RNA–Protein interactions for RNA: ENST00000617198.4

DDX1-207, Transcript of DEAD-box helicase 1, humanhuman

TSL 1 (best) BASIC

Gene DDX1, Length 2,257 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1-207ENST00000617198 USMG5Q96IX5 58 aa13.19□□□□□ -0.3
DDX1-207ENST00000617198 PRADC1Q9BSG0 188 aa13.19□□□□□ -0.3
DDX1-207ENST00000617198 TRBV7-9A0A0J9YWB2 115 aa13.18□□□□□ -0.3
DDX1-207ENST00000617198 POM121L12Q8N7R1 296 aa13.18□□□□□ -0.3
DDX1-207ENST00000617198 SCGB2A2Q13296 93 aa13.18□□□□□ -0.3
DDX1-207ENST00000617198 AMTNQ6UX39 209 aa13.18□□□□□ -0.3
DDX1-207ENST00000617198 BRD3OSQ6XYD6 125 aa13.18□□□□□ -0.3
DDX1-207ENST00000617198 IGHV3-11P01762 117 aa13.17□□□□□ -0.3
DDX1-207ENST00000617198 IGKV3-7A0A075B6H7 116 aa13.16□□□□□ -0.3
DDX1-207ENST00000617198 H3BUA1 57 aa13.16□□□□□ -0.3
DDX1-207ENST00000617198 NXPH4O95158 308 aa13.16□□□□□ -0.3
DDX1-207ENST00000617198 BRI3O95415 125 aa13.16□□□□□ -0.3
DDX1-207ENST00000617198 ZNF815PA8K554 130 aa13.16□□□□□ -0.3
DDX1-207ENST00000617198 J3QR89 54 aa13.16□□□□□ -0.3
DDX1-207ENST00000617198 HOXA3O43365 443 aaPredicted RBP13.16□□□□□ -0.3
DDX1-207ENST00000617198 GAGE13Q4V321 117 aa13.16□□□□□ -0.3
DDX1-207ENST00000617198 KIF25-AS1Q9Y6Z4 181 aa13.15□□□□□ -0.3
DDX1-207ENST00000617198 DUSP14O95147 198 aaKnown RBP13.15□□□□□ -0.3
DDX1-207ENST00000617198 MORN3Q6PF18 240 aaPredicted RBP13.15□□□□□ -0.3
DDX1-207ENST00000617198 RHPN1-AS1Q9BWJ2 59 aa13.15□□□□□ -0.3
DDX1-207ENST00000617198 SPTBN1Q01082 2364 aaKnown RBP13.14□□□□□ -0.31
DDX1-207ENST00000617198 IGHG2P01859 326 aa13.14□□□□□ -0.31
DDX1-207ENST00000617198 COX6B1P14854 86 aa13.14□□□□□ -0.31
DDX1-207ENST00000617198 LINC00315P59091 139 aa13.14□□□□□ -0.31
DDX1-207ENST00000617198 RPL32P62910 135 aaKnown RBP13.14□□□□□ -0.31
DDX1-207ENST00000617198 IGHV4OR15-8A0A075B7B6 117 aa13.14□□□□□ -0.31
DDX1-207ENST00000617198 A0A087WW49 117 aa13.14□□□□□ -0.31
DDX1-207ENST00000617198 TMEM238LA0A1B0GVL6 79 aa13.14□□□□□ -0.31
DDX1-207ENST00000617198 A6NJY4 79 aa13.14□□□□□ -0.31
DDX1-207ENST00000617198 CRYGDP07320 174 aa13.14□□□□□ -0.31
DDX1-207ENST00000617198 PF4V1P10720 104 aa13.14□□□□□ -0.31
DDX1-207ENST00000617198 LY6EQ16553 131 aa13.14□□□□□ -0.31
DDX1-207ENST00000617198 ETDBQ3ZM63 59 aa13.14□□□□□ -0.31
DDX1-207ENST00000617198 SCGB1D4Q6XE38 83 aa13.14□□□□□ -0.31
DDX1-207ENST00000617198 SH2D6Q7Z4S9 175 aa13.14□□□□□ -0.31
DDX1-207ENST00000617198 PRO0461Q9UI25 63 aa13.14□□□□□ -0.31
DDX1-207ENST00000617198 SAMD13Q5VXD3 122 aa13.13□□□□□ -0.31
DDX1-207ENST00000617198 ATRXP46100 2492 aa13.13□□□□□ -0.31
DDX1-207ENST00000617198 LINC01549A6NIU2 74 aa13.13□□□□□ -0.31
DDX1-207ENST00000617198 IGHV4-39P01824 125 aa13.13□□□□□ -0.31
DDX1-207ENST00000617198 CD300EQ496F6 205 aaPredicted RBP13.13□□□□□ -0.31
DDX1-207ENST00000617198 PGPEP1Q9NXJ5 209 aa13.13□□□□□ -0.31
DDX1-207ENST00000617198 TP53TG1Q9Y2A0 90 aa13.13□□□□□ -0.31
DDX1-207ENST00000617198 TSSC4Q9Y5U2 329 aaPredicted RBP13.13□□□□□ -0.31
DDX1-207ENST00000617198 ZFHX3Q15911 3703 aa13.12□□□□□ -0.31
DDX1-207ENST00000617198 KLLNB2CW77 178 aa13.12□□□□□ -0.31
DDX1-207ENST00000617198 TSHBP01222 138 aa13.12□□□□□ -0.31
DDX1-207ENST00000617198 PAPPA-AS1Q5QFB9 102 aa13.12□□□□□ -0.31
