RNA–Protein interactions for RNA: ENST00000616710.4

TNFRSF11A-205, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-205ENST00000616710 ZNF625Q96I27 306 aaPredicted RBP10.86□□□□□ -0.67
TNFRSF11A-205ENST00000616710 PPDPFQ9H3Y8 114 aa10.86□□□□□ -0.67
TNFRSF11A-205ENST00000616710 OTOGLQ3ZCN5 2332 aa10.86□□□□□ -0.67
TNFRSF11A-205ENST00000616710 C11orf86A6NJI1 115 aa10.86□□□□□ -0.67
TNFRSF11A-205ENST00000616710 K7EIM0 57 aa10.85□□□□□ -0.67
TNFRSF11A-205ENST00000616710 RNASE13Q5GAN3 156 aaKnown RBP10.85□□□□□ -0.67
TNFRSF11A-205ENST00000616710 IGHV3OR16-10A0A075B7F0 116 aa10.85□□□□□ -0.67
TNFRSF11A-205ENST00000616710 M0R2P5 195 aa10.85□□□□□ -0.67
TNFRSF11A-205ENST00000616710 OPRPNQ99935 248 aaPredicted RBP10.85□□□□□ -0.67
TNFRSF11A-205ENST00000616710 IGKV3OR2-268A0A0C4DH90 116 aa10.85□□□□□ -0.67
TNFRSF11A-205ENST00000616710 TMEM30BQ3MIR4 351 aa10.85□□□□□ -0.67
TNFRSF11A-205ENST00000616710 MDS2Q8NDY4 140 aa10.85□□□□□ -0.67
TNFRSF11A-205ENST00000616710 I3L2K1 104 aa10.84□□□□□ -0.67
TNFRSF11A-205ENST00000616710 NBR2O15453 112 aa10.84□□□□□ -0.67
TNFRSF11A-205ENST00000616710 CFC1BP0CG36 223 aa10.84□□□□□ -0.67
TNFRSF11A-205ENST00000616710 CFC1P0CG37 223 aa10.84□□□□□ -0.67
TNFRSF11A-205ENST00000616710 ATP5J2P56134 94 aa10.84□□□□□ -0.67
TNFRSF11A-205ENST00000616710 IGHV3-11P01762 117 aa10.84□□□□□ -0.67
TNFRSF11A-205ENST00000616710 LINC00477Q96M19 166 aa10.84□□□□□ -0.67
TNFRSF11A-205ENST00000616710 LHBP01229 141 aa10.84□□□□□ -0.67
TNFRSF11A-205ENST00000616710 BSPH1Q075Z2 132 aa10.84□□□□□ -0.67
TNFRSF11A-205ENST00000616710 AGPAT4-IT1Q9H0P7 198 aa10.84□□□□□ -0.67
TNFRSF11A-205ENST00000616710 DPM3Q9P2X0 92 aa10.84□□□□□ -0.67
TNFRSF11A-205ENST00000616710 FAM208BQ5VWN6 2430 aa10.84□□□□□ -0.67
TNFRSF11A-205ENST00000616710 KHDC1LQ5JSQ8 128 aa10.83□□□□□ -0.68
TNFRSF11A-205ENST00000616710 ATP6V0E2Q8NHE4 81 aa10.83□□□□□ -0.68
TNFRSF11A-205ENST00000616710 BAALCQ8WXS3 180 aa10.83□□□□□ -0.68
TNFRSF11A-205ENST00000616710 RBAKDNA6NC62 111 aa10.83□□□□□ -0.68
TNFRSF11A-205ENST00000616710 CRYGCP07315 174 aa10.83□□□□□ -0.68
TNFRSF11A-205ENST00000616710 CD7P09564 240 aa10.83□□□□□ -0.68
TNFRSF11A-205ENST00000616710 U3KQK5 164 aa10.83□□□□□ -0.68
TNFRSF11A-205ENST00000616710 SHISA9B4DS77 424 aa10.83□□□□□ -0.68
TNFRSF11A-205ENST00000616710 CLEC2BQ92478 149 aa10.83□□□□□ -0.68
TNFRSF11A-205ENST00000616710 DUX5Q96PT3 197 aa10.83□□□□□ -0.68
TNFRSF11A-205ENST00000616710 TNRC6BQ9UPQ9 1833 aaKnown RBP10.82□□□□□ -0.68
TNFRSF11A-205ENST00000616710 IGHV3-73A0A0B4J1V6 119 aa10.82□□□□□ -0.68
TNFRSF11A-205ENST00000616710 J3QQQ9 107 aa10.82□□□□□ -0.68
TNFRSF11A-205ENST00000616710 C22orf34Q6ZV56 151 aa10.82□□□□□ -0.68
TNFRSF11A-205ENST00000616710 C15orf32Q32M92 178 aa10.82□□□□□ -0.68
TNFRSF11A-205ENST00000616710 MUSTN1Q8IVN3 82 aa10.82□□□□□ -0.68
TNFRSF11A-205ENST00000616710 C1orf162Q8NEQ5 155 aaPredicted RBP10.82□□□□□ -0.68
TNFRSF11A-205ENST00000616710 LOC107984640A0A0U1RRK4 108 aa10.82□□□□□ -0.68
TNFRSF11A-205ENST00000616710 RHODO00212 210 aa10.82□□□□□ -0.68
TNFRSF11A-205ENST00000616710 LINC01559Q495D7 138 aa10.82□□□□□ -0.68
TNFRSF11A-205ENST00000616710 PAPPA-AS1Q5QFB9 102 aa10.82□□□□□ -0.68
TNFRSF11A-205ENST00000616710 CHD8Q9HCK8 2581 aa10.81□□□□□ -0.68
TNFRSF11A-205ENST00000616710 PF4V1P10720 104 aa10.81□□□□□ -0.68
TNFRSF11A-205ENST00000616710 LOXP28300 417 aaPredicted RBP10.81□□□□□ -0.68
TNFRSF11A-205ENST00000616710 LINC01620Q4KN68 170 aa10.81□□□□□ -0.68
TNFRSF11A-205ENST00000616710 DAND5Q8N907 189 aa10.81□□□□□ -0.68
TNFRSF11A-205ENST00000616710 TRGV11A0A075B6L2 103 aa10.81□□□□□ -0.68
TNFRSF11A-205ENST00000616710 TEX22C9J3V5 150 aa10.81□□□□□ -0.68
TNFRSF11A-205ENST00000616710 CD3EP07766 207 aa10.81□□□□□ -0.68
TNFRSF11A-205ENST00000616710 TMEM101Q96IK0 257 aa10.81□□□□□ -0.68
TNFRSF11A-205ENST00000616710 IGLV3-9A0A075B6K5 115 aa10.81□□□□□ -0.68
TNFRSF11A-205ENST00000616710 BUB1B-PAK6H3BSN5 160 aa10.81□□□□□ -0.68
TNFRSF11A-205ENST00000616710 EEF1AKMT3Q96AZ1 226 aa10.81□□□□□ -0.68
TNFRSF11A-205ENST00000616710 KLK5Q9Y337 293 aaPredicted RBP10.81□□□□□ -0.68
TNFRSF11A-205ENST00000616710 TRAV41A0A0B4J266 112 aa10.8□□□□□ -0.68
TNFRSF11A-205ENST00000616710 IGF1P05019 195 aa10.8□□□□□ -0.68
TNFRSF11A-205ENST00000616710 PDE6HQ13956 83 aa10.8□□□□□ -0.68
TNFRSF11A-205ENST00000616710 CSMD1Q96PZ7 3565 aa10.8□□□□□ -0.68
TNFRSF11A-205ENST00000616710 F6UB75 175 aa10.8□□□□□ -0.68
TNFRSF11A-205ENST00000616710 TMEM178BH3BS89 294 aa10.8□□□□□ -0.68
TNFRSF11A-205ENST00000616710 MRPS12O15235 138 aaKnown RBP10.8□□□□□ -0.68
TNFRSF11A-205ENST00000616710 GNRH2O43555 120 aa10.8□□□□□ -0.68
TNFRSF11A-205ENST00000616710 IGLC6P0CF74 106 aa10.8□□□□□ -0.68
TNFRSF11A-205ENST00000616710 RASL10AQ92737 203 aa10.8□□□□□ -0.68
TNFRSF11A-205ENST00000616710 DNAL4O96015 105 aa10.8□□□□□ -0.68
TNFRSF11A-205ENST00000616710 IGLV1-44P01699 117 aa10.8□□□□□ -0.68
TNFRSF11A-205ENST00000616710 DPH3P1Q9H4G8 78 aa10.8□□□□□ -0.68
TNFRSF11A-205ENST00000616710 CEACAM4O75871 244 aa10.79□□□□□ -0.68
TNFRSF11A-205ENST00000616710 GAGE2AQ6NT46 116 aa10.79□□□□□ -0.68
TNFRSF11A-205ENST00000616710 JPT2Q9H910 190 aa10.79□□□□□ -0.68
TNFRSF11A-205ENST00000616710 C11orf21Q9P2W6 132 aa10.79□□□□□ -0.68
TNFRSF11A-205ENST00000616710 SPTBN4Q9H254 2564 aa10.79□□□□□ -0.68
TNFRSF11A-205ENST00000616710 COL4A2P08572 1712 aa10.79□□□□□ -0.68
TNFRSF11A-205ENST00000616710 OOSP1A8MZH6 123 aa10.79□□□□□ -0.68
TNFRSF11A-205ENST00000616710 OR13C6PQ8NH95 151 aa10.79□□□□□ -0.68
TNFRSF11A-205ENST00000616710 CIRBPQ14011 172 aaKnown RBP10.78□□□□□ -0.68
TNFRSF11A-205ENST00000616710 CEP192Q8TEP8 1941 aa10.78□□□□□ -0.68
TNFRSF11A-205ENST00000616710 A0A0J9YY99 117 aa10.78□□□□□ -0.68
TNFRSF11A-205ENST00000616710 CD28P10747 220 aa10.78□□□□□ -0.68
TNFRSF11A-205ENST00000616710 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.78□□□□□ -0.68
TNFRSF11A-205ENST00000616710 PPP1R17O96001 155 aa10.78□□□□□ -0.68
TNFRSF11A-205ENST00000616710 ZMAT4Q9H898 229 aa10.78□□□□□ -0.68
TNFRSF11A-205ENST00000616710 HIST1H4AP62805 103 aaKnown RBP10.77□□□□□ -0.68
TNFRSF11A-205ENST00000616710 ZNF876PQ49A33 203 aa10.77□□□□□ -0.68
TNFRSF11A-205ENST00000616710 Q6ZSV7 163 aa10.77□□□□□ -0.68
TNFRSF11A-205ENST00000616710 ACACBO00763 2458 aa10.77□□□□□ -0.69
TNFRSF11A-205ENST00000616710 TRAV21A0A0B4J279 112 aa10.77□□□□□ -0.69
TNFRSF11A-205ENST00000616710 C10orf142B7Z368 130 aa10.77□□□□□ -0.69
TNFRSF11A-205ENST00000616710 NHLRC4P0CG21 123 aaPredicted RBP10.77□□□□□ -0.69
TNFRSF11A-205ENST00000616710 ANKRD11Q6UB99 2663 aaPredicted RBP10.77□□□□□ -0.69
TNFRSF11A-205ENST00000616710 TOMM7Q9P0U1 55 aa10.77□□□□□ -0.69
TNFRSF11A-205ENST00000616710 LINC00694P0DN24 101 aa10.76□□□□□ -0.69
TNFRSF11A-205ENST00000616710 LY6EQ16553 131 aa10.76□□□□□ -0.69
TNFRSF11A-205ENST00000616710 SMG1Q96Q15 3661 aaKnown RBP10.76□□□□□ -0.69
TNFRSF11A-205ENST00000616710 FAM110AQ9BQ89 295 aa10.76□□□□□ -0.69
TNFRSF11A-205ENST00000616710 SLC50A1Q9BRV3 221 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms