RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 COX19Q49B96 90 aa5.79□□□□□ -1.48
NEK3-207ENST00000617054 EBLN2Q6P2I7 272 aa5.79□□□□□ -1.48
NEK3-207ENST00000617054 STAB1Q9NY15 2570 aa5.78□□□□□ -1.48
NEK3-207ENST00000617054 PKD1L1Q8TDX9 2849 aa5.78□□□□□ -1.48
NEK3-207ENST00000617054 MRPL51Q4U2R6 128 aaKnown RBP5.78□□□□□ -1.48
NEK3-207ENST00000617054 OR10J3Q5JRS4 329 aa5.78□□□□□ -1.48
NEK3-207ENST00000617054 SPANXN1Q5VSR9 72 aa5.78□□□□□ -1.48
NEK3-207ENST00000617054 C16orf95Q9H693 158 aa5.78□□□□□ -1.48
NEK3-207ENST00000617054 TRAV21A0A0B4J279 112 aa5.78□□□□□ -1.48
NEK3-207ENST00000617054 SAP30O75446 220 aa5.78□□□□□ -1.48
NEK3-207ENST00000617054 SCGB1D1O95968 90 aa5.78□□□□□ -1.48
NEK3-207ENST00000617054 SCGB2A2Q13296 93 aa5.78□□□□□ -1.48
NEK3-207ENST00000617054 WFDC10AQ9H1F0 79 aa5.78□□□□□ -1.48
NEK3-207ENST00000617054 JPT2Q9H910 190 aa5.78□□□□□ -1.48
NEK3-207ENST00000617054 TCF21O43680 179 aa5.77□□□□□ -1.49
NEK3-207ENST00000617054 CTRLP40313 264 aa5.77□□□□□ -1.49
NEK3-207ENST00000617054 FAM104BQ5XKR9 115 aa5.77□□□□□ -1.49
NEK3-207ENST00000617054 KCNS1Q96KK3 526 aa5.77□□□□□ -1.49
NEK3-207ENST00000617054 CD7P09564 240 aa5.77□□□□□ -1.49
NEK3-207ENST00000617054 IFI27P40305 119 aaPredicted RBP5.77□□□□□ -1.49
NEK3-207ENST00000617054 RPS20P60866 119 aaKnown RBP5.77□□□□□ -1.49
NEK3-207ENST00000617054 KRTDAPP60985 99 aa5.77□□□□□ -1.49
NEK3-207ENST00000617054 S100A12P80511 92 aa5.77□□□□□ -1.49
NEK3-207ENST00000617054 FHL3Q13643 280 aa5.77□□□□□ -1.49
NEK3-207ENST00000617054 TDRG1Q3Y452 100 aa5.77□□□□□ -1.49
NEK3-207ENST00000617054 Q6AWC8 147 aa5.77□□□□□ -1.49
NEK3-207ENST00000617054 LINC00173Q6ZV60 143 aa5.77□□□□□ -1.49
NEK3-207ENST00000617054 MCRIP2Q9BUT9 160 aaKnown RBP5.77□□□□□ -1.49
NEK3-207ENST00000617054 MDFICQ9P1T7 246 aa5.77□□□□□ -1.49
NEK3-207ENST00000617054 MAST4O15021 2626 aa5.77□□□□□ -1.49
NEK3-207ENST00000617054 RBMY1BA6NDE4 496 aaKnown RBP5.77□□□□□ -1.49
NEK3-207ENST00000617054 RBMY1EA6NEQ0 496 aaKnown RBP5.77□□□□□ -1.49
NEK3-207ENST00000617054 KLLNB2CW77 178 aa5.77□□□□□ -1.49
NEK3-207ENST00000617054 ZNF324O75467 553 aaPredicted RBP5.77□□□□□ -1.49
NEK3-207ENST00000617054 HSBP1O75506 76 aa5.77□□□□□ -1.49
NEK3-207ENST00000617054 RBMY1DP0C7P1 496 aaKnown RBP5.77□□□□□ -1.49
NEK3-207ENST00000617054 RBMY1A1P0DJD3 496 aaKnown RBP5.77□□□□□ -1.49
NEK3-207ENST00000617054 RBMY1CP0DJD4 496 aa5.77□□□□□ -1.49
NEK3-207ENST00000617054 RNASE3P12724 160 aaKnown RBP5.77□□□□□ -1.49
NEK3-207ENST00000617054 CKS2P33552 79 aa5.77□□□□□ -1.49
NEK3-207ENST00000617054 RBMY1FQ15415 496 aaKnown RBP5.77□□□□□ -1.49
NEK3-207ENST00000617054 H0Y8G0 127 aa5.76□□□□□ -1.49
NEK3-207ENST00000617054 FOSL1P15407 271 aa5.76□□□□□ -1.49
NEK3-207ENST00000617054 BTF3P20290 206 aaKnown RBP5.76□□□□□ -1.49
NEK3-207ENST00000617054 RAB4AP20338 218 aa5.76□□□□□ -1.49
NEK3-207ENST00000617054 FAM159AQ6UWV7 190 aa5.76□□□□□ -1.49
NEK3-207ENST00000617054 C14orf178Q8N769 122 aaPredicted RBP5.76□□□□□ -1.49
NEK3-207ENST00000617054 RNF185Q96GF1 192 aa5.76□□□□□ -1.49
NEK3-207ENST00000617054 MAP6D1Q9H9H5 199 aa5.76□□□□□ -1.49
NEK3-207ENST00000617054 ZNF256Q9Y2P7 627 aaPredicted RBP5.76□□□□□ -1.49
NEK3-207ENST00000617054 LENEPQ9Y5L5 61 aa5.76□□□□□ -1.49
NEK3-207ENST00000617054 NACAE9PAV3 2078 aa5.76□□□□□ -1.49
NEK3-207ENST00000617054 NPYP01303 97 aa5.76□□□□□ -1.49
NEK3-207ENST00000617054 CDKN1BP46527 198 aa5.76□□□□□ -1.49
NEK3-207ENST00000617054 ZNF493Q6ZR52 646 aa5.76□□□□□ -1.49
NEK3-207ENST00000617054 PRELID3AQ96N28 172 aa5.76□□□□□ -1.49
NEK3-207ENST00000617054 PHLDA3Q9Y5J5 127 aa5.76□□□□□ -1.49
NEK3-207ENST00000617054 X6R8D5 127 aa5.76□□□□□ -1.49
NEK3-207ENST00000617054 LINC00614P0C842 121 aa5.75□□□□□ -1.49
NEK3-207ENST00000617054 AMTNQ6UX39 209 aa5.75□□□□□ -1.49
NEK3-207ENST00000617054 C7orf71A4D174 169 aa5.75□□□□□ -1.49
NEK3-207ENST00000617054 H3BMM0 161 aa5.75□□□□□ -1.49
NEK3-207ENST00000617054 ASIPP42127 132 aa5.75□□□□□ -1.49
NEK3-207ENST00000617054 JOSD1Q15040 202 aaPredicted RBP5.75□□□□□ -1.49
NEK3-207ENST00000617054 ATOH7Q8N100 152 aa5.75□□□□□ -1.49
NEK3-207ENST00000617054 Q8N1Y9 231 aa5.75□□□□□ -1.49
NEK3-207ENST00000617054 PRSS3P2Q8NHM4 247 aa5.75□□□□□ -1.49
NEK3-207ENST00000617054 IGHV3OR16-12A0A075B7B8 117 aa5.75□□□□□ -1.49
NEK3-207ENST00000617054 CRLF1O75462 422 aa5.75□□□□□ -1.49
NEK3-207ENST00000617054 ESDP10768 282 aa5.75□□□□□ -1.49
NEK3-207ENST00000617054 ODF3L2Q3SX64 289 aa5.75□□□□□ -1.49
NEK3-207ENST00000617054 FOXI2Q6ZQN5 318 aa5.75□□□□□ -1.49
NEK3-207ENST00000617054 TMEM191AQ9H0A3 160 aa5.75□□□□□ -1.49
NEK3-207ENST00000617054 A0A087WWL8 130 aa5.74□□□□□ -1.49
NEK3-207ENST00000617054 IGHV1-24A0A0C4DH33 117 aa5.74□□□□□ -1.49
NEK3-207ENST00000617054 CRXO43186 299 aaPredicted RBP5.74□□□□□ -1.49
NEK3-207ENST00000617054 ORMDL3Q8N138 153 aa5.74□□□□□ -1.49
NEK3-207ENST00000617054 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.74□□□□□ -1.49
NEK3-207ENST00000617054 CNFNQ9BYD5 112 aa5.74□□□□□ -1.49
NEK3-207ENST00000617054 SIGLEC8Q9NYZ4 499 aa5.74□□□□□ -1.49
NEK3-207ENST00000617054 XCL2Q9UBD3 114 aa5.74□□□□□ -1.49
NEK3-207ENST00000617054 COL6A5A8TX70 2615 aa5.74□□□□□ -1.49
NEK3-207ENST00000617054 RNASE8Q8TDE3 154 aaKnown RBP5.74□□□□□ -1.49
NEK3-207ENST00000617054 ANK2Q01484 3957 aa5.74□□□□□ -1.49
NEK3-207ENST00000617054 A0A1B0GW15 77 aa5.73□□□□□ -1.49
NEK3-207ENST00000617054 NDUFA7O95182 113 aa5.73□□□□□ -1.49
NEK3-207ENST00000617054 MGPP08493 103 aa5.73□□□□□ -1.49
NEK3-207ENST00000617054 OR5AL1P0C617 328 aa5.73□□□□□ -1.49
NEK3-207ENST00000617054 C3orf79P0CE67 100 aa5.73□□□□□ -1.49
NEK3-207ENST00000617054 SPATA12Q7Z6I5 190 aa5.73□□□□□ -1.49
NEK3-207ENST00000617054 SNAI2O43623 268 aa5.73□□□□□ -1.49
NEK3-207ENST00000617054 HLA-DRB4P13762 266 aa5.73□□□□□ -1.49
NEK3-207ENST00000617054 FAM74A4Q5TZK3 123 aa5.73□□□□□ -1.49
NEK3-207ENST00000617054 PMCHL2Q9BQD1 86 aa5.73□□□□□ -1.49
NEK3-207ENST00000617054 HLA-DRB4X5D2U9 266 aa5.73□□□□□ -1.49
NEK3-207ENST00000617054 SAMD13Q5VXD3 122 aa5.73□□□□□ -1.49
NEK3-207ENST00000617054 GATD1Q8NB37 220 aa5.73□□□□□ -1.49
NEK3-207ENST00000617054 C14orf144Q96I85 54 aa5.73□□□□□ -1.49
NEK3-207ENST00000617054 IGHV3-73A0A0B4J1V6 119 aa5.72□□□□□ -1.49
NEK3-207ENST00000617054 OR4C46A6NHA9 309 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms