicted RBP12.37□□□□□ -0.43
TRAPPC3-210ENST00000617904 NOTCH3Q9UM47 2321 aa12.37□□□□□ -0.43
TRAPPC3-210ENST00000617904 LOC102724200A0A096LPH7 203 aaPredicted RBP12.37□□□□□ -0.43
TRAPPC3-210ENST00000617904 LOC105371267A0A1B0GV96 52 aa12.37□□□□□ -0.43
TRAPPC3-210ENST00000617904 SMIM17P0DL12 118 aa12.37□□□□□ -0.43
TRAPPC3-210ENST00000617904 SLAQ13239 276 aa12.37□□□□□ -0.43
TRAPPC3-210ENST00000617904 WFDC9Q8NEX5 89 aa12.37□□□□□ -0.43
TRAPPC3-210ENST00000617904 SSTP61278 116 aa12.36□□□□□ -0.43
TRAPPC3-210ENST00000617904 KIAA1644Q3SXP7 199 aa12.36□□□□□ -0.43
TRAPPC3-210ENST00000617904 DMRTA1Q5VZB9 504 aa12.36□□□□□ -0.43
TRAPPC3-210ENST00000617904 FAM104BQ5XKR9 115 aa12.36□□□□□ -0.43
TRAPPC3-210ENST00000617904 AP1S3Q96PC3 154 aa12.36□□□□□ -0.43
TRAPPC3-210ENST00000617904 LINC01587Q99440 93 aa12.36□□□□□ -0.43
TRAPPC3-210ENST00000617904 LINC00467Q9BRT7 94 aa12.36□□□□□ -0.43
TRAPPC3-210ENST00000617904 GOLT1BQ9Y3E0 138 aa12.36□□□□□ -0.43
TRAPPC3-210ENST00000617904 FXYD7P58549 80 aa12.35□□□□□ -0.43
TRAPPC3-210ENST00000617904 ZNF415Q09FC8 603 aa12.35□□□□□ -0.43
TRAPPC3-210ENST00000617904 ORMDL3Q8N138 153 aa12.35□□□□□ -0.43
TRAPPC3-210ENST00000617904 MRAPQ8TCY5 172 aa12.35□□□□□ -0.43
TRAPPC3-210ENST00000617904 TMEM18Q96B42 140 aa12.35□□□□□ -0.43
TRAPPC3-210ENST00000617904 LAMTOR2Q9Y2Q5 125 aa12.35□□□□□ -0.43
TRAPPC3-210ENST00000617904 M0R381 172 aa12.34□□□□□ -0.43
TRAPPC3-210ENST00000617904 GNRH2O43555 120 aa12.34□□□□□ -0.43
TRAPPC3-210ENST00000617904 FRMD6-AS1P0C7T7 363 aa12.34□□□□□ -0.43
TRAPPC3-210ENST00000617904 CKS2P33552 79 aa12.34□□□□□ -0.43
TRAPPC3-210ENST00000617904 AKR1D1P51857 326 aa12.34□□□□□ -0.43
TRAPPC3-210ENST00000617904 OR10AG1Q8NH19 301 aa12.34□□□□□ -0.43
TRAPPC3-210ENST00000617904 ALKBH7Q9BT30 221 aaPredicted RBP12.34□□□□□ -0.43
TRAPPC3-210ENST00000617904 KIR3DS1Q14943 382 aa12.33□□□□□ -0.44
TRAPPC3-210ENST00000617904 DPH3P1Q9H4G8 78 aa12.33□□□□□ -0.44
TRAPPC3-210ENST00000617904 SCRT2Q9NQ03 307 aa12.33□□□□□ -0.44
TRAPPC3-210ENST00000617904 IGHV3-16A0A0C4DH30 117 aa12.32□□□□□ -0.44
TRAPPC3-210ENST00000617904 MUC21A0A0G2JKD1 596 aa12.32□□□□□ -0.44
TRAPPC3-210ENST00000617904 MUC21A0A140T8X8 626 aa12.32□□□□□ -0.44
TRAPPC3-210ENST00000617904 PPP1R17O96001 155 aa12.32□□□□□ -0.44
TRAPPC3-210ENST00000617904 ZNF124Q15973 351 aa12.32□□□□□ -0.44
TRAPPC3-210ENST00000617904 Q8N1Y9 231 aa12.32□□□□□ -0.44
TRAPPC3-210ENST00000617904 SPXQ9BT56 116 aa12.32□□□□□ -0.44
TRAPPC3-210ENST00000617904 MRAP2Q96G30 205 aa12.31□□□□□ -0.44
TRAPPC3-210ENST00000617904 PRELID3AQ96N28 172 aa12.31□□□□□ -0.44
TRAPPC3-210ENST00000617904 SAMD10Q9BYL1 202 aa12.31□□□□□ -0.44
TRAPPC3-210ENST00000617904 XCL2Q9UBD3 114 aa12.31□□□□□ -0.44
TRAPPC3-210ENST00000617904 RBMY1BA6NDE4 496 aaKnown RBP12.3□□□□□ -0.44
TRAPPC3-210ENST00000617904 RBMY1EA6NEQ0 496 aaKnown RBP12.3□□□□□ -0.44
TRAPPC3-210ENST00000617904 CRXO43186 299 aaPredicted RBP12.3□□□□□ -0.44
TRAPPC3-210ENST00000617904 RBMY1DP0C7P1 496 aaKnown RBP12.3□□□□□ -0.44
TRAPPC3-210ENST00000617904 RNASE3P12724 160 aaKnown RBP12.3□□□□□ -0.44
TRAPPC3-210ENST00000617904 HTN1P15515 57 aa12.3□□□□□ -0.44
TRAPPC3-210ENST00000617904 AMN1Q8IY45 258 aa12.3□□□□□ -0.44
TRAPPC3-210ENST00000617904 HIST3H2BBQ8N257 126 aa12.3□□□□□ -0.44
TRAPPC3-210ENST00000617904 C9orf85Q96MD7 179 aa12.3□□□□□ -0.44
TRAPPC3-210ENST00000617904 HSBP1O75506 76 aa12.29□□□□□ -0.44
TRAPPC3-210ENST00000617904 NXPH4O95158 308 aa12.29□□□□□ -0.44
TRAPPC3-210ENST00000617904 IGLL1P15814 213 aa12.29□□□□□ -0.44
TRAPPC3-210ENST00000617904 PMCHP20382 165 aa12.29□□□□□ -0.44
TRAPPC3-210ENST00000617904 PIK3CD-AS1Q5SR53 167 aa12.29□□□□□ -0.44
TRAPPC3-210ENST00000617904 Q6ZQT7 251 aa12.29□□□□□ -0.44
TRAPPC3-210ENST00000617904 C18orf32Q8TCD1 76 aa12.29□□□□□ -0.44
TRAPPC3-210ENST00000617904 CHCHD1Q96BP2 118 aaKnown RBP12.29□□□□□ -0.44
TRAPPC3-210ENST00000617904 NDUFAF3Q9BU61 184 aa12.29□□□□□ -0.44
TRAPPC3-210ENST00000617904 RPL35AP18077 110 aaKnown RBP12.28□□□□□ -0.44
TRAPPC3-210ENST00000617904 RAB4AP20338 218 aa12.28□□□□□ -0.44
TRAPPC3-210ENST00000617904 APOC4P55056 127 aa12.28□□□□□ -0.44
TRAPPC3-210ENST00000617904 MRPL51Q4U2R6 128 aaKnown RBP12.28□□□□□ -0.44
TRAPPC3-210ENST00000617904 ZNF575Q86XF7 245 aa12.28□□□□□ -0.44
TRAPPC3-210ENST00000617904 PRSS3P2Q8NHM4 247 aa12.28□□□□□ -0.44
TRAPPC3-210ENST00000617904 PTH2Q96A98 100 aa12.28□□□□□ -0.44
TRAPPC3-210ENST00000617904 C19orf73Q9NVV2 129 aa12.28□□□□□ -0.44
TRAPPC3-210ENST00000617904 TP53TG3Q9ULZ0 132 aa12.28□□□□□ -0.44
TRAPPC3-210ENST00000617904 D6R8Y8 96 aa12.27□□□□□ -0.45
TRAPPC3-210ENST00000617904 ESDP10768 282 aa12.27□□□□□ -0.45
TRAPPC3-210ENST00000617904 EVI2AP22794 236 aa12.27□□□□□ -0.45
TRAPPC3-210ENST00000617904 FA2HQ7L5A8 372 aa12.27□□□□□ -0.45
TRAPPC3-210ENST00000617904 PACRGQ96M98 296 aaPredicted RBP12.27□□□□□ -0.45
TRAPPC3-210ENST00000617904 RCHY1Q96PM5 261 aa12.27□□□□□ -0.45
TRAPPC3-210ENST00000617904 CSTL1Q9H114 145 aa12.27□□□□□ -0.45
TRAPPC3-210ENST00000617904 MAP1LC3AQ9H492 121 aa12.27□□□□□ -0.45
TRAPPC3-210ENST00000617904 MSRB1Q9NZV6 116 aa12.27□□□□□ -0.45
TRAPPC3-210ENST00000617904 U3KQK5 164 aa12.27□□□□□ -0.45
TRAPPC3-210ENST00000617904 M0R2P5 195 aa12.26□□□□□ -0.45
TRAPPC3-210ENST00000617904 SERF1AO75920 110 aa12.26□□□□□ -0.45
TRAPPC3-210ENST00000617904 FABP4P15090 132 aa12.26□□□□□ -0.45
TRAPPC3-210ENST00000617904 PDZD11Q5EBL8 140 aa12.26□□□□□ -0.45
TRAPPC3-210ENST00000617904 RNASEKQ6P5S7 137 aaKnown RBP12.26□□□□□ -0.45
TRAPPC3-210ENST00000617904 IGHV3OR16-12A0A075B7B8 117 aa12.25□□□□□ -0.45
TRAPPC3-210ENST00000617904 A8MWV9 139 aa12.25□□□□□ -0.45
TRAPPC3-210ENST00000617904 K7EIL1 84 aa12.25□□□□□ -0.45
TRAPPC3-210ENST00000617904 MGPP08493 103 aa12.25□□□□□ -0.45
TRAPPC3-210ENST00000617904 ZNF876PQ49A33 203 aa12.25□□□□□ -0.45
TRAPPC3-210ENST00000617904 DEFB125Q8N687 156 aa12.25□□□□□ -0.45
TRAPPC3-210ENST00000617904 KIR2DL5BA0A0G2JN68 375 aa12.24□□□□□ -0.45
TRAPPC3-210ENST00000617904 KIR2DL5BA0A0G2JPC4 375 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 421.6 ms