DDX1-207ENST00000617198 FAM159AQ6UWV7 190 aa13.12□□□□□ -0.31
DDX1-207ENST00000617198 PLEKHB2Q96CS7 222 aa13.12□□□□□ -0.31
DDX1-207ENST00000617198 DAZ1Q9NQZ3 744 aaKnown RBP13.12□□□□□ -0.31
DDX1-207ENST00000617198 COL6A6A6NMZ7 2263 aa13.12□□□□□ -0.31
DDX1-207ENST00000617198 MUC4Q99102 2169 aa13.12□□□□□ -0.31
DDX1-207ENST00000617198 IGIPA6NJ69 53 aa13.11□□□□□ -0.31
DDX1-207ENST00000617198 SRSF9Q13242 221 aaKnown RBP eCLIP13.11□□□□□ -0.31
DDX1-207ENST00000617198 MTURNQ8N3F0 131 aa13.11□□□□□ -0.31
DDX1-207ENST00000617198 SIGMAR1Q99720 223 aa13.11□□□□□ -0.31
DDX1-207ENST00000617198 MRPL16Q9NX20 251 aaKnown RBP13.11□□□□□ -0.31
DDX1-207ENST00000617198 IGLV4-69A0A075B6H9 119 aa13.11□□□□□ -0.31
DDX1-207ENST00000617198 GAGE12HA6NDE8 117 aa13.11□□□□□ -0.31
DDX1-207ENST00000617198 C11orf86A6NJI1 115 aa13.11□□□□□ -0.31
DDX1-207ENST00000617198 POLR2KP53803 58 aaKnown RBP13.11□□□□□ -0.31
DDX1-207ENST00000617198 ZFP2Q6ZN57 461 aa13.11□□□□□ -0.31
DDX1-207ENST00000617198 LCNL1Q6ZST4 164 aa13.11□□□□□ -0.31
DDX1-207ENST00000617198 SPAG8Q99932 426 aaPredicted RBP13.11□□□□□ -0.31
DDX1-207ENST00000617198 H3BUX3 64 aa13.1□□□□□ -0.31
DDX1-207ENST00000617198 KLHL30-AS1Q8NEE0 82 aa13.1□□□□□ -0.31
DDX1-207ENST00000617198 GTSF1LQ9H1H1 148 aa13.1□□□□□ -0.31
DDX1-207ENST00000617198 A6NDX4 124 aa13.1□□□□□ -0.31
DDX1-207ENST00000617198 IGHV4-38-2P0DP08 117 aa13.1□□□□□ -0.31
DDX1-207ENST00000617198 SRD5A1P18405 259 aa13.1□□□□□ -0.31
DDX1-207ENST00000617198 AZU1P20160 251 aa13.1□□□□□ -0.31
DDX1-207ENST00000617198 UBE2D1P51668 147 aa13.1□□□□□ -0.31
DDX1-207ENST00000617198 HERVK_113P61574 105 aa13.1□□□□□ -0.31
DDX1-207ENST00000617198 PMVKQ15126 192 aa13.1□□□□□ -0.31
DDX1-207ENST00000617198 SUMO4Q6EEV6 95 aa13.1□□□□□ -0.31
DDX1-207ENST00000617198 KIR2DL4Q99706 377 aa13.1□□□□□ -0.31
DDX1-207ENST00000617198 JPT2Q9H910 190 aa13.1□□□□□ -0.31
DDX1-207ENST00000617198 IGF2RP11717 2491 aa13.1□□□□□ -0.31
DDX1-207ENST00000617198 VCYO14598 125 aa13.09□□□□□ -0.31
DDX1-207ENST00000617198 C19orf84I3L1E1 186 aa13.09□□□□□ -0.31
DDX1-207ENST00000617198 BLCAPP62952 87 aa13.09□□□□□ -0.31
DDX1-207ENST00000617198 TMEM141Q96I45 108 aa13.09□□□□□ -0.31
DDX1-207ENST00000617198 HIVEP3Q5T1R4 2406 aa13.09□□□□□ -0.31
DDX1-207ENST00000617198 ABCA2Q9BZC7 2435 aa13.09□□□□□ -0.31
DDX1-207ENST00000617198 IGHV4-61A0A0C4DH41 118 aa13.08□□□□□ -0.32
DDX1-207ENST00000617198 IGLV1-40P01703 118 aa13.08□□□□□ -0.32
DDX1-207ENST00000617198 SCGB1A1P11684 91 aa13.08□□□□□ -0.32
DDX1-207ENST00000617198 ID1P41134 155 aa13.08□□□□□ -0.32
DDX1-207ENST00000617198 EMP1P54849 157 aa13.08□□□□□ -0.32
DDX1-207ENST00000617198 SPATA25Q9BR10 227 aa13.08□□□□□ -0.32
DDX1-207ENST00000617198 A0A087WWL8 130 aa13.08□□□□□ -0.32
DDX1-207ENST00000617198 Q6ZS46 218 aa13.08□□□□□ -0.32
DDX1-207ENST00000617198 TIMM17AQ99595 171 aa13.08□□□□□ -0.32
DDX1-207ENST00000617198 PIMREGQ9BSJ6 248 aa13.08□□□□□ -0.32
DDX1-207ENST00000617198 F5H697 171 aa13.07□□□□□ -0.32
DDX1-207ENST00000617198 CD7P09564 240 aa13.07□□□□□ -0.32
DDX1-207ENST00000617198 RPL39P62891 51 aaKnown RBP13.07□□□□□ -0.32
DDX1-207ENST00000617198 DEFB104AQ8WTQ1 72 aa13.07□□□□□ -0.32
DDX1-207ENST00000617198 DLX4Q92988 240 aaPredicted RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms